RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 FRMD8P1Q9BZ68 369 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 HAO1Q9UJM8 370 aa14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 STRIP2Q9ULQ0 834 aa14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ZMYND8Q9ULU4 1186 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 TOM1L1O75674 476 aa14.91□□□□□ -0.02
CDK5RAP3-237ENST00000585163 T-ENOLP0DO92 83 aa14.91□□□□□ -0.02
CDK5RAP3-237ENST00000585163 PTPRAP18433 802 aa14.91□□□□□ -0.02
CDK5RAP3-237ENST00000585163 SSTR1P30872 391 aa14.91□□□□□ -0.02
CDK5RAP3-237ENST00000585163 RFC1P35251 1148 aaPredicted RBP14.91□□□□□ -0.02
CDK5RAP3-237ENST00000585163 GDF10P55107 478 aa14.91□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ARL4CP56559 192 aa14.91□□□□□ -0.02
CDK5RAP3-237ENST00000585163 TFDP1Q14186 410 aa14.91□□□□□ -0.02
CDK5RAP3-237ENST00000585163 MSS51Q4VC12 460 aa14.91□□□□□ -0.02
CDK5RAP3-237ENST00000585163 FNBP1LQ5T0N5 605 aa14.91□□□□□ -0.02
CDK5RAP3-237ENST00000585163 NBPF12Q5TAG4 269 aaPredicted RBP14.91□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ANKRD22Q5VYY1 191 aa14.91□□□□□ -0.02
CDK5RAP3-237ENST00000585163 OTOAQ7RTW8 1153 aa14.91□□□□□ -0.02
CDK5RAP3-237ENST00000585163 MAF1Q9H063 256 aa14.91□□□□□ -0.02
CDK5RAP3-237ENST00000585163 DONSONQ9NYP3 566 aa14.91□□□□□ -0.02
CDK5RAP3-237ENST00000585163 AGTPBP1Q9UPW5 1226 aa14.91□□□□□ -0.02
CDK5RAP3-237ENST00000585163 CEP83Q9Y592 693 aa14.91□□□□□ -0.02
CDK5RAP3-237ENST00000585163 LCTP09848 1927 aa14.91□□□□□ -0.02
CDK5RAP3-237ENST00000585163 E7ESA3 106 aa14.91□□□□□ -0.02
CDK5RAP3-237ENST00000585163 MSCO60682 206 aa14.91□□□□□ -0.02
CDK5RAP3-237ENST00000585163 WEE2P0C1S8 567 aa14.91□□□□□ -0.02
CDK5RAP3-237ENST00000585163 PSMA2P25787 234 aa14.91□□□□□ -0.02
CDK5RAP3-237ENST00000585163 PSMC4P43686 418 aa14.91□□□□□ -0.02
CDK5RAP3-237ENST00000585163 TAZQ16635 292 aa14.91□□□□□ -0.02
CDK5RAP3-237ENST00000585163 DUOXA2Q1HG44 320 aa14.91□□□□□ -0.02
CDK5RAP3-237ENST00000585163 BBS12Q6ZW61 710 aa14.91□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ARFGAP1Q8N6T3 406 aa14.91□□□□□ -0.02
CDK5RAP3-237ENST00000585163 TTC13Q8NBP0 860 aa14.91□□□□□ -0.02
CDK5RAP3-237ENST00000585163 SLC7A6OSQ96CW6 309 aaPredicted RBP14.91□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ZNF570Q96NI8 536 aa14.91□□□□□ -0.02
CDK5RAP3-237ENST00000585163 WDR83Q9BRX9 315 aaKnown RBP14.91□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ACSS3Q9H6R3 686 aa14.91□□□□□ -0.02
CDK5RAP3-237ENST00000585163 SIGLEC16A6NMB1 481 aa14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 KIF1CO43896 1103 aaKnown RBP14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 CST8O60676 142 aa14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 LRCH4O75427 683 aa14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 KRT7P08729 469 aa14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 IL1R2P27930 398 aa14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 DYNLT1P63172 113 aa14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 EFTUD2Q15029 972 aaKnown RBP eCLIP14.9□□□□□ -0.027e-16■□□□□ 10
CDK5RAP3-237ENST00000585163 SLC45A4Q5BKX6 768 aa14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 C3orf62Q6ZUJ4 267 aa14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ZBTB33Q86T24 672 aa14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ZNF276Q8N554 614 aa14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 MZB1Q8WU39 189 aa14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 PAFAH2Q99487 392 aa14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 TCHPQ9BT92 498 aa14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 SLC5A4Q9NY91 659 aa14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 C2CD2LO14523 706 aa14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 TRAFD1O14545 582 aaPredicted RBP14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 KRT3P12035 628 aa14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 RPL22P35268 128 aaKnown RBP14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 RASSF2P50749 326 aa14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 EFNA5P52803 228 aa14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 FSTL1Q12841 308 aa14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 SMTNL2Q2TAL5 461 aa14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 KLHL38Q2WGJ6 581 aa14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 PTPN20Q4JDL3 420 aa14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 RHPN2Q8IUC4 686 aa14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ZNF398Q8TD17 642 aa14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 FNIP1Q8TF40 1166 aa14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 PCYT2Q99447 389 aa14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 MRPL4Q9BYD3 311 aaKnown RBP14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 C10orf88Q9H8K7 445 aa14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ZWILCHQ9H900 591 aa14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 BATF3Q9NR55 127 aa14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ZNF112Q9UJU3 913 aa14.9□□□□□ -0.02
CDK5RAP3-237ENST00000585163 TNS1Q9HBL0 1735 aaKnown RBP14.89□□□□□ -0.03
CDK5RAP3-237ENST00000585163 KDELR1P24390 212 aa14.89□□□□□ -0.03
CDK5RAP3-237ENST00000585163 ADRA1DP25100 572 aa14.89□□□□□ -0.03
CDK5RAP3-237ENST00000585163 POLR2BP30876 1174 aaKnown RBP14.89□□□□□ -0.03
CDK5RAP3-237ENST00000585163 ASPAP45381 313 aa14.89□□□□□ -0.03
CDK5RAP3-237ENST00000585163 TRPC3Q13507 836 aa14.89□□□□□ -0.03
CDK5RAP3-237ENST00000585163 NAA25Q14CX7 972 aa14.89□□□□□ -0.03
CDK5RAP3-237ENST00000585163 MAPK6Q16659 721 aa14.89□□□□□ -0.03
CDK5RAP3-237ENST00000585163 KCNT1Q5JUK3 1230 aa14.89□□□□□ -0.03
CDK5RAP3-237ENST00000585163 DCAF15Q66K64 600 aa14.89□□□□□ -0.03
CDK5RAP3-237ENST00000585163 SMYD5Q6GMV2 418 aa14.89□□□□□ -0.03
CDK5RAP3-237ENST00000585163 CATSPERGQ6ZRH7 1159 aa14.89□□□□□ -0.03
CDK5RAP3-237ENST00000585163 THNSL1Q8IYQ7 743 aa14.89□□□□□ -0.03
CDK5RAP3-237ENST00000585163 KIAA0319LQ8IZA0 1049 aa14.89□□□□□ -0.03
CDK5RAP3-237ENST00000585163 DNERQ8NFT8 737 aa14.89□□□□□ -0.03
CDK5RAP3-237ENST00000585163 PRPF31Q8WWY3 499 aaKnown RBP14.89□□□□□ -0.03
CDK5RAP3-237ENST00000585163 TBC1D10AQ9BXI6 508 aa14.89□□□□□ -0.03
CDK5RAP3-237ENST00000585163 LHX5Q9H2C1 402 aa14.89□□□□□ -0.03
CDK5RAP3-237ENST00000585163 PICK1Q9NRD5 415 aa14.89□□□□□ -0.03
CDK5RAP3-237ENST00000585163 NRBP2Q9NSY0 501 aa14.89□□□□□ -0.03
CDK5RAP3-237ENST00000585163 C19orf81C9J6K1 198 aa14.89□□□□□ -0.03
CDK5RAP3-237ENST00000585163 SMAPO00193 183 aa14.89□□□□□ -0.03
CDK5RAP3-237ENST00000585163 OGTO15294 1046 aa14.89□□□□□ -0.03
CDK5RAP3-237ENST00000585163 TM9SF1O15321 606 aa14.89□□□□□ -0.03
CDK5RAP3-237ENST00000585163 MAFO75444 373 aaPredicted RBP14.89□□□□□ -0.03
CDK5RAP3-237ENST00000585163 SURF1Q15526 300 aa14.89□□□□□ -0.03
CDK5RAP3-237ENST00000585163 HADHQ16836 314 aaKnown RBP14.89□□□□□ -0.03
CDK5RAP3-237ENST00000585163 ANKRD20A2Q5SQ80 823 aa14.89□□□□□ -0.03
CDK5RAP3-237ENST00000585163 ANKRD20A1Q5TYW2 823 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms