RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 FAM26FQ5R3K3 315 aa16.83■□□□□ 0.28
SKA2-209ENST00000583976 KIAA1549LQ6ZVL6 1849 aa16.83■□□□□ 0.28
SKA2-209ENST00000583976 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.83■□□□□ 0.28
SKA2-209ENST00000583976 METTL23Q86XA0 190 aa16.83■□□□□ 0.28
SKA2-209ENST00000583976 GPR161Q8N6U8 529 aaKnown RBP16.83■□□□□ 0.28
SKA2-209ENST00000583976 CELF5Q8N6W0 485 aaKnown RBP16.83■□□□□ 0.28
SKA2-209ENST00000583976 FAM213AQ9BRX8 229 aa16.83■□□□□ 0.28
SKA2-209ENST00000583976 ST6GALNAC4Q9H4F1 302 aa16.83■□□□□ 0.28
SKA2-209ENST00000583976 SLC39A2Q9NP94 309 aa16.83■□□□□ 0.28
SKA2-209ENST00000583976 EXOC1Q9NV70 894 aa16.83■□□□□ 0.28
SKA2-209ENST00000583976 POLR3BQ9NW08 1133 aaPredicted RBP16.83■□□□□ 0.28
SKA2-209ENST00000583976 OBP2AQ9NY56 170 aa16.83■□□□□ 0.28
SKA2-209ENST00000583976 HSFX1Q9UBD0 423 aa16.83■□□□□ 0.28
SKA2-209ENST00000583976 DSEQ9UL01 958 aa16.83■□□□□ 0.28
SKA2-209ENST00000583976 L1RE1Q9UN81 338 aa16.83■□□□□ 0.28
SKA2-209ENST00000583976 PCDHB13Q9Y5F0 798 aa16.83■□□□□ 0.28
SKA2-209ENST00000583976 EML5Q05BV3 1969 aa16.82■□□□□ 0.28
SKA2-209ENST00000583976 MYO16Q9Y6X6 1858 aa16.82■□□□□ 0.28
SKA2-209ENST00000583976 GOLGA6L22H0YM25 854 aa16.82■□□□□ 0.28
SKA2-209ENST00000583976 PRPF6O94906 941 aaKnown RBP16.82■□□□□ 0.28
SKA2-209ENST00000583976 PAPSS2O95340 614 aaPredicted RBP16.82■□□□□ 0.28
SKA2-209ENST00000583976 FGF19O95750 216 aa16.82■□□□□ 0.28
SKA2-209ENST00000583976 ITGB3P05106 788 aa16.82■□□□□ 0.28
SKA2-209ENST00000583976 MYL1P05976 194 aa16.82■□□□□ 0.28
SKA2-209ENST00000583976 ARSAP15289 507 aa16.82■□□□□ 0.28
SKA2-209ENST00000583976 TUFMP49411 452 aaKnown RBP16.82■□□□□ 0.28
SKA2-209ENST00000583976 NLRP12P59046 1061 aa16.82■□□□□ 0.28
SKA2-209ENST00000583976 TFAMQ00059 246 aaKnown RBP16.82■□□□□ 0.28
SKA2-209ENST00000583976 SV2CQ496J9 727 aa16.82■□□□□ 0.28
SKA2-209ENST00000583976 C1orf228Q6PIY5 440 aa16.82■□□□□ 0.28
SKA2-209ENST00000583976 LONP2Q86WA8 852 aa16.82■□□□□ 0.28
SKA2-209ENST00000583976 PDCL2Q8N4E4 241 aa16.82■□□□□ 0.28
SKA2-209ENST00000583976 MAB21L3Q8N8X9 362 aa16.82■□□□□ 0.28
SKA2-209ENST00000583976 C1orf127Q8N9H9 656 aa16.82■□□□□ 0.28
SKA2-209ENST00000583976 SPPL2BQ8TCT7 592 aa16.82■□□□□ 0.28
SKA2-209ENST00000583976 USP13Q92995 863 aaPredicted RBP16.82■□□□□ 0.28
SKA2-209ENST00000583976 ZNF560Q96MR9 790 aa16.82■□□□□ 0.28
SKA2-209ENST00000583976 TIGD1Q96MW7 591 aa16.82■□□□□ 0.28
SKA2-209ENST00000583976 CNTNAP3BQ96NU0 1288 aa16.82■□□□□ 0.28
SKA2-209ENST00000583976 PI4K2AQ9BTU6 479 aa16.82■□□□□ 0.28
SKA2-209ENST00000583976 STRA6Q9BX79 667 aa16.82■□□□□ 0.28
SKA2-209ENST00000583976 CNTNAP3Q9BZ76 1288 aa16.82■□□□□ 0.28
SKA2-209ENST00000583976 ACACBO00763 2458 aa16.82■□□□□ 0.28
SKA2-209ENST00000583976 ZFHX4Q86UP3 3567 aa16.82■□□□□ 0.28
SKA2-209ENST00000583976 CACNA1BQ00975 2339 aa16.81■□□□□ 0.28
SKA2-209ENST00000583976 ATG2BQ96BY7 2078 aa16.81■□□□□ 0.28
SKA2-209ENST00000583976 RALGAPA1Q6GYQ0 2036 aa16.81■□□□□ 0.28
SKA2-209ENST00000583976 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.81■□□□□ 0.28
SKA2-209ENST00000583976 GOLGA8IPA6NC78 632 aa16.81■□□□□ 0.28
SKA2-209ENST00000583976 GOLGA8JA6NMD2 632 aa16.81■□□□□ 0.28
SKA2-209ENST00000583976 KPNA7A9QM74 516 aa16.81■□□□□ 0.28
SKA2-209ENST00000583976 PRR5-ARHGAP8B1AHC4 643 aa16.81■□□□□ 0.28
SKA2-209ENST00000583976 GDF9O60383 454 aa16.81■□□□□ 0.28
SKA2-209ENST00000583976 RETP07949 1114 aa16.81■□□□□ 0.28
SKA2-209ENST00000583976 ARHGAP8P85298 464 aa16.81■□□□□ 0.28
SKA2-209ENST00000583976 EHHADHQ08426 723 aa16.81■□□□□ 0.28
SKA2-209ENST00000583976 CCDC6Q16204 474 aa16.81■□□□□ 0.28
SKA2-209ENST00000583976 TAF12Q16514 161 aa16.81■□□□□ 0.28
SKA2-209ENST00000583976 ITPRIPL2Q3MIP1 535 aa16.81■□□□□ 0.28
SKA2-209ENST00000583976 DGKKQ5KSL6 1271 aa16.81■□□□□ 0.28
SKA2-209ENST00000583976 L1TD1Q5T7N2 865 aaKnown RBP16.81■□□□□ 0.28
SKA2-209ENST00000583976 TXNDC8Q6A555 127 aa16.81■□□□□ 0.28
SKA2-209ENST00000583976 SLFN12LQ6IEE8 588 aa16.81■□□□□ 0.28
SKA2-209ENST00000583976 FSTL4Q6MZW2 842 aa16.81■□□□□ 0.28
SKA2-209ENST00000583976 PRR23CQ6ZRP0 262 aa16.81■□□□□ 0.28
SKA2-209ENST00000583976 OSTM1Q86WC4 334 aa16.81■□□□□ 0.28
SKA2-209ENST00000583976 BRSK2Q8IWQ3 736 aa16.81■□□□□ 0.28
SKA2-209ENST00000583976 CMTM8Q8IZV2 173 aa16.81■□□□□ 0.28
SKA2-209ENST00000583976 FAM160A2Q8N612 972 aaPredicted RBP16.81■□□□□ 0.28
SKA2-209ENST00000583976 HVCN1Q96D96 273 aa16.81■□□□□ 0.28
SKA2-209ENST00000583976 ACCSQ96QU6 501 aa16.81■□□□□ 0.28
SKA2-209ENST00000583976 EBF3Q9H4W6 596 aa16.81■□□□□ 0.28
SKA2-209ENST00000583976 SEMA4GQ9NTN9 838 aa16.81■□□□□ 0.28
SKA2-209ENST00000583976 MAGED2Q9UNF1 606 aaPredicted RBP16.81■□□□□ 0.28
SKA2-209ENST00000583976 LAMA1P25391 3075 aa16.81■□□□□ 0.28
SKA2-209ENST00000583976 PTPRJQ12913 1337 aa16.8■□□□□ 0.28
SKA2-209ENST00000583976 PAX3P23760 479 aa16.8■□□□□ 0.28
SKA2-209ENST00000583976 ABCD1P33897 745 aa16.8■□□□□ 0.28
SKA2-209ENST00000583976 PLCB2Q00722 1185 aa16.8■□□□□ 0.28
SKA2-209ENST00000583976 BFSP1Q12934 665 aa16.8■□□□□ 0.28
SKA2-209ENST00000583976 CAMK4Q16566 473 aa16.8■□□□□ 0.28
SKA2-209ENST00000583976 LMBRD2Q68DH5 695 aaPredicted RBP16.8■□□□□ 0.28
SKA2-209ENST00000583976 SYCP3Q8IZU3 236 aa16.8■□□□□ 0.28
SKA2-209ENST00000583976 THEM5Q8N1Q8 247 aa16.8■□□□□ 0.28
SKA2-209ENST00000583976 CXorf38Q8TB03 319 aa16.8■□□□□ 0.28
SKA2-209ENST00000583976 NOC3LQ8WTT2 800 aaKnown RBP16.8■□□□□ 0.28
SKA2-209ENST00000583976 C2orf15Q8WU43 125 aaKnown RBP16.8■□□□□ 0.28
SKA2-209ENST00000583976 CCDC47Q96A33 483 aaKnown RBP16.8■□□□□ 0.28
SKA2-209ENST00000583976 FAM83CQ9BQN1 747 aa16.8■□□□□ 0.28
SKA2-209ENST00000583976 CBWD1Q9BRT8 395 aa16.8■□□□□ 0.28
SKA2-209ENST00000583976 RTKNQ9BST9 563 aa16.8■□□□□ 0.28
SKA2-209ENST00000583976 GKN1Q9NS71 199 aa16.8■□□□□ 0.28
SKA2-209ENST00000583976 RBAKQ9NYW8 714 aaPredicted RBP16.8■□□□□ 0.28
SKA2-209ENST00000583976 HOOK1Q9UJC3 728 aaKnown RBP16.8■□□□□ 0.28
SKA2-209ENST00000583976 PCDHB5Q9Y5E4 795 aa16.8■□□□□ 0.28
SKA2-209ENST00000583976 HELZP42694 1942 aaKnown RBP16.8■□□□□ 0.28
SKA2-209ENST00000583976 GREB1Q4ZG55 1949 aa16.8■□□□□ 0.28
SKA2-209ENST00000583976 SPAG17Q6Q759 2223 aa16.8■□□□□ 0.28
SKA2-209ENST00000583976 SDK1Q7Z5N4 2213 aa16.8■□□□□ 0.28
SKA2-209ENST00000583976 KMT2BQ9UMN6 2715 aaPredicted RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms