RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 SIDT1Q9NXL6 827 aaKnown RBP5.54□□□□□ -1.52
SS18-223ENST00000583595 LPAR3Q9UBY5 353 aa5.54□□□□□ -1.52
SS18-223ENST00000583595 FBXO10Q9UK96 956 aa5.54□□□□□ -1.52
SS18-223ENST00000583595 SLC45A2Q9UMX9 530 aa5.54□□□□□ -1.52
SS18-223ENST00000583595 TTLL3Q9Y4R7 772 aa5.54□□□□□ -1.52
SS18-223ENST00000583595 ZNF536O15090 1300 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 A0A087X0M5 115 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 A0A0G2JNJ9 132 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 A0A1B0GX30 115 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 RAB27BO00194 218 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 KCNQ3O43525 872 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 DOK2O60496 412 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 B4GALT3O60512 393 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 ALDH1A2O94788 518 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 ACTL6BO94805 426 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 KLHL18O94889 574 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 GJB1P08034 283 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 CKBP12277 381 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 AARSP49588 968 aaKnown RBP eCLIP5.53□□□□□ -1.52
SS18-223ENST00000583595 MAN2A2P49641 1150 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 COPAP53621 1224 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 AP2B1P63010 937 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 UBE3AQ05086 875 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 KIF22Q14807 665 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 MAPKAPK3Q16644 382 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 ZNF827Q17R98 1081 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 TMEM200BQ69YZ2 307 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 KRT28Q7Z3Y7 464 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 TSPYL6Q8N831 410 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 LSMEM1Q8N8F7 131 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 IL17RDQ8NFM7 739 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 RFFLQ8WZ73 363 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 RAPGEF4Q8WZA2 1011 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 MBD6Q96DN6 1003 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 AGXT2Q9BYV1 514 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 C11orf54Q9H0W9 315 aaPredicted RBP5.53□□□□□ -1.52
SS18-223ENST00000583595 SEPSECSQ9HD40 501 aaKnown RBP5.53□□□□□ -1.52
SS18-223ENST00000583595 HELLSQ9NRZ9 838 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 Q9UFV3 132 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 ARHGAP26Q9UNA1 814 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 GPR34Q9UPC5 381 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 RSF1Q96T23 1441 aaPredicted RBP5.53□□□□□ -1.52
SS18-223ENST00000583595 SMARCA2P51531 1590 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 RUSC2Q8N2Y8 1516 aa5.53□□□□□ -1.52
SS18-223ENST00000583595 A0A087WWL8 130 aa5.52□□□□□ -1.53
SS18-223ENST00000583595 TCRBV7S2A1N4TA0A589 114 aa5.52□□□□□ -1.53
SS18-223ENST00000583595 C2orf78A6NCI8 922 aa5.52□□□□□ -1.53
SS18-223ENST00000583595 SYNDIG1LA6NDD5 238 aa5.52□□□□□ -1.53
SS18-223ENST00000583595 MBD3L4A6NDZ8 208 aaPredicted RBP5.52□□□□□ -1.53
SS18-223ENST00000583595 MBD3L3A6NE82 208 aaPredicted RBP5.52□□□□□ -1.53
SS18-223ENST00000583595 ZBED4O75132 1171 aa5.52□□□□□ -1.53
SS18-223ENST00000583595 ALOX15P16050 662 aaPredicted RBP5.52□□□□□ -1.53
SS18-223ENST00000583595 PECAM1P16284 738 aaPredicted RBP5.52□□□□□ -1.53
SS18-223ENST00000583595 NPPBP16860 134 aa5.52□□□□□ -1.53
SS18-223ENST00000583595 PTMSP20962 102 aa5.52□□□□□ -1.53
SS18-223ENST00000583595 CRHR1P34998 444 aa5.52□□□□□ -1.53
SS18-223ENST00000583595 MAGEA10P43363 369 aaPredicted RBP5.52□□□□□ -1.53
SS18-223ENST00000583595 ALDH1A3P47895 512 aa5.52□□□□□ -1.53
SS18-223ENST00000583595 BCAT1P54687 386 aa5.52□□□□□ -1.53
SS18-223ENST00000583595 PSMC1P62191 440 aaKnown RBP5.52□□□□□ -1.53
SS18-223ENST00000583595 CHRNDQ07001 517 aa5.52□□□□□ -1.53
SS18-223ENST00000583595 EFR3AQ14156 821 aa5.52□□□□□ -1.53
SS18-223ENST00000583595 SLC29A2Q14542 456 aa5.52□□□□□ -1.53
SS18-223ENST00000583595 ACAP1Q15027 740 aa5.52□□□□□ -1.53
SS18-223ENST00000583595 PABPC1LQ4VXU2 614 aaKnown RBP5.52□□□□□ -1.53
SS18-223ENST00000583595 PRAMEF14Q5SWL7 426 aa5.52□□□□□ -1.53
SS18-223ENST00000583595 AFMIDQ63HM1 303 aa5.52□□□□□ -1.53
SS18-223ENST00000583595 GATAD2AQ86YP4 633 aa5.52□□□□□ -1.53
SS18-223ENST00000583595 PLXDC1Q8IUK5 500 aa5.52□□□□□ -1.53
SS18-223ENST00000583595 TDRD7Q8NHU6 1098 aaKnown RBP5.52□□□□□ -1.53
SS18-223ENST00000583595 IPCEF1Q8WWN9 437 aaPredicted RBP5.52□□□□□ -1.53
SS18-223ENST00000583595 ST8SIA4Q92187 359 aa5.52□□□□□ -1.53
SS18-223ENST00000583595 TRAPPC9Q96Q05 1148 aa5.52□□□□□ -1.53
SS18-223ENST00000583595 MS4A7Q9GZW8 240 aaPredicted RBP5.52□□□□□ -1.53
SS18-223ENST00000583595 RSPH9Q9H1X1 276 aaPredicted RBP5.52□□□□□ -1.53
SS18-223ENST00000583595 ALDH8A1Q9H2A2 487 aaPredicted RBP5.52□□□□□ -1.53
SS18-223ENST00000583595 PRDM8Q9NQV8 689 aa5.52□□□□□ -1.53
SS18-223ENST00000583595 SMPD4Q9NXE4 827 aa5.52□□□□□ -1.53
SS18-223ENST00000583595 ORC3Q9UBD5 711 aaPredicted RBP5.52□□□□□ -1.53
SS18-223ENST00000583595 SLC23A1Q9UHI7 598 aa5.52□□□□□ -1.53
SS18-223ENST00000583595 MTO1Q9Y2Z2 717 aaKnown RBP5.52□□□□□ -1.53
SS18-223ENST00000583595 ZDHHC9Q9Y397 364 aa5.52□□□□□ -1.53
SS18-223ENST00000583595 HMGXB3Q12766 1538 aa5.52□□□□□ -1.53
SS18-223ENST00000583595 ZMYM3Q14202 1370 aa5.52□□□□□ -1.53
SS18-223ENST00000583595 ATRNL1Q5VV63 1379 aa5.52□□□□□ -1.53
SS18-223ENST00000583595 A0A1W2PRQ8 180 aa5.51□□□□□ -1.53
SS18-223ENST00000583595 PGPEP1LA6NFU8 196 aa5.51□□□□□ -1.53
SS18-223ENST00000583595 MYO1CO00159 1063 aa5.51□□□□□ -1.53
SS18-223ENST00000583595 KIAA0391O15091 583 aaKnown RBP5.51□□□□□ -1.53
SS18-223ENST00000583595 LAMTOR5O43504 91 aa5.51□□□□□ -1.53
SS18-223ENST00000583595 AHCYL1O43865 530 aa5.51□□□□□ -1.53
SS18-223ENST00000583595 PLOD3O60568 738 aa5.51□□□□□ -1.53
SS18-223ENST00000583595 KRT38O76015 456 aa5.51□□□□□ -1.53
SS18-223ENST00000583595 RTN3O95197 1032 aaPredicted RBP5.51□□□□□ -1.53
SS18-223ENST00000583595 GASTP01350 101 aa5.51□□□□□ -1.53
SS18-223ENST00000583595 ANXA1P04083 346 aa5.51□□□□□ -1.53
SS18-223ENST00000583595 PRKCBP05771 671 aa5.51□□□□□ -1.53
SS18-223ENST00000583595 GRPP07492 148 aa5.51□□□□□ -1.53
SS18-223ENST00000583595 GNAI3P08754 354 aa5.51□□□□□ -1.53
SS18-223ENST00000583595 RAP2AP10114 183 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms