RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 CYFIP2Q96F07 1278 aa21.27■■□□□ 1
DNMT1-216ENST00000588952 TMEM30AQ9NV96 361 aa21.27■■□□□ 1
DNMT1-216ENST00000588952 ABI2Q9NYB9 513 aaPredicted RBP21.27■■□□□ 1
DNMT1-216ENST00000588952 AIPL1Q9NZN9 384 aa21.27■■□□□ 1
DNMT1-216ENST00000588952 NOCTQ9UK39 431 aaKnown RBP21.27■■□□□ 1
DNMT1-216ENST00000588952 PTPRDP23468 1912 aa21.27■■□□□ 1
DNMT1-216ENST00000588952 THAP12O43422 761 aa21.26■□□□□ 0.99
DNMT1-216ENST00000588952 EPCAMP16422 314 aa21.26■□□□□ 0.99
DNMT1-216ENST00000588952 ADORA2BP29275 332 aa21.26■□□□□ 0.99
DNMT1-216ENST00000588952 NRIP1P48552 1158 aa21.26■□□□□ 0.99
DNMT1-216ENST00000588952 RBM10P98175 930 aaKnown RBP21.26■□□□□ 0.99
DNMT1-216ENST00000588952 ADCY1Q08828 1119 aa21.26■□□□□ 0.99
DNMT1-216ENST00000588952 ARID5BQ14865 1188 aa21.26■□□□□ 0.99
DNMT1-216ENST00000588952 ASIC2Q16515 512 aa21.26■□□□□ 0.99
DNMT1-216ENST00000588952 GOLGA7BQ2TAP0 167 aa21.26■□□□□ 0.99
DNMT1-216ENST00000588952 SGO2Q562F6 1265 aa21.26■□□□□ 0.99
DNMT1-216ENST00000588952 FAM35AQ86V20 835 aa21.26■□□□□ 0.99
DNMT1-216ENST00000588952 TC2NQ8N9U0 490 aa21.26■□□□□ 0.99
DNMT1-216ENST00000588952 VN1R2Q8NFZ6 395 aa21.26■□□□□ 0.99
DNMT1-216ENST00000588952 ZNF461Q8TAF7 563 aa21.26■□□□□ 0.99
DNMT1-216ENST00000588952 OLIG1Q8TAK6 271 aa21.26■□□□□ 0.99
DNMT1-216ENST00000588952 EPS8L1Q8TE68 723 aa21.26■□□□□ 0.99
DNMT1-216ENST00000588952 DDX1Q92499 740 aaKnown RBP21.26■□□□□ 0.99
DNMT1-216ENST00000588952 GUCD1Q96NT3 240 aa21.26■□□□□ 0.99
DNMT1-216ENST00000588952 DNAJC7Q99615 494 aa21.26■□□□□ 0.99
DNMT1-216ENST00000588952 NSUN3Q9H649 340 aaKnown RBP21.26■□□□□ 0.99
DNMT1-216ENST00000588952 TLE6Q9H808 572 aa21.26■□□□□ 0.99
DNMT1-216ENST00000588952 AFF4Q9UHB7 1163 aaKnown RBP21.26■□□□□ 0.99
DNMT1-216ENST00000588952 AKR1B15C9JRZ8 316 aaPredicted RBP21.25■□□□□ 0.99
DNMT1-216ENST00000588952 SOAT2O75908 522 aa21.25■□□□□ 0.99
DNMT1-216ENST00000588952 SKILP12757 684 aa21.25■□□□□ 0.99
DNMT1-216ENST00000588952 FERP16591 822 aa21.25■□□□□ 0.99
DNMT1-216ENST00000588952 CHRNB2P17787 502 aa21.25■□□□□ 0.99
DNMT1-216ENST00000588952 POU3F3P20264 500 aaPredicted RBP21.25■□□□□ 0.99
DNMT1-216ENST00000588952 BDNFP23560 247 aa21.25■□□□□ 0.99
DNMT1-216ENST00000588952 CYP2F1P24903 491 aa21.25■□□□□ 0.99
DNMT1-216ENST00000588952 PTK2Q05397 1052 aa21.25■□□□□ 0.99
DNMT1-216ENST00000588952 HYAL1Q12794 435 aa21.25■□□□□ 0.99
DNMT1-216ENST00000588952 NFE2Q16621 373 aaPredicted RBP21.25■□□□□ 0.99
DNMT1-216ENST00000588952 TAF3Q5VWG9 929 aa21.25■□□□□ 0.99
DNMT1-216ENST00000588952 TPGS2Q68CL5 300 aa21.25■□□□□ 0.99
DNMT1-216ENST00000588952 TTC30AQ86WT1 665 aa21.25■□□□□ 0.99
DNMT1-216ENST00000588952 SPATA2LQ8IUW3 424 aaPredicted RBP21.25■□□□□ 0.99
DNMT1-216ENST00000588952 ZNF397Q8NF99 534 aaPredicted RBP21.25■□□□□ 0.99
DNMT1-216ENST00000588952 ZNF606Q8WXB4 792 aa21.25■□□□□ 0.99
DNMT1-216ENST00000588952 MYLIPQ8WY64 445 aa21.25■□□□□ 0.99
DNMT1-216ENST00000588952 HNRNPABQ99729 332 aaKnown RBP21.25■□□□□ 0.99
DNMT1-216ENST00000588952 MED10Q9BTT4 135 aa21.25■□□□□ 0.99
DNMT1-216ENST00000588952 ABHD10Q9NUJ1 306 aa21.25■□□□□ 0.99
DNMT1-216ENST00000588952 LMCD1Q9NZU5 365 aa21.25■□□□□ 0.99
DNMT1-216ENST00000588952 FBXW11Q9UKB1 542 aa21.25■□□□□ 0.99
DNMT1-216ENST00000588952 TSPAN16Q9UKR8 245 aa21.25■□□□□ 0.99
DNMT1-216ENST00000588952 KIAA1257Q9ULG3 409 aa21.25■□□□□ 0.99
DNMT1-216ENST00000588952 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.25■□□□□ 0.99
DNMT1-216ENST00000588952 SLC27A5Q9Y2P5 690 aa21.25■□□□□ 0.99
DNMT1-216ENST00000588952 PCDHB5Q9Y5E4 795 aa21.25■□□□□ 0.99
DNMT1-216ENST00000588952 MICAL2O94851 1124 aa21.24■□□□□ 0.99
DNMT1-216ENST00000588952 GLUD1P00367 558 aa21.24■□□□□ 0.99
DNMT1-216ENST00000588952 TPM1P09493 284 aa21.24■□□□□ 0.99
DNMT1-216ENST00000588952 ATF2P15336 505 aa21.24■□□□□ 0.99
DNMT1-216ENST00000588952 IGFBP4P22692 258 aa21.24■□□□□ 0.99
DNMT1-216ENST00000588952 GPR15P49685 360 aa21.24■□□□□ 0.99
DNMT1-216ENST00000588952 DUSP4Q13115 394 aa21.24■□□□□ 0.99
DNMT1-216ENST00000588952 MAPRE1Q15691 268 aaKnown RBP21.24■□□□□ 0.99
DNMT1-216ENST00000588952 HGSNATQ68CP4 663 aa21.24■□□□□ 0.99
DNMT1-216ENST00000588952 LLGL2Q6P1M3 1020 aa21.24■□□□□ 0.99
DNMT1-216ENST00000588952 DENND1BQ6P3S1 775 aa21.24■□□□□ 0.99
DNMT1-216ENST00000588952 WDR59Q6PJI9 974 aa21.24■□□□□ 0.99
DNMT1-216ENST00000588952 C4orf50Q6ZRC1 276 aa21.24■□□□□ 0.99
DNMT1-216ENST00000588952 SYN2Q92777 582 aaPredicted RBP21.24■□□□□ 0.99
DNMT1-216ENST00000588952 CDX2Q99626 313 aaPredicted RBP21.24■□□□□ 0.99
DNMT1-216ENST00000588952 SYT11Q9BT88 431 aa21.24■□□□□ 0.99
DNMT1-216ENST00000588952 KRT82Q9NSB4 513 aa21.24■□□□□ 0.99
DNMT1-216ENST00000588952 PRRC2BQ5JSZ5 2229 aaKnown RBP21.23■□□□□ 0.99
DNMT1-216ENST00000588952 BEST1O76090 585 aa21.23■□□□□ 0.99
DNMT1-216ENST00000588952 MMEP08473 750 aa21.23■□□□□ 0.99
DNMT1-216ENST00000588952 HNRNPH3P31942 346 aaKnown RBP21.23■□□□□ 0.99
DNMT1-216ENST00000588952 PRKCIP41743 596 aa21.23■□□□□ 0.99
DNMT1-216ENST00000588952 PDE6CP51160 858 aa21.23■□□□□ 0.99
DNMT1-216ENST00000588952 BPIFB4P59827 614 aa21.23■□□□□ 0.99
DNMT1-216ENST00000588952 SMARCB1Q12824 385 aa21.23■□□□□ 0.99
DNMT1-216ENST00000588952 KCNC3Q14003 757 aa21.23■□□□□ 0.99
DNMT1-216ENST00000588952 CNGA2Q16280 664 aa21.23■□□□□ 0.99
DNMT1-216ENST00000588952 CFAP221Q4G0U5 840 aa21.23■□□□□ 0.99
DNMT1-216ENST00000588952 PKDCCQ504Y2 493 aa21.23■□□□□ 0.99
DNMT1-216ENST00000588952 LCLAT1Q6UWP7 414 aa21.23■□□□□ 0.99
DNMT1-216ENST00000588952 CNGA4Q8IV77 575 aa21.23■□□□□ 0.99
DNMT1-216ENST00000588952 DEFB123Q8N688 67 aa21.23■□□□□ 0.99
DNMT1-216ENST00000588952 OR8K1Q8NGG5 319 aa21.23■□□□□ 0.99
DNMT1-216ENST00000588952 SPPL2BQ8TCT7 592 aa21.23■□□□□ 0.99
DNMT1-216ENST00000588952 FUBP3Q96I24 572 aaKnown RBP eCLIP21.23■□□□□ 0.99
DNMT1-216ENST00000588952 SMOQ99835 787 aa21.23■□□□□ 0.99
DNMT1-216ENST00000588952 DNAI2Q9GZS0 605 aa21.23■□□□□ 0.99
DNMT1-216ENST00000588952 NUCKS1Q9H1E3 243 aaKnown RBP21.23■□□□□ 0.99
DNMT1-216ENST00000588952 IGFLR1Q9H665 355 aa21.23■□□□□ 0.99
DNMT1-216ENST00000588952 CYP4F11Q9HBI6 524 aa21.23■□□□□ 0.99
DNMT1-216ENST00000588952 ABCB6Q9NP58 842 aa21.23■□□□□ 0.99
DNMT1-216ENST00000588952 IMPACTQ9P2X3 320 aa21.23■□□□□ 0.99
DNMT1-216ENST00000588952 HCFC2Q9Y5Z7 792 aa21.23■□□□□ 0.99
DNMT1-216ENST00000588952 REV3LO60673 3130 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms