RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 CDH5P33151 784 aaPredicted RBP13.7□□□□□ -0.22
TRIM47-202ENST00000585333 CA8P35219 290 aa13.7□□□□□ -0.22
TRIM47-202ENST00000585333 EIF4A3P38919 411 aaKnown RBP13.7□□□□□ -0.22
TRIM47-202ENST00000585333 CYP27A1Q02318 531 aa13.7□□□□□ -0.22
TRIM47-202ENST00000585333 RAB33AQ14088 237 aa13.7□□□□□ -0.22
TRIM47-202ENST00000585333 PTPN14Q15678 1187 aa13.7□□□□□ -0.22
TRIM47-202ENST00000585333 SCARA3Q6AZY7 606 aa13.7□□□□□ -0.22
TRIM47-202ENST00000585333 FAM109BQ6ICB4 259 aaPredicted RBP13.7□□□□□ -0.22
TRIM47-202ENST00000585333 TMEM130Q8N3G9 435 aa13.7□□□□□ -0.22
TRIM47-202ENST00000585333 ZNF461Q8TAF7 563 aa13.7□□□□□ -0.22
TRIM47-202ENST00000585333 SPPL3Q8TCT6 385 aa13.7□□□□□ -0.22
TRIM47-202ENST00000585333 MICAL1Q8TDZ2 1067 aa13.7□□□□□ -0.22
TRIM47-202ENST00000585333 ELMO3Q96BJ8 720 aa13.7□□□□□ -0.22
TRIM47-202ENST00000585333 TWNKQ96RR1 684 aa13.7□□□□□ -0.22
TRIM47-202ENST00000585333 EIF3CQ99613 913 aaKnown RBP13.7□□□□□ -0.22
TRIM47-202ENST00000585333 CDCA3Q99618 268 aaPredicted RBP13.7□□□□□ -0.22
TRIM47-202ENST00000585333 TRIM62Q9BVG3 475 aa13.7□□□□□ -0.22
TRIM47-202ENST00000585333 DMAP1Q9NPF5 467 aaPredicted RBP13.7□□□□□ -0.22
TRIM47-202ENST00000585333 HMGXB4Q9UGU5 601 aa13.7□□□□□ -0.22
TRIM47-202ENST00000585333 LCMT1Q9UIC8 334 aa13.7□□□□□ -0.22
TRIM47-202ENST00000585333 TSPAN16Q9UKR8 245 aa13.7□□□□□ -0.22
TRIM47-202ENST00000585333 INTUQ9ULD6 942 aa13.7□□□□□ -0.22
TRIM47-202ENST00000585333 YBX2Q9Y2T7 364 aaKnown RBP13.7□□□□□ -0.22
TRIM47-202ENST00000585333 CDY1Q9Y6F8 540 aa13.7□□□□□ -0.22
TRIM47-202ENST00000585333 EPN1Q9Y6I3 576 aaPredicted RBP13.7□□□□□ -0.22
TRIM47-202ENST00000585333 NLRC5Q86WI3 1866 aa13.7□□□□□ -0.22
TRIM47-202ENST00000585333 KIAA1671Q9BY89 1806 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 GOLGA6L9A6NEM1 432 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 XPO1O14980 1071 aaKnown RBP13.69□□□□□ -0.22
TRIM47-202ENST00000585333 ZSCAN12O43309 604 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 RTN2O75298 545 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 NDUFA10O95299 355 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 CALB1P05937 261 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 CCDC175P0C221 793 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 PNMA6AP0CW24 399 aaPredicted RBP13.69□□□□□ -0.22
TRIM47-202ENST00000585333 SRGAP2BP0DMP2 458 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 NPR3P17342 541 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 DESP17661 470 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 ACAT1P24752 427 aaKnown RBP13.69□□□□□ -0.22
TRIM47-202ENST00000585333 PSMC1P62191 440 aaKnown RBP13.69□□□□□ -0.22
TRIM47-202ENST00000585333 GOLGA7BQ2TAP0 167 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 SLC39A12Q504Y0 691 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 HABP4Q5JVS0 413 aaKnown RBP13.69□□□□□ -0.22
TRIM47-202ENST00000585333 PPP1R26Q5T8A7 1209 aaPredicted RBP13.69□□□□□ -0.22
TRIM47-202ENST00000585333 LIN9Q5TKA1 542 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 ALKBH5Q6P6C2 394 aaKnown RBP13.69□□□□□ -0.22
TRIM47-202ENST00000585333 CCDC149Q6ZUS6 474 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 ZNF571Q7Z3V5 609 aaPredicted RBP13.69□□□□□ -0.22
TRIM47-202ENST00000585333 FAM35AQ86V20 835 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 ZDHHC17Q8IUH5 632 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 GLYCTKQ8IVS8 523 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 MRPL43Q8N983 215 aaKnown RBP13.69□□□□□ -0.22
TRIM47-202ENST00000585333 OR10T2Q8NGX3 314 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 SLC2A14Q8TDB8 520 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 HDAC7Q8WUI4 952 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 DDX1Q92499 740 aaKnown RBP13.69□□□□□ -0.22
TRIM47-202ENST00000585333 MYLPFQ96A32 169 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 PCED1BQ96HM7 432 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 HSFY1Q96LI6 401 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 RTP3Q9BQQ7 232 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 DUSP16Q9BY84 665 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 TSGA10Q9BZW7 698 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 DPEP3Q9H4B8 488 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 SYNCQ9H7C4 482 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 CRTAC1Q9NQ79 661 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 FAM49BQ9NUQ9 324 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 LMCD1Q9NZU5 365 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 WDR35Q9P2L0 1181 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 ADAMTS1Q9UHI8 967 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 GTF3C4Q9UKN8 822 aa13.69□□□□□ -0.22
TRIM47-202ENST00000585333 RBAK-RBAKDNI3L0D1 243 aa13.68□□□□□ -0.22
TRIM47-202ENST00000585333 C2CD2LO14523 706 aa13.68□□□□□ -0.22
TRIM47-202ENST00000585333 AP1G2O75843 785 aa13.68□□□□□ -0.22
TRIM47-202ENST00000585333 MICAL2O94851 1124 aa13.68□□□□□ -0.22
TRIM47-202ENST00000585333 LCA5LO95447 670 aa13.68□□□□□ -0.22
TRIM47-202ENST00000585333 CYP1A1P04798 512 aaPredicted RBP13.68□□□□□ -0.22
TRIM47-202ENST00000585333 MMEP08473 750 aa13.68□□□□□ -0.22
TRIM47-202ENST00000585333 MYOGP15173 224 aa13.68□□□□□ -0.22
TRIM47-202ENST00000585333 ATF2P15336 505 aa13.68□□□□□ -0.22
TRIM47-202ENST00000585333 OR1D2P34982 312 aa13.68□□□□□ -0.22
TRIM47-202ENST00000585333 FMO1Q01740 532 aa13.68□□□□□ -0.22
TRIM47-202ENST00000585333 ROR1Q01973 937 aa13.68□□□□□ -0.22
TRIM47-202ENST00000585333 CENPCQ03188 943 aa13.68□□□□□ -0.22
TRIM47-202ENST00000585333 CLEC16AQ2KHT3 1053 aa13.68□□□□□ -0.22
TRIM47-202ENST00000585333 TAF3Q5VWG9 929 aa13.68□□□□□ -0.22
TRIM47-202ENST00000585333 E4F1Q66K89 784 aaPredicted RBP13.68□□□□□ -0.22
TRIM47-202ENST00000585333 PRSS55Q6UWB4 352 aaPredicted RBP13.68□□□□□ -0.22
TRIM47-202ENST00000585333 FUKQ8N0W3 1084 aa13.68□□□□□ -0.22
TRIM47-202ENST00000585333 C12orf29Q8N999 325 aa13.68□□□□□ -0.22
TRIM47-202ENST00000585333 ARNTL2Q8WYA1 636 aa13.68□□□□□ -0.22
TRIM47-202ENST00000585333 CTNNBL1Q8WYA6 563 aaPredicted RBP13.68□□□□□ -0.22
TRIM47-202ENST00000585333 PKMYT1Q99640 499 aa13.68□□□□□ -0.22
TRIM47-202ENST00000585333 SYT11Q9BT88 431 aa13.68□□□□□ -0.22
TRIM47-202ENST00000585333 VN1R3Q9BXE9 311 aa13.68□□□□□ -0.22
TRIM47-202ENST00000585333 ALG13Q9NP73 1137 aaKnown RBP13.68□□□□□ -0.22
TRIM47-202ENST00000585333 KRT82Q9NSB4 513 aa13.68□□□□□ -0.22
TRIM47-202ENST00000585333 TMEM51Q9NW97 253 aa13.68□□□□□ -0.22
TRIM47-202ENST00000585333 COMMD8Q9NX08 183 aa13.68□□□□□ -0.22
TRIM47-202ENST00000585333 NAGPAQ9UK23 515 aa13.68□□□□□ -0.22
TRIM47-202ENST00000585333 MTUS1Q9ULD2 1270 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms