RNA–Protein interactions for RNA: ENST00000584243.5

GGA3-218, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-218ENST00000584243 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.62□□□□□ -1.03
GGA3-218ENST00000584243 RAB17Q9H0T7 212 aa8.62□□□□□ -1.03
GGA3-218ENST00000584243 CARD9Q9H257 536 aa8.62□□□□□ -1.03
GGA3-218ENST00000584243 CHRDQ9H2X0 955 aa8.62□□□□□ -1.03
GGA3-218ENST00000584243 KIAA1586Q9HCI6 787 aa8.62□□□□□ -1.03
GGA3-218ENST00000584243 PDE11AQ9HCR9 933 aa8.62□□□□□ -1.03
GGA3-218ENST00000584243 ANKEF1Q9NU02 776 aa8.62□□□□□ -1.03
GGA3-218ENST00000584243 DMAC2Q9NW81 257 aa8.62□□□□□ -1.03
GGA3-218ENST00000584243 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.62□□□□□ -1.03
GGA3-218ENST00000584243 APEX2Q9UBZ4 518 aa8.62□□□□□ -1.03
GGA3-218ENST00000584243 PARP2Q9UGN5 583 aa8.62□□□□□ -1.03
GGA3-218ENST00000584243 NAGPAQ9UK23 515 aa8.62□□□□□ -1.03
GGA3-218ENST00000584243 CAPN6Q9Y6Q1 641 aa8.62□□□□□ -1.03
GGA3-218ENST00000584243 F5P12259 2224 aa8.62□□□□□ -1.03
GGA3-218ENST00000584243 MYH4Q9Y623 1939 aa8.62□□□□□ -1.03
GGA3-218ENST00000584243 TSC2P49815 1807 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 NCANO14594 1321 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 WDR64B1ANS9 1081 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 K7ESF4 209 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 ZNF263O14978 683 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 SART1O43290 800 aaKnown RBP8.61□□□□□ -1.03
GGA3-218ENST00000584243 ZBED4O75132 1171 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 SLITRK3O94933 977 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 SEC31AO94979 1220 aaKnown RBP8.61□□□□□ -1.03
GGA3-218ENST00000584243 CFBP00751 764 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 CHRNA1P02708 482 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 TXNP10599 105 aaKnown RBP8.61□□□□□ -1.03
GGA3-218ENST00000584243 ITPKBP27987 946 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 GBP2P32456 591 aaPredicted RBP8.61□□□□□ -1.03
GGA3-218ENST00000584243 MAN1A1P33908 653 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 CNR2P34972 360 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 MPLP40238 635 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 QARSP47897 775 aaKnown RBP8.61□□□□□ -1.03
GGA3-218ENST00000584243 FMO5P49326 533 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 EIF3BP55884 814 aaKnown RBP8.61□□□□□ -1.03
GGA3-218ENST00000584243 SIM1P81133 766 aaPredicted RBP8.61□□□□□ -1.03
GGA3-218ENST00000584243 GFPT1Q06210 699 aaPredicted RBP8.61□□□□□ -1.03
GGA3-218ENST00000584243 BFSP1Q12934 665 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 GAS6Q14393 721 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 LPIN1Q14693 890 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 DCAF17Q5H9S7 520 aaPredicted RBP8.61□□□□□ -1.03
GGA3-218ENST00000584243 ODR4Q5SWX8 454 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 TCERG1LQ5VWI1 586 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 DAB2IPQ5VWQ8 1189 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 C11orf63Q6NUN7 778 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 CCDC62Q6P9F0 684 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 CEP128Q6ZU80 1094 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 SLFN11Q7Z7L1 901 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 NLRX1Q86UT6 975 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 NPAS4Q8IUM7 802 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 CD302Q8IX05 232 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 NELFCDQ8IXH7 590 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 DHX37Q8IY37 1157 aaKnown RBP8.61□□□□□ -1.03
GGA3-218ENST00000584243 C4orf19Q8IY42 314 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 EXOC8Q8IYI6 725 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 SYCP3Q8IZU3 236 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 UBL4BQ8N7F7 174 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 ATP6V0A1Q93050 837 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 LOXL4Q96JB6 756 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 SENP7Q9BQF6 1050 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 LXNQ9BS40 222 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 TLR10Q9BXR5 811 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 CWH43Q9H720 699 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 NLRC4Q9NPP4 1024 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 AGPAT3Q9NRZ7 376 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 VPS18Q9P253 973 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 NXF1Q9UBU9 619 aaKnown RBP8.61□□□□□ -1.03
GGA3-218ENST00000584243 RASAL2Q9UJF2 1139 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 CCPG1Q9ULG6 757 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 HPCAL4Q9UM19 191 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 ATG2BQ96BY7 2078 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 ZMYM2Q9UBW7 1377 aa8.61□□□□□ -1.03
GGA3-218ENST00000584243 ATXN2Q99700 1313 aaKnown RBP8.6□□□□□ -1.03
GGA3-218ENST00000584243 FNDC1Q4ZHG4 1894 aaPredicted RBP8.6□□□□□ -1.03
GGA3-218ENST00000584243 ANKRD62A6NC57 917 aa8.6□□□□□ -1.03
GGA3-218ENST00000584243 GOLGA6CA6NDK9 693 aa8.6□□□□□ -1.03
GGA3-218ENST00000584243 CAPN8A6NHC0 703 aa8.6□□□□□ -1.03
GGA3-218ENST00000584243 HMGB1P1B2RPK0 211 aaPredicted RBP8.6□□□□□ -1.03
GGA3-218ENST00000584243 F8VZ95 297 aa8.6□□□□□ -1.03
GGA3-218ENST00000584243 EXOC3O60645 756 aa8.6□□□□□ -1.03
GGA3-218ENST00000584243 RNF40O75150 1001 aa8.6□□□□□ -1.03
GGA3-218ENST00000584243 CAND2O75155 1236 aa8.6□□□□□ -1.03
GGA3-218ENST00000584243 PALMO75781 387 aa8.6□□□□□ -1.03
GGA3-218ENST00000584243 AKAP3O75969 853 aa8.6□□□□□ -1.03
GGA3-218ENST00000584243 MOCS3O95396 460 aa8.6□□□□□ -1.03
GGA3-218ENST00000584243 GOLGA6DP0CG33 693 aa8.6□□□□□ -1.03
GGA3-218ENST00000584243 GZMAP12544 262 aa8.6□□□□□ -1.03
GGA3-218ENST00000584243 PLS3P13797 630 aa8.6□□□□□ -1.03
GGA3-218ENST00000584243 KLK7P49862 253 aa8.6□□□□□ -1.03
GGA3-218ENST00000584243 PSMC5P62195 406 aa8.6□□□□□ -1.03
GGA3-218ENST00000584243 MYL7Q01449 175 aa8.6□□□□□ -1.03
GGA3-218ENST00000584243 PTK2Q05397 1052 aa8.6□□□□□ -1.03
GGA3-218ENST00000584243 BIRC3Q13489 604 aa8.6□□□□□ -1.03
GGA3-218ENST00000584243 DHX34Q14147 1143 aaKnown RBP8.6□□□□□ -1.03
GGA3-218ENST00000584243 ZSCAN26Q16670 478 aa8.6□□□□□ -1.03
GGA3-218ENST00000584243 EMC10Q5UCC4 262 aa8.6□□□□□ -1.03
GGA3-218ENST00000584243 HIST2H2BCQ6DN03 193 aa8.6□□□□□ -1.03
GGA3-218ENST00000584243 ZNF746Q6NUN9 644 aaPredicted RBP8.6□□□□□ -1.03
GGA3-218ENST00000584243 RSPO2Q6UXX9 243 aaPredicted RBP8.6□□□□□ -1.03
GGA3-218ENST00000584243 MIER3Q7Z3K6 550 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms