RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 KIAA1468Q9P260 1216 aa12.37□□□□□ -0.43
RFX1-204ENST00000588885 CGNQ9P2M7 1197 aaKnown RBP12.37□□□□□ -0.43
RFX1-204ENST00000588885 HSFX1Q9UBD0 423 aa12.37□□□□□ -0.43
RFX1-204ENST00000588885 NXF1Q9UBU9 619 aaKnown RBP12.37□□□□□ -0.43
RFX1-204ENST00000588885 HOOK1Q9UJC3 728 aaKnown RBP12.37□□□□□ -0.43
RFX1-204ENST00000588885 MAN1B1Q9UKM7 699 aa12.37□□□□□ -0.43
RFX1-204ENST00000588885 PCDHA5Q9Y5H7 936 aa12.37□□□□□ -0.43
RFX1-204ENST00000588885 NCANO14594 1321 aa12.37□□□□□ -0.43
RFX1-204ENST00000588885 ZNF638Q14966 1978 aaKnown RBP12.36□□□□□ -0.43
RFX1-204ENST00000588885 PTPRZ1P23471 2315 aaPredicted RBP12.36□□□□□ -0.43
RFX1-204ENST00000588885 FAM170BA6NMN3 283 aa12.36□□□□□ -0.43
RFX1-204ENST00000588885 GABRDO14764 452 aa12.36□□□□□ -0.43
RFX1-204ENST00000588885 MAP3K13O43283 966 aa12.36□□□□□ -0.43
RFX1-204ENST00000588885 NR3C1P04150 777 aa12.36□□□□□ -0.43
RFX1-204ENST00000588885 GLULP15104 373 aa12.36□□□□□ -0.43
RFX1-204ENST00000588885 PCSK1P29120 753 aa12.36□□□□□ -0.43
RFX1-204ENST00000588885 GNL1P36915 607 aaPredicted RBP12.36□□□□□ -0.43
RFX1-204ENST00000588885 STARD6P59095 220 aa12.36□□□□□ -0.43
RFX1-204ENST00000588885 DLG4P78352 724 aa12.36□□□□□ -0.43
RFX1-204ENST00000588885 SMARCB1Q12824 385 aa12.36□□□□□ -0.43
RFX1-204ENST00000588885 NFE2Q16621 373 aaPredicted RBP12.36□□□□□ -0.43
RFX1-204ENST00000588885 WDR72Q3MJ13 1102 aa12.36□□□□□ -0.43
RFX1-204ENST00000588885 ARHGAP15Q53QZ3 475 aa12.36□□□□□ -0.43
RFX1-204ENST00000588885 CEP135Q66GS9 1140 aa12.36□□□□□ -0.43
RFX1-204ENST00000588885 PHLDB3Q6NSJ2 640 aa12.36□□□□□ -0.43
RFX1-204ENST00000588885 TPRG1Q6ZUI0 275 aa12.36□□□□□ -0.43
RFX1-204ENST00000588885 YAF2Q8IY57 180 aa12.36□□□□□ -0.43
RFX1-204ENST00000588885 OR6B3Q8NGW1 331 aa12.36□□□□□ -0.43
RFX1-204ENST00000588885 TTC8Q8TAM2 541 aa12.36□□□□□ -0.43
RFX1-204ENST00000588885 SMARCE1Q969G3 411 aa12.36□□□□□ -0.43
RFX1-204ENST00000588885 CCDC47Q96A33 483 aaKnown RBP12.36□□□□□ -0.43
RFX1-204ENST00000588885 LRRC3BQ96PB8 259 aa12.36□□□□□ -0.43
RFX1-204ENST00000588885 PKMYT1Q99640 499 aa12.36□□□□□ -0.43
RFX1-204ENST00000588885 SYT15Q9BQS2 421 aa12.36□□□□□ -0.43
RFX1-204ENST00000588885 GPR88Q9GZN0 384 aa12.36□□□□□ -0.43
RFX1-204ENST00000588885 SNX25Q9H3E2 840 aa12.36□□□□□ -0.43
RFX1-204ENST00000588885 IL21Q9HBE4 155 aa12.36□□□□□ -0.43
RFX1-204ENST00000588885 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.36□□□□□ -0.436e-9■■■■■ 134.6
RFX1-204ENST00000588885 DMAC2Q9NW81 257 aa12.36□□□□□ -0.43
RFX1-204ENST00000588885 KANSL1LA0AUZ9 987 aa12.35□□□□□ -0.43
RFX1-204ENST00000588885 LRRIQ3A6PVS8 624 aaPredicted RBP12.35□□□□□ -0.43
RFX1-204ENST00000588885 PDXKO00764 312 aa12.35□□□□□ -0.43
RFX1-204ENST00000588885 DPYSL4O14531 572 aa12.35□□□□□ -0.43
RFX1-204ENST00000588885 ZNF263O14978 683 aa12.35□□□□□ -0.43
RFX1-204ENST00000588885 SMC2O95347 1197 aa12.35□□□□□ -0.43
RFX1-204ENST00000588885 FGF19O95750 216 aa12.35□□□□□ -0.43
RFX1-204ENST00000588885 MYL1P05976 194 aa12.35□□□□□ -0.43
RFX1-204ENST00000588885 HMGA1P17096 107 aaKnown RBP12.35□□□□□ -0.43
RFX1-204ENST00000588885 PSMC3P17980 439 aa12.35□□□□□ -0.43
RFX1-204ENST00000588885 WARSP23381 471 aaKnown RBP12.35□□□□□ -0.43
RFX1-204ENST00000588885 TNNC1P63316 161 aa12.35□□□□□ -0.43
RFX1-204ENST00000588885 CYP27A1Q02318 531 aa12.35□□□□□ -0.43
RFX1-204ENST00000588885 PRKCQQ04759 706 aa12.35□□□□□ -0.43
RFX1-204ENST00000588885 ANGPT1Q15389 498 aa12.35□□□□□ -0.43
RFX1-204ENST00000588885 STX1AQ16623 288 aa12.35□□□□□ -0.43
RFX1-204ENST00000588885 TDRD10Q5VZ19 366 aaKnown RBP12.35□□□□□ -0.43
RFX1-204ENST00000588885 LIMS2Q7Z4I7 341 aa12.35□□□□□ -0.43
RFX1-204ENST00000588885 FRMD5Q7Z6J6 570 aa12.35□□□□□ -0.43
RFX1-204ENST00000588885 MFSD6LQ8IWD5 586 aa12.35□□□□□ -0.43
RFX1-204ENST00000588885 SMYD4Q8IYR2 804 aaPredicted RBP12.35□□□□□ -0.43
RFX1-204ENST00000588885 SPATA20Q8TB22 786 aa12.35□□□□□ -0.43
RFX1-204ENST00000588885 PARD3BQ8TEW8 1205 aa12.35□□□□□ -0.43
RFX1-204ENST00000588885 NKD2Q969F2 451 aaPredicted RBP12.35□□□□□ -0.43
RFX1-204ENST00000588885 MYLPFQ96A32 169 aa12.35□□□□□ -0.43
RFX1-204ENST00000588885 ZFYVE19Q96K21 471 aa12.35□□□□□ -0.43
RFX1-204ENST00000588885 GCNAQ96QF7 691 aa12.35□□□□□ -0.43
RFX1-204ENST00000588885 MKNK1Q9BUB5 465 aa12.35□□□□□ -0.43
RFX1-204ENST00000588885 SLC46A2Q9BY10 475 aa12.35□□□□□ -0.43
RFX1-204ENST00000588885 TSPY26PQ9H489 355 aa12.35□□□□□ -0.43
RFX1-204ENST00000588885 TRPV4Q9HBA0 871 aa12.35□□□□□ -0.43
RFX1-204ENST00000588885 CRTAC1Q9NQ79 661 aa12.35□□□□□ -0.43
RFX1-204ENST00000588885 MAGEC2Q9UBF1 373 aaPredicted RBP12.35□□□□□ -0.43
RFX1-204ENST00000588885 FAM186AA6NE01 2351 aa12.35□□□□□ -0.43
RFX1-204ENST00000588885 SLC38A8A6NNN8 435 aa12.34□□□□□ -0.43
RFX1-204ENST00000588885 CALUO43852 315 aaPredicted RBP12.34□□□□□ -0.43
RFX1-204ENST00000588885 RHOBTB3O94955 611 aa12.34□□□□□ -0.43
RFX1-204ENST00000588885 PRAMEF12O95522 483 aa12.34□□□□□ -0.43
RFX1-204ENST00000588885 CCDC192P0DO97 292 aa12.34□□□□□ -0.43
RFX1-204ENST00000588885 BDNFP23560 247 aa12.34□□□□□ -0.43
RFX1-204ENST00000588885 CDC25CP30307 473 aa12.34□□□□□ -0.43
RFX1-204ENST00000588885 RAP1GAPP47736 663 aa12.34□□□□□ -0.43
RFX1-204ENST00000588885 CDH8P55286 799 aa12.34□□□□□ -0.43
RFX1-204ENST00000588885 NLRP12P59046 1061 aa12.34□□□□□ -0.43
RFX1-204ENST00000588885 RPL10AP62906 217 aaKnown RBP12.34□□□□□ -0.43
RFX1-204ENST00000588885 DPCR1Q3MIW9 517 aa12.34□□□□□ -0.43
RFX1-204ENST00000588885 MDH1BQ5I0G3 518 aa12.34□□□□□ -0.43
RFX1-204ENST00000588885 TXNDC8Q6A555 127 aa12.34□□□□□ -0.43
RFX1-204ENST00000588885 ISM2Q6H9L7 571 aa12.34□□□□□ -0.43
RFX1-204ENST00000588885 FAM171BQ6P995 826 aa12.34□□□□□ -0.43
RFX1-204ENST00000588885 SASS6Q6UVJ0 657 aa12.34□□□□□ -0.43
RFX1-204ENST00000588885 SCARA5Q6ZMJ2 495 aa12.34□□□□□ -0.43
RFX1-204ENST00000588885 C11orf57Q6ZUT1 292 aaPredicted RBP12.34□□□□□ -0.43
RFX1-204ENST00000588885 DPH6Q7L8W6 267 aa12.34□□□□□ -0.43
RFX1-204ENST00000588885 TMEM150AQ86TG1 271 aa12.34□□□□□ -0.43
RFX1-204ENST00000588885 GAS2L3Q86XJ1 694 aa12.34□□□□□ -0.43
RFX1-204ENST00000588885 MAB21L3Q8N8X9 362 aa12.34□□□□□ -0.43
RFX1-204ENST00000588885 TTC16Q8NEE8 873 aa12.34□□□□□ -0.43
RFX1-204ENST00000588885 PJA1Q8NG27 643 aa12.34□□□□□ -0.43
RFX1-204ENST00000588885 IRF7Q92985 503 aa12.34□□□□□ -0.43
RFX1-204ENST00000588885 HINFPQ9BQA5 517 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms