RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 CXCL12P48061 93 aa15.37■□□□□ 0.05
VMP1-206ENST00000587945 CCR3P51677 355 aa15.37■□□□□ 0.05
VMP1-206ENST00000587945 PLCB2Q00722 1185 aa15.37■□□□□ 0.05
VMP1-206ENST00000587945 EHHADHQ08426 723 aa15.37■□□□□ 0.05
VMP1-206ENST00000587945 DMWDQ09019 674 aa15.37■□□□□ 0.05
VMP1-206ENST00000587945 CUL4BQ13620 913 aa15.37■□□□□ 0.05
VMP1-206ENST00000587945 LRRC32Q14392 662 aa15.37■□□□□ 0.05
VMP1-206ENST00000587945 SURF1Q15526 300 aa15.37■□□□□ 0.05
VMP1-206ENST00000587945 SNRNP35Q16560 246 aaKnown RBP15.37■□□□□ 0.05
VMP1-206ENST00000587945 RESP18Q5W5W9 173 aa15.37■□□□□ 0.05
VMP1-206ENST00000587945 MAMSTRQ6ZN01 415 aa15.37■□□□□ 0.05
VMP1-206ENST00000587945 TRAPPC11Q7Z392 1133 aa15.37■□□□□ 0.05
VMP1-206ENST00000587945 LIMS2Q7Z4I7 341 aa15.37■□□□□ 0.05
VMP1-206ENST00000587945 MON1AQ86VX9 555 aa15.37■□□□□ 0.05
VMP1-206ENST00000587945 WDR49Q8IV35 697 aa15.37■□□□□ 0.05
VMP1-206ENST00000587945 SPATA18Q8TC71 538 aa15.37■□□□□ 0.05
VMP1-206ENST00000587945 MRPS31Q92665 395 aaKnown RBP15.37■□□□□ 0.05
VMP1-206ENST00000587945 CCDC127Q96BQ5 260 aa15.37■□□□□ 0.05
VMP1-206ENST00000587945 RMDN1Q96DB5 314 aa15.37■□□□□ 0.05
VMP1-206ENST00000587945 SYT15Q9BQS2 421 aa15.37■□□□□ 0.05
VMP1-206ENST00000587945 IER2Q9BTL4 223 aa15.37■□□□□ 0.05
VMP1-206ENST00000587945 KIAA1586Q9HCI6 787 aa15.37■□□□□ 0.05
VMP1-206ENST00000587945 SLC39A2Q9NP94 309 aa15.37■□□□□ 0.05
VMP1-206ENST00000587945 HPS4Q9NQG7 708 aa15.37■□□□□ 0.05
VMP1-206ENST00000587945 C2orf42Q9NWW7 574 aa15.37■□□□□ 0.05
VMP1-206ENST00000587945 THG1LQ9NWX6 298 aaKnown RBP15.37■□□□□ 0.05
VMP1-206ENST00000587945 NCDNQ9UBB6 729 aa15.37■□□□□ 0.05
VMP1-206ENST00000587945 ANK1P16157 1881 aa15.37■□□□□ 0.05
VMP1-206ENST00000587945 OTOL1A6NHN0 477 aaPredicted RBP15.36■□□□□ 0.05
VMP1-206ENST00000587945 ARSAP15289 507 aa15.36■□□□□ 0.05
VMP1-206ENST00000587945 TNNI1P19237 187 aa15.36■□□□□ 0.05
VMP1-206ENST00000587945 DDX6P26196 483 aaKnown RBP eCLIP15.36■□□□□ 0.05
VMP1-206ENST00000587945 DNM1Q05193 864 aaKnown RBP15.36■□□□□ 0.05
VMP1-206ENST00000587945 CYP24A1Q07973 514 aa15.36■□□□□ 0.05
VMP1-206ENST00000587945 LPAL2Q16609 132 aa15.36■□□□□ 0.05
VMP1-206ENST00000587945 ITPRIPL2Q3MIP1 535 aa15.36■□□□□ 0.05
VMP1-206ENST00000587945 CFAP221Q4G0U5 840 aa15.36■□□□□ 0.05
VMP1-206ENST00000587945 FAM171BQ6P995 826 aa15.36■□□□□ 0.05
VMP1-206ENST00000587945 C1orf228Q6PIY5 440 aa15.36■□□□□ 0.05
VMP1-206ENST00000587945 TTC16Q8NEE8 873 aa15.36■□□□□ 0.05
VMP1-206ENST00000587945 MYLPFQ96A32 169 aa15.36■□□□□ 0.05
VMP1-206ENST00000587945 CYP2S1Q96SQ9 504 aa15.36■□□□□ 0.05
VMP1-206ENST00000587945 MMS19Q96T76 1030 aa15.36■□□□□ 0.05
VMP1-206ENST00000587945 FAM83CQ9BQN1 747 aa15.36■□□□□ 0.05
VMP1-206ENST00000587945 MRPL45Q9BRJ2 306 aaKnown RBP15.36■□□□□ 0.05
VMP1-206ENST00000587945 FAM126AQ9BYI3 521 aaPredicted RBP15.36■□□□□ 0.05
VMP1-206ENST00000587945 EPC1Q9H2F5 836 aa15.36■□□□□ 0.05
VMP1-206ENST00000587945 EBF3Q9H4W6 596 aa15.36■□□□□ 0.05
VMP1-206ENST00000587945 MAGEF1Q9HAY2 307 aa15.36■□□□□ 0.05
VMP1-206ENST00000587945 TRPC7Q9HCX4 862 aa15.36■□□□□ 0.05
VMP1-206ENST00000587945 CRTAC1Q9NQ79 661 aa15.36■□□□□ 0.05
VMP1-206ENST00000587945 TDP1Q9NUW8 608 aa15.36■□□□□ 0.05
VMP1-206ENST00000587945 FAM13BQ9NYF5 915 aa15.36■□□□□ 0.05
VMP1-206ENST00000587945 NME7Q9Y5B8 376 aa15.36■□□□□ 0.05
VMP1-206ENST00000587945 MIA3Q5JRA6 1907 aa15.36■□□□□ 0.05
VMP1-206ENST00000587945 COL4A2P08572 1712 aa15.36■□□□□ 0.05
VMP1-206ENST00000587945 OTOGLQ3ZCN5 2332 aa15.35■□□□□ 0.05
VMP1-206ENST00000587945 CHURC1-FNTBB4DL54 471 aa15.35■□□□□ 0.05
VMP1-206ENST00000587945 WARSP23381 471 aaKnown RBP15.35■□□□□ 0.05
VMP1-206ENST00000587945 BDNFP23560 247 aa15.35■□□□□ 0.05
VMP1-206ENST00000587945 FNTBP49356 437 aa15.35■□□□□ 0.05
VMP1-206ENST00000587945 CCINQ13939 588 aa15.35■□□□□ 0.05
VMP1-206ENST00000587945 PPP2R5DQ14738 602 aa15.35■□□□□ 0.05
VMP1-206ENST00000587945 PSMD6Q15008 389 aa15.35■□□□□ 0.05
VMP1-206ENST00000587945 DPH6Q7L8W6 267 aa15.35■□□□□ 0.05
VMP1-206ENST00000587945 SPEM1Q8N4L4 309 aa15.35■□□□□ 0.05
VMP1-206ENST00000587945 XXYLT1Q8NBI6 393 aa15.35■□□□□ 0.05
VMP1-206ENST00000587945 ZNF516Q92618 1163 aa15.35■□□□□ 0.05
VMP1-206ENST00000587945 CHFRQ96EP1 664 aa15.35■□□□□ 0.05
VMP1-206ENST00000587945 FUBP3Q96I24 572 aaKnown RBP eCLIP15.35■□□□□ 0.05
VMP1-206ENST00000587945 CHAMP1Q96JM3 812 aa15.35■□□□□ 0.05
VMP1-206ENST00000587945 MYRFLQ96LU7 910 aa15.35■□□□□ 0.05
VMP1-206ENST00000587945 FNBP1Q96RU3 617 aa15.35■□□□□ 0.05
VMP1-206ENST00000587945 SLC22A12Q96S37 553 aa15.35■□□□□ 0.05
VMP1-206ENST00000587945 CGRRF1Q99675 332 aa15.35■□□□□ 0.05
VMP1-206ENST00000587945 GZF1Q9H116 711 aaPredicted RBP15.35■□□□□ 0.05
VMP1-206ENST00000587945 MAGEC2Q9UBF1 373 aaPredicted RBP15.35■□□□□ 0.05
VMP1-206ENST00000587945 UXTQ9UBK9 157 aaPredicted RBP15.35■□□□□ 0.05
VMP1-206ENST00000587945 SERTAD1Q9UHV2 236 aa15.35■□□□□ 0.05
VMP1-206ENST00000587945 ZMYM5Q9UJ78 669 aa15.35■□□□□ 0.05
VMP1-206ENST00000587945 CDH9Q9ULB4 789 aa15.35■□□□□ 0.05
VMP1-206ENST00000587945 SPTBN4Q9H254 2564 aa15.35■□□□□ 0.05
VMP1-206ENST00000587945 WDR87Q6ZQQ6 2873 aa15.35■□□□□ 0.05
VMP1-206ENST00000587945 DCHS1Q96JQ0 3298 aa15.34■□□□□ 0.05
VMP1-206ENST00000587945 CASP4P49662 377 aa15.34■□□□□ 0.05
VMP1-206ENST00000587945 NRLP54845 237 aa15.34■□□□□ 0.05
VMP1-206ENST00000587945 CYP27A1Q02318 531 aa15.34■□□□□ 0.05
VMP1-206ENST00000587945 RUNX3Q13761 415 aa15.34■□□□□ 0.05
VMP1-206ENST00000587945 BMT2Q1RMZ1 405 aa15.34■□□□□ 0.05
VMP1-206ENST00000587945 DGKKQ5KSL6 1271 aa15.34■□□□□ 0.05
VMP1-206ENST00000587945 NAIF1Q69YI7 327 aaPredicted RBP15.34■□□□□ 0.05
VMP1-206ENST00000587945 HEATR6Q6AI08 1181 aaKnown RBP15.34■□□□□ 0.05
VMP1-206ENST00000587945 C4orf50Q6ZRC1 276 aa15.34■□□□□ 0.05
VMP1-206ENST00000587945 HS2ST1Q7LGA3 356 aa15.34■□□□□ 0.05
VMP1-206ENST00000587945 TRMT2BQ96GJ1 504 aaKnown RBP15.34■□□□□ 0.05
VMP1-206ENST00000587945 RCOR1Q9UKL0 485 aa15.34■□□□□ 0.05
VMP1-206ENST00000587945 TICRRQ7Z2Z1 1910 aa15.34■□□□□ 0.05
VMP1-206ENST00000587945 UBE4BO95155 1302 aa15.34■□□□□ 0.05
VMP1-206ENST00000587945 PVALEFA0A1B0GWK0 134 aa15.33■□□□□ 0.04
VMP1-206ENST00000587945 C2orf78A6NCI8 922 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms