RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 PARD3BQ8TEW8 1205 aa19.28■□□□□ 0.68
SRSF1-208ENST00000584773 GCNAQ96QF7 691 aa19.28■□□□□ 0.68
SRSF1-208ENST00000584773 TASP1Q9H6P5 420 aa19.28■□□□□ 0.68
SRSF1-208ENST00000584773 NXF1Q9UBU9 619 aaKnown RBP19.28■□□□□ 0.68
SRSF1-208ENST00000584773 CDH9Q9ULB4 789 aa19.28■□□□□ 0.68
SRSF1-208ENST00000584773 NDRG2Q9UN36 371 aaKnown RBP19.28■□□□□ 0.68
SRSF1-208ENST00000584773 ZFHX2Q9C0A1 2572 aaPredicted RBP19.28■□□□□ 0.68
SRSF1-208ENST00000584773 SLC38A8A6NNN8 435 aa19.27■□□□□ 0.68
SRSF1-208ENST00000584773 PHACTR2O75167 634 aa19.27■□□□□ 0.68
SRSF1-208ENST00000584773 RHOBTB3O94955 611 aa19.27■□□□□ 0.68
SRSF1-208ENST00000584773 VNN1O95497 513 aa19.27■□□□□ 0.68
SRSF1-208ENST00000584773 FGF19O95750 216 aa19.27■□□□□ 0.68
SRSF1-208ENST00000584773 MYL1P05976 194 aa19.27■□□□□ 0.68
SRSF1-208ENST00000584773 NBL1P41271 181 aa19.27■□□□□ 0.68
SRSF1-208ENST00000584773 RAP1GAPP47736 663 aa19.27■□□□□ 0.68
SRSF1-208ENST00000584773 BIRC3Q13489 604 aa19.27■□□□□ 0.68
SRSF1-208ENST00000584773 TRPC3Q13507 836 aa19.27■□□□□ 0.68
SRSF1-208ENST00000584773 MDH1BQ5I0G3 518 aa19.27■□□□□ 0.68
SRSF1-208ENST00000584773 CEP135Q66GS9 1140 aa19.27■□□□□ 0.68
SRSF1-208ENST00000584773 TXNDC8Q6A555 127 aa19.27■□□□□ 0.68
SRSF1-208ENST00000584773 SCARA5Q6ZMJ2 495 aa19.27■□□□□ 0.68
SRSF1-208ENST00000584773 SLC9A9Q8IVB4 645 aa19.27■□□□□ 0.68
SRSF1-208ENST00000584773 YAF2Q8IY57 180 aa19.27■□□□□ 0.68
SRSF1-208ENST00000584773 MAB21L3Q8N8X9 362 aa19.27■□□□□ 0.68
SRSF1-208ENST00000584773 IRF7Q92985 503 aa19.27■□□□□ 0.68
SRSF1-208ENST00000584773 SMYD3Q9H7B4 428 aa19.27■□□□□ 0.68
SRSF1-208ENST00000584773 ABCB6Q9NP58 842 aa19.27■□□□□ 0.68
SRSF1-208ENST00000584773 CCL26Q9Y258 94 aa19.27■□□□□ 0.68
SRSF1-208ENST00000584773 PIAS3Q9Y6X2 628 aa19.27■□□□□ 0.68
SRSF1-208ENST00000584773 ANAPC1Q9H1A4 1944 aa19.27■□□□□ 0.67
SRSF1-208ENST00000584773 PDXKO00764 312 aa19.26■□□□□ 0.67
SRSF1-208ENST00000584773 GFRA3O60609 400 aa19.26■□□□□ 0.67
SRSF1-208ENST00000584773 NOL4O94818 638 aa19.26■□□□□ 0.67
SRSF1-208ENST00000584773 CLSTN1O94985 981 aa19.26■□□□□ 0.67
SRSF1-208ENST00000584773 C4BPAP04003 597 aaKnown RBP19.26■□□□□ 0.67
SRSF1-208ENST00000584773 CSH1P0DML2 217 aa19.26■□□□□ 0.67
SRSF1-208ENST00000584773 CSH2P0DML3 217 aa19.26■□□□□ 0.67
SRSF1-208ENST00000584773 BDNFP23560 247 aa19.26■□□□□ 0.67
SRSF1-208ENST00000584773 RPL10AP62906 217 aaKnown RBP19.26■□□□□ 0.67
SRSF1-208ENST00000584773 TNNC1P63316 161 aa19.26■□□□□ 0.67
SRSF1-208ENST00000584773 CYP27A1Q02318 531 aa19.26■□□□□ 0.67
SRSF1-208ENST00000584773 FCHO2Q0JRZ9 810 aa19.26■□□□□ 0.67
SRSF1-208ENST00000584773 FZD5Q13467 585 aa19.26■□□□□ 0.67
SRSF1-208ENST00000584773 CFAP221Q4G0U5 840 aa19.26■□□□□ 0.67
SRSF1-208ENST00000584773 ZNF852Q6ZMS4 543 aa19.26■□□□□ 0.67
SRSF1-208ENST00000584773 C1orf210Q8IVY1 113 aa19.26■□□□□ 0.67
SRSF1-208ENST00000584773 SMYD4Q8IYR2 804 aaPredicted RBP19.26■□□□□ 0.67
SRSF1-208ENST00000584773 MAML2Q8IZL2 1156 aaPredicted RBP19.26■□□□□ 0.67
SRSF1-208ENST00000584773 OR6B3Q8NGW1 331 aa19.26■□□□□ 0.67
SRSF1-208ENST00000584773 RIN3Q8TB24 985 aa19.26■□□□□ 0.67
SRSF1-208ENST00000584773 PCED1BQ96HM7 432 aa19.26■□□□□ 0.67
SRSF1-208ENST00000584773 SNX25Q9H3E2 840 aa19.26■□□□□ 0.67
SRSF1-208ENST00000584773 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.26■□□□□ 0.673e-6■■■□□ 19.1
SRSF1-208ENST00000584773 R4GN57 208 aa19.26■□□□□ 0.67
SRSF1-208ENST00000584773 DPYSL4O14531 572 aa19.25■□□□□ 0.67
SRSF1-208ENST00000584773 GNL1P36915 607 aaPredicted RBP19.25■□□□□ 0.67
SRSF1-208ENST00000584773 CDH8P55286 799 aa19.25■□□□□ 0.67
SRSF1-208ENST00000584773 TNK2Q07912 1038 aa19.25■□□□□ 0.67
SRSF1-208ENST00000584773 PNOCQ13519 176 aa19.25■□□□□ 0.67
SRSF1-208ENST00000584773 C1orf220Q5T0J3 134 aa19.25■□□□□ 0.67
SRSF1-208ENST00000584773 ZNF687Q8N1G0 1237 aa19.25■□□□□ 0.67
SRSF1-208ENST00000584773 BCO2Q9BYV7 579 aa19.25■□□□□ 0.67
SRSF1-208ENST00000584773 SDCBP2Q9H190 292 aa19.25■□□□□ 0.67
SRSF1-208ENST00000584773 TMEM30AQ9NV96 361 aa19.25■□□□□ 0.67
SRSF1-208ENST00000584773 SPATA6Q9NWH7 488 aaPredicted RBP19.25■□□□□ 0.67
SRSF1-208ENST00000584773 MAGEC2Q9UBF1 373 aaPredicted RBP19.25■□□□□ 0.67
SRSF1-208ENST00000584773 PROB1E7EW31 1015 aa19.25■□□□□ 0.67
SRSF1-208ENST00000584773 CHADO15335 359 aa19.25■□□□□ 0.67
SRSF1-208ENST00000584773 TACC1O75410 805 aa19.25■□□□□ 0.67
SRSF1-208ENST00000584773 CCNE1P24864 410 aa19.25■□□□□ 0.67
SRSF1-208ENST00000584773 CACNA2D1P54289 1103 aa19.25■□□□□ 0.67
SRSF1-208ENST00000584773 CLDN10P78369 228 aa19.25■□□□□ 0.67
SRSF1-208ENST00000584773 NCOA4Q13772 614 aa19.25■□□□□ 0.67
SRSF1-208ENST00000584773 ZNF699Q32M78 642 aa19.25■□□□□ 0.67
SRSF1-208ENST00000584773 C4orf50Q6ZRC1 276 aa19.25■□□□□ 0.67
SRSF1-208ENST00000584773 CMTM8Q8IZV2 173 aa19.25■□□□□ 0.67
SRSF1-208ENST00000584773 FAM3CQ92520 227 aa19.25■□□□□ 0.67
SRSF1-208ENST00000584773 ERCC4Q92889 916 aaPredicted RBP19.25■□□□□ 0.67
SRSF1-208ENST00000584773 USP13Q92995 863 aaPredicted RBP19.25■□□□□ 0.67
SRSF1-208ENST00000584773 E2F7Q96AV8 911 aa19.25■□□□□ 0.67
SRSF1-208ENST00000584773 FUBP3Q96I24 572 aaKnown RBP eCLIP19.25■□□□□ 0.67
SRSF1-208ENST00000584773 TRPV5Q9NQA5 729 aa19.25■□□□□ 0.67
SRSF1-208ENST00000584773 GTSE1Q9NYZ3 720 aa19.25■□□□□ 0.67
SRSF1-208ENST00000584773 TRAF3IP3Q9Y228 551 aa19.25■□□□□ 0.67
SRSF1-208ENST00000584773 CLDN5O00501 218 aa19.24■□□□□ 0.67
SRSF1-208ENST00000584773 CALUO43852 315 aaPredicted RBP19.24■□□□□ 0.67
SRSF1-208ENST00000584773 STAU1O95793 577 aaKnown RBP19.24■□□□□ 0.67
SRSF1-208ENST00000584773 SP9P0CG40 484 aa19.24■□□□□ 0.67
SRSF1-208ENST00000584773 TRIM49P0CI25 452 aa19.24■□□□□ 0.67
SRSF1-208ENST00000584773 TRIM49CP0CI26 452 aa19.24■□□□□ 0.67
SRSF1-208ENST00000584773 NR2F2P24468 414 aa19.24■□□□□ 0.67
SRSF1-208ENST00000584773 MAGEA11P43364 429 aa19.24■□□□□ 0.67
SRSF1-208ENST00000584773 USP46P62068 366 aa19.24■□□□□ 0.67
SRSF1-208ENST00000584773 WDR44Q5JSH3 913 aa19.24■□□□□ 0.67
SRSF1-208ENST00000584773 SPOPLQ6IQ16 392 aa19.24■□□□□ 0.67
SRSF1-208ENST00000584773 TXNDC11Q6PKC3 985 aa19.24■□□□□ 0.67
SRSF1-208ENST00000584773 FMR1NBQ8N0W7 255 aaPredicted RBP19.24■□□□□ 0.67
SRSF1-208ENST00000584773 MYCBPAPQ8TBZ2 947 aa19.24■□□□□ 0.67
SRSF1-208ENST00000584773 BPIFB1Q8TDL5 484 aa19.24■□□□□ 0.67
SRSF1-208ENST00000584773 CSGALNACT1Q8TDX6 532 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms