RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 CHADO15335 359 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 ASS1P00966 412 aaKnown RBP6.12□□□□□ -1.43
RTTN-209ENST00000583043 ACOT2P49753 483 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 GYS2P54840 703 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 RELL1Q8IUW5 271 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 ARHGEF19Q8IW93 802 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 LRRC52Q8N7C0 313 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 STK32AQ8WU08 396 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 PRPF31Q8WWY3 499 aaKnown RBP6.12□□□□□ -1.43
RTTN-209ENST00000583043 CPA5Q8WXQ8 436 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 NKD2Q969F2 451 aaPredicted RBP6.12□□□□□ -1.43
RTTN-209ENST00000583043 FAM193BQ96PV7 902 aaPredicted RBP6.12□□□□□ -1.43
RTTN-209ENST00000583043 CCDC68Q9H2F9 335 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 CCDC134Q9H6E4 229 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 YY1AP1Q9H869 796 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 RXFP1Q9HBX9 757 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 SIX2Q9NPC8 291 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 A1CFQ9NQ94 594 aaKnown RBP6.12□□□□□ -1.43
RTTN-209ENST00000583043 CISHQ9NSE2 258 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 COMMD10Q9Y6G5 202 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 A0A0B4J269 797 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 RNF225M0QZC1 329 aaPredicted RBP6.12□□□□□ -1.43
RTTN-209ENST00000583043 MAP3K7O43318 606 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 CDK7P50613 346 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 CASP5P51878 434 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 TMPRSS15P98073 1019 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 WASHC2DQ5SRD0 308 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 NAPEPLDQ6IQ20 393 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 EFCAB12Q6NXP0 572 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 ACAD11Q709F0 780 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 PRUNE1Q86TP1 453 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 LRRC6Q86X45 466 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 LZTR1Q8N653 840 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 SEC14L1Q92503 715 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 CCDC126Q96EE4 140 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 NUDCD1Q96RS6 583 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 VPS11Q9H270 941 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 DNAJC18Q9H819 358 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 OSGEPQ9NPF4 335 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 DCDC2Q9UHG0 476 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 MAFBQ9Y5Q3 323 aaPredicted RBP6.12□□□□□ -1.43
RTTN-209ENST00000583043 STYXL1Q9Y6J8 313 aa6.12□□□□□ -1.43
RTTN-209ENST00000583043 ZNF487B1APH4 448 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 CST8O60676 142 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 NOL3O60936 208 aaKnown RBP6.11□□□□□ -1.43
RTTN-209ENST00000583043 GLRA3O75311 464 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 NPTXRO95502 500 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 MYCNP04198 464 aaPredicted RBP6.11□□□□□ -1.43
RTTN-209ENST00000583043 CYP1A1P04798 512 aaPredicted RBP6.11□□□□□ -1.43
RTTN-209ENST00000583043 EN1Q05925 392 aaPredicted RBP6.11□□□□□ -1.43
RTTN-209ENST00000583043 TAF12Q16514 161 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 ECM1Q16610 540 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 SLC35G1Q2M3R5 365 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 LACTB2Q53H82 288 aaPredicted RBP6.11□□□□□ -1.43
RTTN-209ENST00000583043 IQSEC1Q6DN90 963 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 GJB7Q6PEY0 223 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 ZFPM1Q8IX07 1006 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 LRRN4CLQ8ND94 238 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 SPATA18Q8TC71 538 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 DDX50Q9BQ39 737 aaKnown RBP6.11□□□□□ -1.43
RTTN-209ENST00000583043 SPON1Q9HCB6 807 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 ZC3H7BQ9UGR2 993 aaKnown RBP6.11□□□□□ -1.43
RTTN-209ENST00000583043 PRDM4Q9UKN5 801 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 VPS9D1Q9Y2B5 631 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 STARD13Q9Y3M8 1113 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 CDY2AQ9Y6F7 541 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 CDY1Q9Y6F8 540 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 RARAP10276 462 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 FGFR4P22455 802 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 LHX1P48742 406 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 HDAC4P56524 1084 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 NOMO3P69849 1222 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 LAMTOR4Q0VGL1 99 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 BST2Q10589 180 aaKnown RBP6.11□□□□□ -1.43
RTTN-209ENST00000583043 RNF43Q68DV7 783 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 DSTYKQ6XUX3 929 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 NUDCD3Q8IVD9 361 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 TMEM86AQ8N2M4 240 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 PDCD7Q8N8D1 485 aaKnown RBP6.11□□□□□ -1.43
RTTN-209ENST00000583043 NIPA2Q8N8Q9 360 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 REPS2Q8NFH8 660 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 RNF139Q8WU17 664 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 SLC20A1Q8WUM9 679 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 NFKBIZQ9BYH8 718 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 ECT2Q9H8V3 914 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 VCX3AQ9NNX9 186 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 TRHDEQ9UKU6 1024 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 ABCA3Q99758 1704 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 NHSQ6T4R5 1651 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 TYW5A2RUC4 315 aaKnown RBP6.11□□□□□ -1.43
RTTN-209ENST00000583043 GYG2O15488 501 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 NLRP11P59045 1033 aaKnown RBP6.11□□□□□ -1.43
RTTN-209ENST00000583043 RIPK1Q13546 671 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 KYNUQ16719 465 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 MFSD14CQ5VZR4 134 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 TAF2Q6P1X5 1199 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 PLCD3Q8N3E9 789 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 PRELID2Q8N945 189 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 ASAP3Q8TDY4 903 aa6.11□□□□□ -1.43
RTTN-209ENST00000583043 ZNF526Q8TF50 670 aaPredicted RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms