RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 PHLDB3Q6NSJ2 640 aa21.82■■□□□ 1.08
SS18-224ENST00000584083 VITQ6UXI7 678 aa21.82■■□□□ 1.08
SS18-224ENST00000584083 INTS8Q75QN2 995 aaKnown RBP21.82■■□□□ 1.08
SS18-224ENST00000584083 SV2AQ7L0J3 742 aa21.82■■□□□ 1.08
SS18-224ENST00000584083 ARID3BQ8IVW6 561 aaPredicted RBP21.82■■□□□ 1.08
SS18-224ENST00000584083 MYLPFQ96A32 169 aa21.82■■□□□ 1.08
SS18-224ENST00000584083 E2F7Q96AV8 911 aa21.82■■□□□ 1.08
SS18-224ENST00000584083 ELMO3Q96BJ8 720 aa21.82■■□□□ 1.08
SS18-224ENST00000584083 PTPRDP23468 1912 aa21.81■■□□□ 1.08
SS18-224ENST00000584083 HEPACAM2A8MVW5 462 aa21.81■■□□□ 1.08
SS18-224ENST00000584083 A8MXQ7 604 aa21.81■■□□□ 1.08
SS18-224ENST00000584083 GALR2O43603 387 aaPredicted RBP21.81■■□□□ 1.08
SS18-224ENST00000584083 HMGA1P17096 107 aaKnown RBP21.81■■□□□ 1.08
SS18-224ENST00000584083 GDI1P31150 447 aa21.81■■□□□ 1.08
SS18-224ENST00000584083 NHLH1Q02575 133 aa21.81■■□□□ 1.08
SS18-224ENST00000584083 EDRF1Q3B7T1 1238 aa21.81■■□□□ 1.08
SS18-224ENST00000584083 ZCWPW2Q504Y3 356 aa21.81■■□□□ 1.08
SS18-224ENST00000584083 MDH1BQ5I0G3 518 aa21.81■■□□□ 1.08
SS18-224ENST00000584083 SCARA5Q6ZMJ2 495 aa21.81■■□□□ 1.08
SS18-224ENST00000584083 YAF2Q8IY57 180 aa21.81■■□□□ 1.08
SS18-224ENST00000584083 MYCBPAPQ8TBZ2 947 aa21.81■■□□□ 1.08
SS18-224ENST00000584083 DEPDC1BQ8WUY9 529 aa21.81■■□□□ 1.08
SS18-224ENST00000584083 TASP1Q9H6P5 420 aa21.81■■□□□ 1.08
SS18-224ENST00000584083 SMYD3Q9H7B4 428 aa21.81■■□□□ 1.08
SS18-224ENST00000584083 VRTNQ9H8Y1 702 aa21.81■■□□□ 1.08
SS18-224ENST00000584083 NME7Q9Y5B8 376 aa21.81■■□□□ 1.08
SS18-224ENST00000584083 MIA3Q5JRA6 1907 aa21.8■■□□□ 1.08
SS18-224ENST00000584083 OBSL1O75147 1896 aa21.8■■□□□ 1.08
SS18-224ENST00000584083 SLC38A8A6NNN8 435 aa21.8■■□□□ 1.08
SS18-224ENST00000584083 DPYSL4O14531 572 aa21.8■■□□□ 1.08
SS18-224ENST00000584083 GADD45BO75293 160 aaPredicted RBP21.8■■□□□ 1.08
SS18-224ENST00000584083 TRIM49P0CI25 452 aa21.8■■□□□ 1.08
SS18-224ENST00000584083 TRIM49CP0CI26 452 aa21.8■■□□□ 1.08
SS18-224ENST00000584083 P4HA1P13674 534 aa21.8■■□□□ 1.08
SS18-224ENST00000584083 PTPN1P18031 435 aaKnown RBP21.8■■□□□ 1.08
SS18-224ENST00000584083 BDNFP23560 247 aa21.8■■□□□ 1.08
SS18-224ENST00000584083 PIK3CAP42336 1068 aa21.8■■□□□ 1.08
SS18-224ENST00000584083 MAGEA11P43364 429 aa21.8■■□□□ 1.08
SS18-224ENST00000584083 CDH8P55286 799 aa21.8■■□□□ 1.08
SS18-224ENST00000584083 NLRP12P59046 1061 aa21.8■■□□□ 1.08
SS18-224ENST00000584083 STARD6P59095 220 aa21.8■■□□□ 1.08
SS18-224ENST00000584083 PRKCQQ04759 706 aa21.8■■□□□ 1.08
SS18-224ENST00000584083 TCF15Q12870 199 aa21.8■■□□□ 1.08
SS18-224ENST00000584083 C1orf220Q5T0J3 134 aa21.8■■□□□ 1.08
SS18-224ENST00000584083 MFSD6LQ8IWD5 586 aa21.8■■□□□ 1.08
SS18-224ENST00000584083 IRF7Q92985 503 aa21.8■■□□□ 1.08
SS18-224ENST00000584083 EEF2KMTQ96G04 330 aa21.8■■□□□ 1.08
SS18-224ENST00000584083 PCED1BQ96HM7 432 aa21.8■■□□□ 1.08
SS18-224ENST00000584083 TSG101Q99816 390 aa21.8■■□□□ 1.08
SS18-224ENST00000584083 MKNK1Q9BUB5 465 aa21.8■■□□□ 1.08
SS18-224ENST00000584083 GTPBP4Q9BZE4 634 aaKnown RBP21.8■■□□□ 1.08
SS18-224ENST00000584083 MMRN2Q9H8L6 949 aa21.8■■□□□ 1.08
SS18-224ENST00000584083 SIT1Q9Y3P8 196 aa21.8■■□□□ 1.08
SS18-224ENST00000584083 GREB1Q4ZG55 1949 aa21.8■■□□□ 1.08
SS18-224ENST00000584083 TICRRQ7Z2Z1 1910 aa21.79■■□□□ 1.08
SS18-224ENST00000584083 ZNF263O14978 683 aa21.79■■□□□ 1.08
SS18-224ENST00000584083 CETN3O15182 167 aa21.79■■□□□ 1.08
SS18-224ENST00000584083 HLA-DRAP01903 254 aa21.79■■□□□ 1.08
SS18-224ENST00000584083 F11P03951 625 aa21.79■■□□□ 1.08
SS18-224ENST00000584083 GRIK1P39086 918 aa21.79■■□□□ 1.08
SS18-224ENST00000584083 RAP1GAPP47736 663 aa21.79■■□□□ 1.08
SS18-224ENST00000584083 VSTM1Q6UX27 236 aa21.79■■□□□ 1.08
SS18-224ENST00000584083 SPATA20Q8TB22 786 aa21.79■■□□□ 1.08
SS18-224ENST00000584083 MRPS31Q92665 395 aaKnown RBP21.79■■□□□ 1.08
SS18-224ENST00000584083 TAF4BQ92750 862 aa21.79■■□□□ 1.08
SS18-224ENST00000584083 DNASE1L2Q92874 299 aa21.79■■□□□ 1.08
SS18-224ENST00000584083 RSPRY1Q96DX4 576 aa21.79■■□□□ 1.08
SS18-224ENST00000584083 FOXQ1Q9C009 403 aa21.79■■□□□ 1.08
SS18-224ENST00000584083 DPEP3Q9H4B8 488 aa21.79■■□□□ 1.08
SS18-224ENST00000584083 CHMP5Q9NZZ3 219 aa21.79■■□□□ 1.08
SS18-224ENST00000584083 UXTQ9UBK9 157 aaPredicted RBP21.79■■□□□ 1.08
SS18-224ENST00000584083 NOL4O94818 638 aa21.78■■□□□ 1.08
SS18-224ENST00000584083 EPB41P11171 864 aaKnown RBP21.78■■□□□ 1.08
SS18-224ENST00000584083 ANXA13P27216 316 aa21.78■■□□□ 1.08
SS18-224ENST00000584083 GCLMP48507 274 aa21.78■■□□□ 1.08
SS18-224ENST00000584083 ISM2Q6H9L7 571 aa21.78■■□□□ 1.08
SS18-224ENST00000584083 TPRG1Q6ZUI0 275 aa21.78■■□□□ 1.08
SS18-224ENST00000584083 DTWD2Q8NBA8 298 aa21.78■■□□□ 1.08
SS18-224ENST00000584083 B3GALNT2Q8NCR0 500 aa21.78■■□□□ 1.08
SS18-224ENST00000584083 SLC46A2Q9BY10 475 aa21.78■■□□□ 1.08
SS18-224ENST00000584083 IRF2BPLQ9H1B7 796 aa21.78■■□□□ 1.08
SS18-224ENST00000584083 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.78■■□□□ 1.086e-16■■■■■ 187.5
SS18-224ENST00000584083 HEBP1Q9NRV9 189 aa21.78■■□□□ 1.08
SS18-224ENST00000584083 ZMYM5Q9UJ78 669 aa21.78■■□□□ 1.08
SS18-224ENST00000584083 COL4A3Q01955 1670 aa21.78■■□□□ 1.08
SS18-224ENST00000584083 NCANO14594 1321 aa21.78■■□□□ 1.08
SS18-224ENST00000584083 KANSL1LA0AUZ9 987 aa21.77■■□□□ 1.08
SS18-224ENST00000584083 H0Y858 1186 aa21.77■■□□□ 1.08
SS18-224ENST00000584083 DCNP07585 359 aaKnown RBP21.77■■□□□ 1.08
SS18-224ENST00000584083 CD72P21854 359 aa21.77■■□□□ 1.08
SS18-224ENST00000584083 ANP32AP39687 249 aaKnown RBP21.77■■□□□ 1.08
SS18-224ENST00000584083 ENPEPQ07075 957 aa21.77■■□□□ 1.08
SS18-224ENST00000584083 PPP3CAQ08209 521 aa21.77■■□□□ 1.08
SS18-224ENST00000584083 STIM1Q13586 685 aa21.77■■□□□ 1.08
SS18-224ENST00000584083 UBXN2BQ14CS0 331 aa21.77■■□□□ 1.08
SS18-224ENST00000584083 COBLL1Q53SF7 1204 aa21.77■■□□□ 1.08
SS18-224ENST00000584083 TMEM150AQ86TG1 271 aa21.77■■□□□ 1.08
SS18-224ENST00000584083 ELOA2Q8IYF1 753 aaPredicted RBP21.77■■□□□ 1.08
SS18-224ENST00000584083 CCDC105Q8IYK2 499 aa21.77■■□□□ 1.08
SS18-224ENST00000584083 MAB21L3Q8N8X9 362 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms