RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 FBXL18Q96ME1 805 aa12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 TTC1Q99614 292 aa12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 TLR10Q9BXR5 811 aa12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 NHEJ1Q9H9Q4 299 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 C12orf10Q9HB07 376 aa12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 MTRF1LQ9UGC7 380 aaKnown RBP12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 PCSK1NQ9UHG2 260 aa12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 ATPIF1Q9UII2 106 aa12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 PCDHGA8Q9Y5G5 932 aa12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 ZSCAN5BA6NJL1 495 aa12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 SOBPA7XYQ1 873 aa12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 ZNF254O75437 659 aa12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 CRABP2P29373 138 aa12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 ADSLP30566 484 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 ENTPD1P49961 510 aa12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 DSTNP60981 165 aa12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 TSPY1Q01534 308 aa12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 MKRN3Q13064 507 aaKnown RBP12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 DPYSQ14117 519 aa12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 TMEM63BQ5T3F8 832 aa12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 ZNF449Q6P9G9 518 aa12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 PPP1R21Q6ZMI0 780 aa12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 APOBEC3FQ8IUX4 373 aaKnown RBP12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 ELMOD1Q8N336 334 aa12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 PPP4R1Q8TF05 950 aa12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 WNK4Q96J92 1243 aa12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 PCMTD1Q96MG8 357 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 ACAP3Q96P50 834 aa12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 TUBGCP2Q9BSJ2 902 aa12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 EBF3Q9H4W6 596 aa12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 HOMER2Q9NSB8 354 aa12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 VPS51Q9UID3 782 aa12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 SALL4Q9UJQ4 1053 aa12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 DSEQ9UL01 958 aa12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 NOSIPQ9Y314 301 aaKnown RBP12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 PCDHA1Q9Y5I3 950 aa12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 WASF2Q9Y6W5 498 aa12.45□□□□□ -0.42
CDK5RAP3-232ENST00000584168 MCF2LO15068 1137 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 RGS16O15492 202 aaPredicted RBP12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 AQP9O43315 295 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 KLRC4O43908 158 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 CALML3P27482 149 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 EPHX2P34913 555 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 MED21Q13503 144 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 MEA1Q16626 185 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 LETM2Q2VYF4 491 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 NADK2Q4G0N4 442 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 LLGL2Q6P1M3 1020 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 CCDC62Q6P9F0 684 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 SLC51BQ86UW2 128 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 HACE1Q8IYU2 909 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 CSGALNACT2Q8N6G5 542 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 DCPSQ96C86 337 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 ASIC4Q96FT7 647 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 CALN1Q9BXU9 219 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 NLRC4Q9NPP4 1024 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 AIPL1Q9NZN9 384 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 PRR12Q9ULL5 1215 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 MAFFQ9ULX9 164 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 PCDHA4Q9UN74 947 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 WDR90Q96KV7 1748 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 SCN4AP35499 1836 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 GRID2IPA4D2P6 1211 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 POTECB2RU33 542 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 K7EPI3 171 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 DDX3XO00571 662 aaKnown RBP eCLIP12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 BAIAP3O94812 1187 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 T-ENOLP0DO92 83 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 CTRB1P17538 263 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 PTPN4P29074 926 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 UBXN2AP68543 259 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 IFI35P80217 286 aaPredicted RBP12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 GBE1Q04446 702 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 CDC16Q13042 620 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 CTRB2Q6GPI1 263 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 TTI2Q6NXR4 508 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 DHRS4L2Q6PKH6 230 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 SLC30A10Q6XR72 485 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 CYP4V2Q6ZWL3 525 aaPredicted RBP12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 MIER3Q7Z3K6 550 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 MMAAQ8IVH4 418 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 SULF1Q8IWU6 871 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 KLHL7Q8IXQ5 586 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 GIMAP8Q8ND71 665 aaPredicted RBP12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 C7orf57Q8NEG2 295 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 PIP4K2CQ8TBX8 421 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 FAM20AQ96MK3 541 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 INPP4AQ96PE3 977 aaPredicted RBP12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 CIB1Q99828 191 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 IER2Q9BTL4 223 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 TMEM60Q9H2L4 133 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 TMX2Q9Y320 296 aa12.44□□□□□ -0.42
CDK5RAP3-232ENST00000584168 CCDC194A0A1B0GVG4 234 aa12.43□□□□□ -0.42
CDK5RAP3-232ENST00000584168 TLDC2A0PJX2 215 aa12.43□□□□□ -0.42
CDK5RAP3-232ENST00000584168 DNAJC6O75061 913 aa12.43□□□□□ -0.42
CDK5RAP3-232ENST00000584168 RHOBTB3O94955 611 aa12.43□□□□□ -0.42
CDK5RAP3-232ENST00000584168 TFAP2AP05549 437 aa12.43□□□□□ -0.42
CDK5RAP3-232ENST00000584168 ASNSP08243 561 aa12.43□□□□□ -0.42
CDK5RAP3-232ENST00000584168 SMIM18P0DKX4 95 aa12.43□□□□□ -0.42
CDK5RAP3-232ENST00000584168 PHKA2P46019 1235 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms