RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 SLC39A4Q6P5W5 647 aa12.04□□□□□ -0.48
CCDC47-206ENST00000584112 PKN3Q6P5Z2 889 aa12.04□□□□□ -0.48
CCDC47-206ENST00000584112 ZNF720Q7Z2F6 126 aa12.04□□□□□ -0.48
CCDC47-206ENST00000584112 USP37Q86T82 979 aa12.04□□□□□ -0.48
CCDC47-206ENST00000584112 SFR1Q86XK3 245 aa12.04□□□□□ -0.48
CCDC47-206ENST00000584112 FAM212AQ96EL1 285 aa12.04□□□□□ -0.48
CCDC47-206ENST00000584112 MCRS1Q96EZ8 462 aa12.04□□□□□ -0.48
CCDC47-206ENST00000584112 CLIC6Q96NY7 704 aa12.04□□□□□ -0.48
CCDC47-206ENST00000584112 USP28Q96RU2 1077 aa12.04□□□□□ -0.48
CCDC47-206ENST00000584112 TRIM4Q9C037 500 aa12.04□□□□□ -0.48
CCDC47-206ENST00000584112 ASB7Q9H672 318 aa12.04□□□□□ -0.48
CCDC47-206ENST00000584112 MRPL44Q9H9J2 332 aaKnown RBP12.04□□□□□ -0.48
CCDC47-206ENST00000584112 POLR3BQ9NW08 1133 aaPredicted RBP12.04□□□□□ -0.48
CCDC47-206ENST00000584112 ANKMY1Q9P2S6 941 aa12.04□□□□□ -0.48
CCDC47-206ENST00000584112 DKK4Q9UBT3 224 aa12.04□□□□□ -0.48
CCDC47-206ENST00000584112 AFF4Q9UHB7 1163 aaKnown RBP12.04□□□□□ -0.48
CCDC47-206ENST00000584112 CPSF3Q9UKF6 684 aaKnown RBP12.04□□□□□ -0.48
CCDC47-206ENST00000584112 AGO2Q9UKV8 859 aaKnown RBP12.04□□□□□ -0.48
CCDC47-206ENST00000584112 EXOC7Q9UPT5 735 aa12.04□□□□□ -0.48
CCDC47-206ENST00000584112 DERAQ9Y315 318 aa12.04□□□□□ -0.48
CCDC47-206ENST00000584112 MRPS23Q9Y3D9 190 aaKnown RBP12.04□□□□□ -0.48
CCDC47-206ENST00000584112 PAXBP1Q9Y5B6 917 aa12.04□□□□□ -0.48
CCDC47-206ENST00000584112 INSL5Q9Y5Q6 135 aa12.04□□□□□ -0.48
CCDC47-206ENST00000584112 ITPR2Q14571 2701 aa12.03□□□□□ -0.48
CCDC47-206ENST00000584112 USP9YO00507 2555 aaPredicted RBP12.03□□□□□ -0.48
CCDC47-206ENST00000584112 CAPN8A6NHC0 703 aa12.03□□□□□ -0.48
CCDC47-206ENST00000584112 B8ZZF3 427 aa12.03□□□□□ -0.48
CCDC47-206ENST00000584112 ZNF197O14709 1029 aa12.03□□□□□ -0.48
CCDC47-206ENST00000584112 OAZ2O95190 189 aa12.03□□□□□ -0.48
CCDC47-206ENST00000584112 RHOP08100 348 aa12.03□□□□□ -0.48
CCDC47-206ENST00000584112 PDIA4P13667 645 aaKnown RBP12.03□□□□□ -0.48
CCDC47-206ENST00000584112 AARSP49588 968 aaKnown RBP eCLIP12.03□□□□□ -0.48
CCDC47-206ENST00000584112 ALCAMQ13740 583 aa12.03□□□□□ -0.48
CCDC47-206ENST00000584112 TMEM132DQ14C87 1099 aa12.03□□□□□ -0.48
CCDC47-206ENST00000584112 STK38Q15208 465 aa12.03□□□□□ -0.48
CCDC47-206ENST00000584112 ELF2Q15723 593 aa12.03□□□□□ -0.48
CCDC47-206ENST00000584112 ZC2HC1CQ53FD0 456 aaPredicted RBP12.03□□□□□ -0.48
CCDC47-206ENST00000584112 SPATA1Q5VX52 437 aa12.03□□□□□ -0.48
CCDC47-206ENST00000584112 JADE1Q6IE81 842 aa12.03□□□□□ -0.48
CCDC47-206ENST00000584112 IQCEQ6IPM2 695 aa12.03□□□□□ -0.48
CCDC47-206ENST00000584112 DSTYKQ6XUX3 929 aa12.03□□□□□ -0.48
CCDC47-206ENST00000584112 ADAMTS14Q8WXS8 1223 aa12.03□□□□□ -0.48
CCDC47-206ENST00000584112 ZNF396Q96N95 335 aaPredicted RBP12.03□□□□□ -0.48
CCDC47-206ENST00000584112 OLFML3Q9NRN5 406 aa12.03□□□□□ -0.48
CCDC47-206ENST00000584112 GDE1Q9NZC3 331 aa12.03□□□□□ -0.48
CCDC47-206ENST00000584112 NXF1Q9UBU9 619 aaKnown RBP12.03□□□□□ -0.48
CCDC47-206ENST00000584112 STYXL1Q9Y6J8 313 aa12.03□□□□□ -0.48
CCDC47-206ENST00000584112 SETD2Q9BYW2 2564 aaPredicted RBP12.03□□□□□ -0.48
CCDC47-206ENST00000584112 MYH10P35580 1976 aa12.02□□□□□ -0.49
CCDC47-206ENST00000584112 MYMKA6NI61 221 aa12.02□□□□□ -0.49
CCDC47-206ENST00000584112 OR6C75A6NL08 312 aa12.02□□□□□ -0.49
CCDC47-206ENST00000584112 ANKRD63C9JTQ0 380 aa12.02□□□□□ -0.49
CCDC47-206ENST00000584112 PPP1R37O75864 691 aa12.02□□□□□ -0.49
CCDC47-206ENST00000584112 SEC24AO95486 1093 aa12.02□□□□□ -0.49
CCDC47-206ENST00000584112 ODC1P11926 461 aa12.02□□□□□ -0.49
CCDC47-206ENST00000584112 GP1BBP13224 206 aa12.02□□□□□ -0.49
CCDC47-206ENST00000584112 TYMPP19971 482 aa12.02□□□□□ -0.49
CCDC47-206ENST00000584112 SOX9P48436 509 aa12.02□□□□□ -0.49
CCDC47-206ENST00000584112 NASPP49321 788 aaPredicted RBP12.02□□□□□ -0.49
CCDC47-206ENST00000584112 ACOT2P49753 483 aa12.02□□□□□ -0.49
CCDC47-206ENST00000584112 VASPP50552 380 aaPredicted RBP12.02□□□□□ -0.49
CCDC47-206ENST00000584112 GUCY2FP51841 1108 aa12.02□□□□□ -0.49
CCDC47-206ENST00000584112 PLD1Q13393 1074 aa12.02□□□□□ -0.49
CCDC47-206ENST00000584112 LRRC32Q14392 662 aa12.02□□□□□ -0.49
CCDC47-206ENST00000584112 PDZD4Q76G19 769 aaPredicted RBP12.02□□□□□ -0.49
CCDC47-206ENST00000584112 NT5DC4Q86YG4 428 aa12.02□□□□□ -0.49
CCDC47-206ENST00000584112 FMNL3Q8IVF7 1028 aa12.02□□□□□ -0.49
CCDC47-206ENST00000584112 LEMD2Q8NC56 503 aa12.02□□□□□ -0.49
CCDC47-206ENST00000584112 POMGNT1Q8WZA1 660 aa12.02□□□□□ -0.49
CCDC47-206ENST00000584112 SNX21Q969T3 373 aa12.02□□□□□ -0.49
CCDC47-206ENST00000584112 DNAJC19Q96DA6 116 aa12.02□□□□□ -0.49
CCDC47-206ENST00000584112 ZNF512Q96ME7 567 aaPredicted RBP12.02□□□□□ -0.49
CCDC47-206ENST00000584112 CAMK1GQ96NX5 476 aa12.02□□□□□ -0.49
CCDC47-206ENST00000584112 ACCSQ96QU6 501 aa12.02□□□□□ -0.49
CCDC47-206ENST00000584112 CORO1BQ9BR76 489 aa12.02□□□□□ -0.49
CCDC47-206ENST00000584112 ZNF334Q9HCZ1 680 aaPredicted RBP12.02□□□□□ -0.49
CCDC47-206ENST00000584112 INVSQ9Y283 1065 aa12.02□□□□□ -0.49
CCDC47-206ENST00000584112 C2CD2Q9Y426 696 aa12.02□□□□□ -0.49
CCDC47-206ENST00000584112 PCDHB13Q9Y5F0 798 aa12.02□□□□□ -0.49
CCDC47-206ENST00000584112 FBN3Q75N90 2809 aa12.02□□□□□ -0.49
CCDC47-206ENST00000584112 TISP43B9A030 160 aa12.01□□□□□ -0.49
CCDC47-206ENST00000584112 PPP6R2O75170 966 aa12.01□□□□□ -0.49
CCDC47-206ENST00000584112 AKAP3O75969 853 aa12.01□□□□□ -0.49
CCDC47-206ENST00000584112 RHOBTB1O94844 696 aa12.01□□□□□ -0.49
CCDC47-206ENST00000584112 MICAL2O94851 1124 aa12.01□□□□□ -0.49
CCDC47-206ENST00000584112 IL18RAPO95256 599 aa12.01□□□□□ -0.49
CCDC47-206ENST00000584112 GCNT3O95395 438 aa12.01□□□□□ -0.49
CCDC47-206ENST00000584112 LDHAP00338 332 aaKnown RBP12.01□□□□□ -0.49
CCDC47-206ENST00000584112 HSP90AA1P07900 732 aaKnown RBP12.01□□□□□ -0.49
CCDC47-206ENST00000584112 NFICP08651 508 aa12.01□□□□□ -0.49
CCDC47-206ENST00000584112 FTH1P19P0C7X4 201 aa12.01□□□□□ -0.49
CCDC47-206ENST00000584112 IDEP14735 1019 aa12.01□□□□□ -0.49
CCDC47-206ENST00000584112 FCARP24071 287 aa12.01□□□□□ -0.49
CCDC47-206ENST00000584112 LILRA4P59901 499 aa12.01□□□□□ -0.49
CCDC47-206ENST00000584112 MYBPC2Q14324 1141 aa12.01□□□□□ -0.49
CCDC47-206ENST00000584112 SLC5A9Q2M3M2 681 aa12.01□□□□□ -0.49
CCDC47-206ENST00000584112 L1TD1Q5T7N2 865 aaKnown RBP12.01□□□□□ -0.49
CCDC47-206ENST00000584112 CYP4A22Q5TCH4 519 aa12.01□□□□□ -0.49
CCDC47-206ENST00000584112 C9orf57Q5W0N0 161 aa12.01□□□□□ -0.49
CCDC47-206ENST00000584112 OVOS1Q6IE37 1185 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms