RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 ITGB3P05106 788 aa15.55■□□□□ 0.08
SDF2-202ENST00000585428 GARTP22102 1010 aa15.55■□□□□ 0.08
SDF2-202ENST00000585428 POLR2BP30876 1174 aaKnown RBP15.55■□□□□ 0.08
SDF2-202ENST00000585428 CCDC6Q16204 474 aa15.55■□□□□ 0.08
SDF2-202ENST00000585428 CFAP221Q4G0U5 840 aa15.55■□□□□ 0.08
SDF2-202ENST00000585428 INTS6LQ5JSJ4 861 aaKnown RBP15.55■□□□□ 0.08
SDF2-202ENST00000585428 NAIF1Q69YI7 327 aaPredicted RBP15.55■□□□□ 0.08
SDF2-202ENST00000585428 FAM171BQ6P995 826 aa15.55■□□□□ 0.08
SDF2-202ENST00000585428 LIMS2Q7Z4I7 341 aa15.55■□□□□ 0.08
SDF2-202ENST00000585428 BRSK2Q8IWQ3 736 aa15.55■□□□□ 0.08
SDF2-202ENST00000585428 SPATA18Q8TC71 538 aa15.55■□□□□ 0.08
SDF2-202ENST00000585428 OSCP1Q8WVF1 389 aa15.55■□□□□ 0.08
SDF2-202ENST00000585428 ACCSQ96QU6 501 aa15.55■□□□□ 0.08
SDF2-202ENST00000585428 UXTQ9UBK9 157 aaPredicted RBP15.55■□□□□ 0.08
SDF2-202ENST00000585428 EBF1Q9UH73 591 aa15.55■□□□□ 0.08
SDF2-202ENST00000585428 EXOC7Q9UPT5 735 aa15.55■□□□□ 0.08
SDF2-202ENST00000585428 PCDHGA5Q9Y5G8 931 aa15.55■□□□□ 0.08
SDF2-202ENST00000585428 SRPRBQ9Y5M8 271 aaKnown RBP15.55■□□□□ 0.08
SDF2-202ENST00000585428 SCN1AP35498 2009 aa15.55■□□□□ 0.08
SDF2-202ENST00000585428 KMT2BQ9UMN6 2715 aaPredicted RBP15.54■□□□□ 0.08
SDF2-202ENST00000585428 GAP43P17677 238 aa15.54■□□□□ 0.08
SDF2-202ENST00000585428 ACAT1P24752 427 aaKnown RBP15.54■□□□□ 0.08
SDF2-202ENST00000585428 LHX1P48742 406 aa15.54■□□□□ 0.08
SDF2-202ENST00000585428 CASP5P51878 434 aa15.54■□□□□ 0.08
SDF2-202ENST00000585428 RBP5P82980 135 aa15.54■□□□□ 0.08
SDF2-202ENST00000585428 FAM160A1Q05DH4 1040 aa15.54■□□□□ 0.08
SDF2-202ENST00000585428 ZNF77Q15935 545 aa15.54■□□□□ 0.08
SDF2-202ENST00000585428 SOWAHAQ2M3V2 549 aa15.54■□□□□ 0.08
SDF2-202ENST00000585428 PLK5Q496M5 336 aa15.54■□□□□ 0.08
SDF2-202ENST00000585428 AASDHQ4L235 1098 aaPredicted RBP15.54■□□□□ 0.08
SDF2-202ENST00000585428 N4BP2L1Q5TBK1 243 aaPredicted RBP15.54■□□□□ 0.08
SDF2-202ENST00000585428 IL31Q6EBC2 164 aa15.54■□□□□ 0.08
SDF2-202ENST00000585428 SV2BQ7L1I2 683 aa15.54■□□□□ 0.08
SDF2-202ENST00000585428 SYT13Q7L8C5 426 aa15.54■□□□□ 0.08
SDF2-202ENST00000585428 SAAL1Q96ER3 474 aa15.54■□□□□ 0.08
SDF2-202ENST00000585428 DUSP15Q9H1R2 295 aaPredicted RBP15.54■□□□□ 0.08
SDF2-202ENST00000585428 LINC00597Q9H2U6 94 aa15.54■□□□□ 0.08
SDF2-202ENST00000585428 TMEM206Q9H813 350 aa15.54■□□□□ 0.08
SDF2-202ENST00000585428 OLFML3Q9NRN5 406 aa15.54■□□□□ 0.08
SDF2-202ENST00000585428 DUS2Q9NX74 493 aaKnown RBP15.54■□□□□ 0.08
SDF2-202ENST00000585428 TBC1D7Q9P0N9 293 aa15.54■□□□□ 0.08
SDF2-202ENST00000585428 GCNT4Q9P109 453 aa15.54■□□□□ 0.08
SDF2-202ENST00000585428 CCDC39Q9UFE4 941 aa15.54■□□□□ 0.08
SDF2-202ENST00000585428 SIX4Q9UIU6 781 aa15.54■□□□□ 0.08
SDF2-202ENST00000585428 FBXO2Q9UK22 296 aaPredicted RBP15.54■□□□□ 0.08
SDF2-202ENST00000585428 ITGA11Q9UKX5 1188 aa15.54■□□□□ 0.08
SDF2-202ENST00000585428 PCDHB13Q9Y5F0 798 aa15.54■□□□□ 0.08
SDF2-202ENST00000585428 NUP210Q8TEM1 1887 aaPredicted RBP15.53■□□□□ 0.08
SDF2-202ENST00000585428 USP17L7P0C7H9 530 aa15.53■□□□□ 0.08
SDF2-202ENST00000585428 CCDC192P0DO97 292 aa15.53■□□□□ 0.08
SDF2-202ENST00000585428 TCF3P15923 654 aa15.53■□□□□ 0.08
SDF2-202ENST00000585428 MYL7Q01449 175 aa15.53■□□□□ 0.08
SDF2-202ENST00000585428 MTF1Q14872 753 aa15.53■□□□□ 0.08
SDF2-202ENST00000585428 EML3Q32P44 896 aa15.53■□□□□ 0.08
SDF2-202ENST00000585428 STPG1Q5TH74 334 aa15.53■□□□□ 0.08
SDF2-202ENST00000585428 RRAGBQ5VZM2 374 aa15.53■□□□□ 0.08
SDF2-202ENST00000585428 DPH6Q7L8W6 267 aa15.53■□□□□ 0.08
SDF2-202ENST00000585428 OSTM1Q86WC4 334 aa15.53■□□□□ 0.08
SDF2-202ENST00000585428 TOP6BLQ8N6T0 577 aa15.53■□□□□ 0.08
SDF2-202ENST00000585428 C12orf50Q8NA57 414 aaPredicted RBP15.53■□□□□ 0.08
SDF2-202ENST00000585428 EXOC4Q96A65 974 aa15.53■□□□□ 0.08
SDF2-202ENST00000585428 FUBP3Q96I24 572 aaKnown RBP eCLIP15.53■□□□□ 0.08
SDF2-202ENST00000585428 LSM14BQ9BX40 385 aaKnown RBP15.53■□□□□ 0.08
SDF2-202ENST00000585428 PDE11AQ9HCR9 933 aa15.53■□□□□ 0.08
SDF2-202ENST00000585428 RBAKQ9NYW8 714 aaPredicted RBP15.53■□□□□ 0.08
SDF2-202ENST00000585428 SNX9Q9Y5X1 595 aa15.53■□□□□ 0.08
SDF2-202ENST00000585428 LAMA1P25391 3075 aa15.52■□□□□ 0.08
SDF2-202ENST00000585428 FRMD3A2A2Y4 597 aa15.52■□□□□ 0.08
SDF2-202ENST00000585428 HCRTO43612 131 aa15.52■□□□□ 0.08
SDF2-202ENST00000585428 ATP2C2O75185 946 aa15.52■□□□□ 0.08
SDF2-202ENST00000585428 GCNT3O95395 438 aa15.52■□□□□ 0.08
SDF2-202ENST00000585428 LMO2P25791 158 aa15.52■□□□□ 0.08
SDF2-202ENST00000585428 PMLP29590 882 aa15.52■□□□□ 0.08
SDF2-202ENST00000585428 MAGEA11P43364 429 aa15.52■□□□□ 0.08
SDF2-202ENST00000585428 ZXDBP98169 803 aa15.52■□□□□ 0.08
SDF2-202ENST00000585428 ST3GAL2Q16842 350 aa15.52■□□□□ 0.08
SDF2-202ENST00000585428 CCDC142Q17RM4 750 aa15.52■□□□□ 0.08
SDF2-202ENST00000585428 CPA6Q8N4T0 437 aa15.52■□□□□ 0.08
SDF2-202ENST00000585428 ARL14EPQ8N8R7 260 aaPredicted RBP15.52■□□□□ 0.08
SDF2-202ENST00000585428 RPLP0P6Q8NHW5 317 aa15.52■□□□□ 0.08
SDF2-202ENST00000585428 CD101Q93033 1021 aa15.52■□□□□ 0.08
SDF2-202ENST00000585428 ATP2A3Q93084 1043 aa15.52■□□□□ 0.08
SDF2-202ENST00000585428 FAM84AQ96KN4 292 aa15.52■□□□□ 0.08
SDF2-202ENST00000585428 CLIC6Q96NY7 704 aa15.52■□□□□ 0.08
SDF2-202ENST00000585428 CBWD1Q9BRT8 395 aa15.52■□□□□ 0.08
SDF2-202ENST00000585428 FGFBP2Q9BYJ0 223 aa15.52■□□□□ 0.08
SDF2-202ENST00000585428 VPS45Q9NRW7 570 aa15.52■□□□□ 0.08
SDF2-202ENST00000585428 SPTBN2O15020 2390 aa15.51■□□□□ 0.07
SDF2-202ENST00000585428 TRAV19A0A0A6YYK7 116 aa15.51■□□□□ 0.07
SDF2-202ENST00000585428 GOLGA8IPA6NC78 632 aa15.51■□□□□ 0.07
SDF2-202ENST00000585428 C2orf78A6NCI8 922 aa15.51■□□□□ 0.07
SDF2-202ENST00000585428 GOLGA8JA6NMD2 632 aa15.51■□□□□ 0.07
SDF2-202ENST00000585428 HDCP19113 662 aa15.51■□□□□ 0.07
SDF2-202ENST00000585428 PCSK1P29120 753 aa15.51■□□□□ 0.07
SDF2-202ENST00000585428 MPLP40238 635 aa15.51■□□□□ 0.07
SDF2-202ENST00000585428 SHC2P98077 582 aa15.51■□□□□ 0.07
SDF2-202ENST00000585428 DMC1Q14565 340 aa15.51■□□□□ 0.07
SDF2-202ENST00000585428 SPATA2LQ8IUW3 424 aaPredicted RBP15.51■□□□□ 0.07
SDF2-202ENST00000585428 FSIP1Q8NA03 581 aa15.51■□□□□ 0.07
SDF2-202ENST00000585428 SH3RF2Q8TEC5 729 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms