RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 SCINQ9Y6U3 715 aa21.64■■□□□ 1.05
ATG4D-204ENST00000586417 COL4A6Q14031 1691 aa21.63■■□□□ 1.05
ATG4D-204ENST00000586417 B4GALT3O60512 393 aa21.63■■□□□ 1.05
ATG4D-204ENST00000586417 AMHP03971 560 aa21.63■■□□□ 1.05
ATG4D-204ENST00000586417 TAF6P49848 677 aa21.63■■□□□ 1.05
ATG4D-204ENST00000586417 PEX5P50542 639 aa21.63■■□□□ 1.05
ATG4D-204ENST00000586417 PTPN20Q4JDL3 420 aa21.63■■□□□ 1.05
ATG4D-204ENST00000586417 SGO2Q562F6 1265 aa21.63■■□□□ 1.05
ATG4D-204ENST00000586417 NOMO2Q5JPE7 1267 aa21.63■■□□□ 1.05
ATG4D-204ENST00000586417 PSRC1Q6PGN9 363 aaPredicted RBP21.63■■□□□ 1.05
ATG4D-204ENST00000586417 KBTBD7Q8WVZ9 684 aa21.63■■□□□ 1.05
ATG4D-204ENST00000586417 HEXIM2Q96MH2 286 aaKnown RBP21.63■■□□□ 1.05
ATG4D-204ENST00000586417 MRPL47Q9HD33 250 aaKnown RBP21.63■■□□□ 1.05
ATG4D-204ENST00000586417 HCSTQ9UBK5 93 aa21.63■■□□□ 1.05
ATG4D-204ENST00000586417 TMEM59LQ9UK28 342 aa21.63■■□□□ 1.05
ATG4D-204ENST00000586417 EFCAB14O75071 495 aa21.62■■□□□ 1.05
ATG4D-204ENST00000586417 IGFBP6P24592 240 aaPredicted RBP21.62■■□□□ 1.05
ATG4D-204ENST00000586417 CTNNA2P26232 953 aa21.62■■□□□ 1.05
ATG4D-204ENST00000586417 CTNNA1P35221 906 aaKnown RBP21.62■■□□□ 1.05
ATG4D-204ENST00000586417 RNASE9P60153 205 aaKnown RBP21.62■■□□□ 1.05
ATG4D-204ENST00000586417 ERICH1Q86X53 443 aa21.62■■□□□ 1.05
ATG4D-204ENST00000586417 ZNF280BQ86YH2 543 aa21.62■■□□□ 1.05
ATG4D-204ENST00000586417 PARVAQ9NVD7 372 aa21.62■■□□□ 1.05
ATG4D-204ENST00000586417 RAB21Q9UL25 225 aa21.62■■□□□ 1.05
ATG4D-204ENST00000586417 TTC7AQ9ULT0 858 aaPredicted RBP21.62■■□□□ 1.05
ATG4D-204ENST00000586417 DGKIO75912 1065 aa21.61■■□□□ 1.05
ATG4D-204ENST00000586417 DDHD2O94830 711 aa21.61■■□□□ 1.05
ATG4D-204ENST00000586417 GJB6O95452 261 aa21.61■■□□□ 1.05
ATG4D-204ENST00000586417 SV2CQ496J9 727 aa21.61■■□□□ 1.05
ATG4D-204ENST00000586417 LCLAT1Q6UWP7 414 aa21.61■■□□□ 1.05
ATG4D-204ENST00000586417 UNC93AQ86WB7 457 aa21.61■■□□□ 1.05
ATG4D-204ENST00000586417 PDCL2Q8N4E4 241 aa21.61■■□□□ 1.05
ATG4D-204ENST00000586417 PAAF1Q9BRP4 392 aa21.61■■□□□ 1.05
ATG4D-204ENST00000586417 SLC38A7Q9NVC3 462 aa21.61■■□□□ 1.05
ATG4D-204ENST00000586417 TBC1D13Q9NVG8 400 aa21.61■■□□□ 1.05
ATG4D-204ENST00000586417 RNF216Q9NWF9 866 aaPredicted RBP21.61■■□□□ 1.05
ATG4D-204ENST00000586417 PGRMC1O00264 195 aaKnown RBP21.61■■□□□ 1.05
ATG4D-204ENST00000586417 SPOPO43791 374 aa21.61■■□□□ 1.05
ATG4D-204ENST00000586417 PROSCO94903 275 aa21.61■■□□□ 1.05
ATG4D-204ENST00000586417 GPD2P43304 727 aa21.61■■□□□ 1.05
ATG4D-204ENST00000586417 LILRA4P59901 499 aa21.61■■□□□ 1.05
ATG4D-204ENST00000586417 PAN2Q504Q3 1202 aaKnown RBP21.61■■□□□ 1.05
ATG4D-204ENST00000586417 PPP1R15BQ5SWA1 713 aa21.61■■□□□ 1.05
ATG4D-204ENST00000586417 C9orf50Q5SZB4 431 aa21.61■■□□□ 1.05
ATG4D-204ENST00000586417 ABI1Q8IZP0 508 aa21.61■■□□□ 1.05
ATG4D-204ENST00000586417 UBL4BQ8N7F7 174 aa21.61■■□□□ 1.05
ATG4D-204ENST00000586417 C12orf29Q8N999 325 aa21.61■■□□□ 1.05
ATG4D-204ENST00000586417 HERVK_113Q902F9 699 aa21.61■■□□□ 1.05
ATG4D-204ENST00000586417 TJP2Q9UDY2 1190 aa21.61■■□□□ 1.05
ATG4D-204ENST00000586417 L1RE1Q9UN81 338 aa21.61■■□□□ 1.05
ATG4D-204ENST00000586417 PCDHA3Q9Y5H8 950 aa21.61■■□□□ 1.05
ATG4D-204ENST00000586417 PDE4DIPQ5VU43 2346 aa21.61■■□□□ 1.05
ATG4D-204ENST00000586417 LAMA3Q16787 3333 aa21.6■■□□□ 1.05
ATG4D-204ENST00000586417 TBKBP1A7MCY6 615 aa21.6■■□□□ 1.05
ATG4D-204ENST00000586417 M0QYV0 167 aa21.6■■□□□ 1.05
ATG4D-204ENST00000586417 MYO1FO00160 1098 aa21.6■■□□□ 1.05
ATG4D-204ENST00000586417 CAPN15O75808 1086 aa21.6■■□□□ 1.05
ATG4D-204ENST00000586417 CLCN6P51797 869 aa21.6■■□□□ 1.05
ATG4D-204ENST00000586417 GRIK3Q13003 919 aa21.6■■□□□ 1.05
ATG4D-204ENST00000586417 ACOT1Q86TX2 421 aa21.6■■□□□ 1.05
ATG4D-204ENST00000586417 FEZF2Q8TBJ5 459 aa21.6■■□□□ 1.05
ATG4D-204ENST00000586417 CPXM1Q96SM3 734 aa21.6■■□□□ 1.05
ATG4D-204ENST00000586417 TSPAN16Q9UKR8 245 aa21.6■■□□□ 1.05
ATG4D-204ENST00000586417 CCDC66A2RUB6 948 aa21.59■■□□□ 1.05
ATG4D-204ENST00000586417 TMEM191CA6NGB0 347 aa21.59■■□□□ 1.05
ATG4D-204ENST00000586417 CASTOR2A6NHX0 329 aa21.59■■□□□ 1.05
ATG4D-204ENST00000586417 SLC1A1P43005 524 aa21.59■■□□□ 1.05
ATG4D-204ENST00000586417 GSCP56915 257 aaPredicted RBP21.59■■□□□ 1.05
ATG4D-204ENST00000586417 RPL7AP62424 266 aaKnown RBP21.59■■□□□ 1.05
ATG4D-204ENST00000586417 STILQ15468 1287 aa21.59■■□□□ 1.05
ATG4D-204ENST00000586417 CYP4A22Q5TCH4 519 aa21.59■■□□□ 1.05
ATG4D-204ENST00000586417 DNAJC24Q6P3W2 148 aa21.59■■□□□ 1.05
ATG4D-204ENST00000586417 C3orf20Q8ND61 904 aa21.59■■□□□ 1.05
ATG4D-204ENST00000586417 URGCPQ8TCY9 931 aa21.59■■□□□ 1.05
ATG4D-204ENST00000586417 RNPC3Q96LT9 517 aaKnown RBP21.59■■□□□ 1.05
ATG4D-204ENST00000586417 DNAJB4Q9UDY4 337 aa21.59■■□□□ 1.05
ATG4D-204ENST00000586417 STRIP2Q9ULQ0 834 aa21.59■■□□□ 1.05
ATG4D-204ENST00000586417 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.59■■□□□ 1.05
ATG4D-204ENST00000586417 TARSL2A2RTX5 802 aaKnown RBP21.59■■□□□ 1.05
ATG4D-204ENST00000586417 H0YGN5 161 aa21.59■■□□□ 1.05
ATG4D-204ENST00000586417 HOXA2O43364 376 aa21.59■■□□□ 1.05
ATG4D-204ENST00000586417 HCRTO43612 131 aa21.59■■□□□ 1.05
ATG4D-204ENST00000586417 CLCNKBP51801 687 aa21.59■■□□□ 1.05
ATG4D-204ENST00000586417 RNASELQ05823 741 aaKnown RBP21.59■■□□□ 1.05
ATG4D-204ENST00000586417 PDCLQ13371 301 aa21.59■■□□□ 1.05
ATG4D-204ENST00000586417 ZNF211Q13398 564 aaPredicted RBP21.59■■□□□ 1.05
ATG4D-204ENST00000586417 OR6B3Q8NGW1 331 aa21.59■■□□□ 1.05
ATG4D-204ENST00000586417 ZNF689Q96CS4 500 aaPredicted RBP21.59■■□□□ 1.05
ATG4D-204ENST00000586417 LRRC1Q9BTT6 524 aa21.59■■□□□ 1.05
ATG4D-204ENST00000586417 DPEP3Q9H4B8 488 aa21.59■■□□□ 1.05
ATG4D-204ENST00000586417 RC3H2Q9HBD1 1191 aaKnown RBP21.59■■□□□ 1.05
ATG4D-204ENST00000586417 VSNL1P62760 191 aa21.58■■□□□ 1.04
ATG4D-204ENST00000586417 DSC1Q08554 894 aa21.58■■□□□ 1.04
ATG4D-204ENST00000586417 ZNF252P-AS1Q0IIN9 211 aa21.58■■□□□ 1.04
ATG4D-204ENST00000586417 PKDCCQ504Y2 493 aa21.58■■□□□ 1.04
ATG4D-204ENST00000586417 PPP1R26Q5T8A7 1209 aaPredicted RBP21.58■■□□□ 1.04
ATG4D-204ENST00000586417 WDR93Q6P2C0 686 aa21.58■■□□□ 1.04
ATG4D-204ENST00000586417 DPH6Q7L8W6 267 aa21.58■■□□□ 1.04
ATG4D-204ENST00000586417 TOP6BLQ8N6T0 577 aa21.58■■□□□ 1.04
ATG4D-204ENST00000586417 APPL2Q8NEU8 664 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms