RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 TUFMP49411 452 aaKnown RBP10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 RABGGTBP53611 331 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 CCZ1BP86790 482 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 CCZ1P86791 482 aaPredicted RBP10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 FMO1Q01740 532 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 CENPCQ03188 943 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 RAB33AQ14088 237 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 CLEC16AQ2KHT3 1053 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 RTP2Q5QGT7 225 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 E4F1Q66K89 784 aaPredicted RBP10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 ALKBH5Q6P6C2 394 aaKnown RBP10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 TMC7Q7Z402 723 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 ZDHHC17Q8IUH5 632 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 GLYCTKQ8IVS8 523 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 SLC30A5Q8TAD4 765 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 ZNF461Q8TAF7 563 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 SPPL3Q8TCT6 385 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 IPO4Q8TEX9 1081 aaKnown RBP10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 TIFAQ96CG3 184 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 HSFY1Q96LI6 401 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 TWNKQ96RR1 684 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 PKMYT1Q99640 499 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 RTP3Q9BQQ7 232 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 DUSP16Q9BY84 665 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 TSGA10Q9BZW7 698 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 DMAP1Q9NPF5 467 aaPredicted RBP10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 ENTPD7Q9NQZ7 604 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 TMEM51Q9NW97 253 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 COMMD8Q9NX08 183 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 WDR35Q9P2L0 1181 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 HMGXB4Q9UGU5 601 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 AFF4Q9UHB7 1163 aaKnown RBP10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 ADAMTS1Q9UHI8 967 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 NAGPAQ9UK23 515 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 TSPAN16Q9UKR8 245 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 TIMM13Q9Y5L4 95 aaPredicted RBP10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 PLXNA4Q9HCM2 1894 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 M0QYV0 167 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 XPO1O14980 1071 aaKnown RBP10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 SART1O43290 800 aaKnown RBP10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 LILRB3O75022 631 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 MMEP08473 750 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 PNMA6AP0CW24 399 aaPredicted RBP10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 UNGP13051 313 aaPredicted RBP10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 NPR3P17342 541 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 BRD2P25440 801 aaKnown RBP10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 PLA2G4AP47712 749 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 GSCP56915 257 aaPredicted RBP10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 RPL10AP62906 217 aaKnown RBP10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 PLD1Q13393 1074 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 GPM6BQ13491 265 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 PTPN14Q15678 1187 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 SLC39A12Q504Y0 691 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 MDH1BQ5I0G3 518 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 PPP1R26Q5T8A7 1209 aaPredicted RBP10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 PRPF38BQ5VTL8 546 aaKnown RBP10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 CHRDL2Q6WN34 429 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 ZNF662Q6ZS27 426 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 PHF13Q86YI8 300 aaPredicted RBP10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 FUKQ8N0W3 1084 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 TMEM130Q8N3G9 435 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 MRPL43Q8N983 215 aaKnown RBP10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 OR10T2Q8NGX3 314 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 SLC2A14Q8TDB8 520 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 HDAC7Q8WUI4 952 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 ELMO3Q96BJ8 720 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 PCED1BQ96HM7 432 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 CDCA3Q99618 268 aaPredicted RBP10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 CHP1Q99653 195 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 TCF25Q9BQ70 676 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 C17orf80Q9BSJ5 609 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 MED10Q9BTT4 135 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 TRIM62Q9BVG3 475 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 VN1R3Q9BXE9 311 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 ISCUQ9H1K1 167 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 DPEP3Q9H4B8 488 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 CSNK1G1Q9HCP0 422 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 CRTAC1Q9NQ79 661 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 SEPT11Q9NVA2 429 aaKnown RBP10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 LMCD1Q9NZU5 365 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 GTF3C4Q9UKN8 822 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 YBX2Q9Y2T7 364 aaKnown RBP10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 CDY1Q9Y6F8 540 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 PTPRDP23468 1912 aa10.95□□□□□ -0.66
CLPTM1-207ENST00000587537 MYH10P35580 1976 aa10.94□□□□□ -0.66
CLPTM1-207ENST00000587537 A0A087X0T9 212 aa10.94□□□□□ -0.66
CLPTM1-207ENST00000587537 MYBPHLA2RUH7 354 aa10.94□□□□□ -0.66
CLPTM1-207ENST00000587537 ANKRD62A6NC57 917 aa10.94□□□□□ -0.66
CLPTM1-207ENST00000587537 SOWAHDA6NJG2 315 aa10.94□□□□□ -0.66
CLPTM1-207ENST00000587537 GRXCR1A8MXD5 290 aa10.94□□□□□ -0.66
CLPTM1-207ENST00000587537 DDX3XO00571 662 aaKnown RBP eCLIP10.94□□□□□ -0.66
CLPTM1-207ENST00000587537 FSCN2O14926 492 aa10.94□□□□□ -0.66
CLPTM1-207ENST00000587537 MICAL2O94851 1124 aa10.94□□□□□ -0.66
CLPTM1-207ENST00000587537 ABLIM3O94929 683 aa10.94□□□□□ -0.66
CLPTM1-207ENST00000587537 FBXO21O94952 628 aa10.94□□□□□ -0.66
CLPTM1-207ENST00000587537 CXCL14O95715 111 aa10.94□□□□□ -0.66
CLPTM1-207ENST00000587537 FAM228BP0C875 321 aa10.94□□□□□ -0.66
CLPTM1-207ENST00000587537 ATF2P15336 505 aa10.94□□□□□ -0.66
CLPTM1-207ENST00000587537 CHRNB2P17787 502 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms