RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 WDR27A2RRH5 827 aa12.37□□□□□ -0.43
CDRT1-207ENST00000583965 HIDE1A8MVS5 230 aa12.37□□□□□ -0.43
CDRT1-207ENST00000583965 O00370 1275 aa12.37□□□□□ -0.43
CDRT1-207ENST00000583965 SOX1O00570 391 aaPredicted RBP12.37□□□□□ -0.43
CDRT1-207ENST00000583965 ADAM12O43184 909 aa12.37□□□□□ -0.43
CDRT1-207ENST00000583965 ABLIM3O94929 683 aa12.37□□□□□ -0.43
CDRT1-207ENST00000583965 OR4Q2P0C623 313 aa12.37□□□□□ -0.43
CDRT1-207ENST00000583965 ATF2P15336 505 aa12.37□□□□□ -0.43
CDRT1-207ENST00000583965 BRD2P25440 801 aaKnown RBP12.37□□□□□ -0.43
CDRT1-207ENST00000583965 KLRC2P26717 231 aa12.37□□□□□ -0.43
CDRT1-207ENST00000583965 IRS1P35568 1242 aa12.37□□□□□ -0.43
CDRT1-207ENST00000583965 ARPP19P56211 112 aa12.37□□□□□ -0.43
CDRT1-207ENST00000583965 CDK17Q00537 523 aa12.37□□□□□ -0.43
CDRT1-207ENST00000583965 CYP27A1Q02318 531 aa12.37□□□□□ -0.43
CDRT1-207ENST00000583965 KLHL30Q0D2K2 578 aa12.37□□□□□ -0.43
CDRT1-207ENST00000583965 CFAP221Q4G0U5 840 aa12.37□□□□□ -0.43
CDRT1-207ENST00000583965 PPP1R26Q5T8A7 1209 aaPredicted RBP12.37□□□□□ -0.43
CDRT1-207ENST00000583965 E4F1Q66K89 784 aaPredicted RBP12.37□□□□□ -0.43
CDRT1-207ENST00000583965 LCLAT1Q6UWP7 414 aa12.37□□□□□ -0.43
CDRT1-207ENST00000583965 SPATA2LQ8IUW3 424 aaPredicted RBP12.37□□□□□ -0.43
CDRT1-207ENST00000583965 C12orf29Q8N999 325 aa12.37□□□□□ -0.43
CDRT1-207ENST00000583965 TFAP2BQ92481 460 aa12.37□□□□□ -0.43
CDRT1-207ENST00000583965 DDX1Q92499 740 aaKnown RBP12.37□□□□□ -0.43
CDRT1-207ENST00000583965 MYLPFQ96A32 169 aa12.37□□□□□ -0.43
CDRT1-207ENST00000583965 PCED1BQ96HM7 432 aa12.37□□□□□ -0.43
CDRT1-207ENST00000583965 CDCA3Q99618 268 aaPredicted RBP12.37□□□□□ -0.43
CDRT1-207ENST00000583965 B3GNT5Q9BYG0 378 aa12.37□□□□□ -0.43
CDRT1-207ENST00000583965 FAM49BQ9NUQ9 324 aa12.37□□□□□ -0.43
CDRT1-207ENST00000583965 HESX1Q9UBX0 185 aa12.37□□□□□ -0.43
CDRT1-207ENST00000583965 AFF4Q9UHB7 1163 aaKnown RBP12.37□□□□□ -0.43
CDRT1-207ENST00000583965 NOCTQ9UK39 431 aaKnown RBP12.37□□□□□ -0.43
CDRT1-207ENST00000583965 PCDHGC3Q9UN70 934 aa12.37□□□□□ -0.43
CDRT1-207ENST00000583965 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.37□□□□□ -0.43
CDRT1-207ENST00000583965 OBSL1O75147 1896 aa12.36□□□□□ -0.43
CDRT1-207ENST00000583965 MTMR11A4FU01 709 aa12.36□□□□□ -0.43
CDRT1-207ENST00000583965 RFXAPO00287 272 aa12.36□□□□□ -0.43
CDRT1-207ENST00000583965 POU3F3P20264 500 aaPredicted RBP12.36□□□□□ -0.43
CDRT1-207ENST00000583965 ANXA13P27216 316 aa12.36□□□□□ -0.43
CDRT1-207ENST00000583965 MAGEA11P43364 429 aa12.36□□□□□ -0.43
CDRT1-207ENST00000583965 BCAT1P54687 386 aa12.36□□□□□ -0.43
CDRT1-207ENST00000583965 SLC8A3P57103 927 aa12.36□□□□□ -0.43
CDRT1-207ENST00000583965 CDR2Q01850 454 aa12.36□□□□□ -0.43
CDRT1-207ENST00000583965 HABP4Q5JVS0 413 aaKnown RBP12.36□□□□□ -0.43
CDRT1-207ENST00000583965 HGSNATQ68CP4 663 aa12.36□□□□□ -0.43
CDRT1-207ENST00000583965 WDR59Q6PJI9 974 aa12.36□□□□□ -0.43
CDRT1-207ENST00000583965 VSTM1Q6UX27 236 aa12.36□□□□□ -0.43
CDRT1-207ENST00000583965 TRIM72Q6ZMU5 477 aa12.36□□□□□ -0.43
CDRT1-207ENST00000583965 RNF19BQ6ZMZ0 732 aa12.36□□□□□ -0.43
CDRT1-207ENST00000583965 RTL10Q7L3V2 364 aa12.36□□□□□ -0.43
CDRT1-207ENST00000583965 CCDC186Q7Z3E2 898 aa12.36□□□□□ -0.43
CDRT1-207ENST00000583965 NOP9Q86U38 636 aaKnown RBP12.36□□□□□ -0.43
CDRT1-207ENST00000583965 FAM35AQ86V20 835 aa12.36□□□□□ -0.43
CDRT1-207ENST00000583965 VPS36Q86VN1 386 aa12.36□□□□□ -0.43
CDRT1-207ENST00000583965 GLYCTKQ8IVS8 523 aa12.36□□□□□ -0.43
CDRT1-207ENST00000583965 FUKQ8N0W3 1084 aa12.36□□□□□ -0.43
CDRT1-207ENST00000583965 ANKRD52Q8NB46 1076 aa12.36□□□□□ -0.43
CDRT1-207ENST00000583965 SLC2A14Q8TDB8 520 aa12.36□□□□□ -0.43
CDRT1-207ENST00000583965 SMARCD1Q96GM5 515 aa12.36□□□□□ -0.43
CDRT1-207ENST00000583965 MED10Q9BTT4 135 aa12.36□□□□□ -0.43
CDRT1-207ENST00000583965 LHX5Q9H2C1 402 aa12.36□□□□□ -0.43
CDRT1-207ENST00000583965 HAUS4Q9H6D7 363 aa12.36□□□□□ -0.43
CDRT1-207ENST00000583965 TMLHEQ9NVH6 421 aa12.36□□□□□ -0.43
CDRT1-207ENST00000583965 DPP7Q9UHL4 492 aa12.36□□□□□ -0.43
CDRT1-207ENST00000583965 TSPAN16Q9UKR8 245 aa12.36□□□□□ -0.43
CDRT1-207ENST00000583965 CEP83Q9Y592 693 aa12.36□□□□□ -0.43
CDRT1-207ENST00000583965 DOCK6Q96HP0 2047 aa12.36□□□□□ -0.43
CDRT1-207ENST00000583965 ANAPC1Q9H1A4 1944 aa12.36□□□□□ -0.43
CDRT1-207ENST00000583965 C2orf16Q68DN1 1984 aa12.36□□□□□ -0.43
CDRT1-207ENST00000583965 SSU72P8A0A1W2PR75 194 aa12.35□□□□□ -0.43
CDRT1-207ENST00000583965 GLUD1P00367 558 aa12.35□□□□□ -0.43
CDRT1-207ENST00000583965 FAM200BP0CF97 657 aa12.35□□□□□ -0.43
CDRT1-207ENST00000583965 SETSIPP0DME0 302 aa12.35□□□□□ -0.43
CDRT1-207ENST00000583965 CCDC130P13994 396 aa12.35□□□□□ -0.43
CDRT1-207ENST00000583965 FECHP22830 423 aa12.35□□□□□ -0.43
CDRT1-207ENST00000583965 ELF1P32519 619 aa12.35□□□□□ -0.43
CDRT1-207ENST00000583965 TUFMP49411 452 aaKnown RBP12.35□□□□□ -0.43
CDRT1-207ENST00000583965 CLCN4P51793 760 aa12.35□□□□□ -0.43
CDRT1-207ENST00000583965 GOLGA8FQ08AF8 430 aa12.35□□□□□ -0.43
CDRT1-207ENST00000583965 GOLGA8DPQ0D2H9 430 aa12.35□□□□□ -0.43
CDRT1-207ENST00000583965 BST2Q10589 180 aaKnown RBP12.35□□□□□ -0.43
CDRT1-207ENST00000583965 MAPK8IP2Q13387 824 aaPredicted RBP12.35□□□□□ -0.43
CDRT1-207ENST00000583965 DUSP6Q16828 381 aa12.35□□□□□ -0.43
CDRT1-207ENST00000583965 GOLGA7BQ2TAP0 167 aa12.35□□□□□ -0.43
CDRT1-207ENST00000583965 TDRD12Q587J7 1177 aaKnown RBP12.35□□□□□ -0.43
CDRT1-207ENST00000583965 LILRA6Q6PI73 481 aa12.35□□□□□ -0.43
CDRT1-207ENST00000583965 ELMSAN1Q6PJG2 1045 aa12.35□□□□□ -0.43
CDRT1-207ENST00000583965 PAQR9Q6ZVX9 377 aa12.35□□□□□ -0.43
CDRT1-207ENST00000583965 ZSCAN30Q86W11 494 aa12.35□□□□□ -0.43
CDRT1-207ENST00000583965 TCEAL8Q8IYN2 117 aa12.35□□□□□ -0.43
CDRT1-207ENST00000583965 HDAC7Q8WUI4 952 aa12.35□□□□□ -0.43
CDRT1-207ENST00000583965 LRCH3Q96II8 777 aa12.35□□□□□ -0.43
CDRT1-207ENST00000583965 CEP295NLQ96MC4 621 aa12.35□□□□□ -0.43
CDRT1-207ENST00000583965 AGPAT1Q99943 283 aa12.35□□□□□ -0.43
CDRT1-207ENST00000583965 LPIN3Q9BQK8 851 aa12.35□□□□□ -0.43
CDRT1-207ENST00000583965 ZSWIM1Q9BR11 485 aa12.35□□□□□ -0.43
CDRT1-207ENST00000583965 SYT11Q9BT88 431 aa12.35□□□□□ -0.43
CDRT1-207ENST00000583965 ZNF518BQ9C0D4 1074 aa12.35□□□□□ -0.43
CDRT1-207ENST00000583965 PDCL3Q9H2J4 239 aa12.35□□□□□ -0.43
CDRT1-207ENST00000583965 PLEKHA4Q9H4M7 779 aa12.35□□□□□ -0.43
CDRT1-207ENST00000583965 PRDM12Q9H4Q4 367 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms