RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 CCDC40Q4G0X9 1142 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 HSP90AA4PQ58FG1 418 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 STXBP5Q5T5C0 1151 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 HEATR6Q6AI08 1181 aaKnown RBP8.42□□□□□ -1.06
VMP1-204ENST00000587259 ARMCX5Q6P1M9 558 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 Q6ZS52 159 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 EPM2AIP1Q7L775 607 aaPredicted RBP8.42□□□□□ -1.06
VMP1-204ENST00000587259 TAS1R3Q7RTX0 852 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 FMNL3Q8IVF7 1028 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 ZC3H3Q8IXZ2 948 aaKnown RBP8.42□□□□□ -1.06
VMP1-204ENST00000587259 MYCT1Q8N699 235 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 ZNF507Q8TCN5 953 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 TMEM174Q8WUU8 243 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 SCFD1Q8WVM8 642 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 FAM3CQ92520 227 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 ELSPBP1Q96BH3 223 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 ZBTB45Q96K62 511 aaPredicted RBP8.42□□□□□ -1.06
VMP1-204ENST00000587259 PRIMPOLQ96LW4 560 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 ASB16Q96NS5 453 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 ERGIC2Q96RQ1 377 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 BAG1Q99933 345 aaPredicted RBP8.42□□□□□ -1.06
VMP1-204ENST00000587259 ADPGKQ9BRR6 497 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 MKNK1Q9BUB5 465 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 RUSC1Q9BVN2 902 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 OSBPL6Q9BZF3 934 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 EDEM3Q9BZQ6 932 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 NUCKS1Q9H1E3 243 aaKnown RBP8.42□□□□□ -1.06
VMP1-204ENST00000587259 CDT1Q9H211 546 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 VPS16Q9H269 839 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 ST6GALNAC4Q9H4F1 302 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 LMAN1LQ9HAT1 526 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 INTS13Q9NVM9 706 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 POLR3BQ9NW08 1133 aaPredicted RBP8.42□□□□□ -1.06
VMP1-204ENST00000587259 ZNHIT6Q9NWK9 470 aaKnown RBP8.42□□□□□ -1.06
VMP1-204ENST00000587259 TAB2Q9NYJ8 693 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 FBXL5Q9UKA1 691 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 EXOC7Q9UPT5 735 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 DAAM1Q9Y4D1 1078 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 TIMM13Q9Y5L4 95 aaPredicted RBP8.42□□□□□ -1.06
VMP1-204ENST00000587259 INSL5Q9Y5Q6 135 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 PIAS3Q9Y6X2 628 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 PHLPP2Q6ZVD8 1323 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 TICRRQ7Z2Z1 1910 aa8.42□□□□□ -1.06
VMP1-204ENST00000587259 COL4A2P08572 1712 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 ZMYM2Q9UBW7 1377 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 A0A1W2PQJ5 194 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 ARHGEF37A1IGU5 675 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 SLC38A8A6NNN8 435 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 CCDC169A6NNP5 214 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 TMEM189-UBE2V1I3L0A0 370 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 TBC1D4O60343 1298 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 SOAT2O75908 522 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 ABLIM3O94929 683 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 VNN2O95498 520 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 EPB41P11171 864 aaKnown RBP8.41□□□□□ -1.06
VMP1-204ENST00000587259 TRIM21P19474 475 aaKnown RBP8.41□□□□□ -1.06
VMP1-204ENST00000587259 ELF1P32519 619 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 NAMPTP43490 491 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 RPS9P46781 194 aaKnown RBP8.41□□□□□ -1.06
VMP1-204ENST00000587259 SMTNP53814 917 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 TERF1P54274 439 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 PMS1P54277 932 aaKnown RBP8.41□□□□□ -1.06
VMP1-204ENST00000587259 LRMPQ12912 555 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 DMP1Q13316 513 aaPredicted RBP8.41□□□□□ -1.06
VMP1-204ENST00000587259 ZNF568Q3ZCX4 644 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 CTXN3Q4LDR2 81 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 VWA3BQ502W6 1294 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 PPM1JQ5JR12 505 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 TXNDC11Q6PKC3 985 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 RNF19BQ6ZMZ0 732 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 ANKS3Q6ZW76 656 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 IRF2BP1Q8IU81 584 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 CREBRFQ8IUR6 639 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 TXLNBQ8N3L3 684 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 ZNF461Q8TAF7 563 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 ZFYVE19Q96K21 471 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 ZNF830Q96NB3 372 aaPredicted RBP8.41□□□□□ -1.06
VMP1-204ENST00000587259 PGLYRP2Q96PD5 576 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 TRMT61BQ9BVS5 477 aaKnown RBP8.41□□□□□ -1.06
VMP1-204ENST00000587259 TARS2Q9BW92 718 aaKnown RBP8.41□□□□□ -1.06
VMP1-204ENST00000587259 C2orf40Q9H1Z8 148 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 CHRDQ9H2X0 955 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 CRISPLD1Q9H336 500 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 KCTD10Q9H3F6 313 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 ZFP14Q9HCL3 533 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 ZNF334Q9HCZ1 680 aaPredicted RBP8.41□□□□□ -1.06
VMP1-204ENST00000587259 GDE1Q9NZC3 331 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 TUBGCP4Q9UGJ1 667 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 BACE2Q9Y5Z0 518 aa8.41□□□□□ -1.06
VMP1-204ENST00000587259 SDK1Q7Z5N4 2213 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 SFI1A8K8P3 1242 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 HEPACAM2A8MVW5 462 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 HIP1RO75146 1068 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 IPO7O95373 1038 aaKnown RBP8.4□□□□□ -1.06
VMP1-204ENST00000587259 POU2F2P09086 479 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 CHRNB1P11230 501 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 PLS3P13797 630 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 ATF2P15336 505 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 FECHP22830 423 aa8.4□□□□□ -1.06
VMP1-204ENST00000587259 NR2F2P24468 414 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms