RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 ANHXE9PGG2 379 aa13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 NRG2O14511 850 aaPredicted RBP13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 NARSO43776 548 aaKnown RBP13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 GPR37L1O60883 481 aa13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 MOSPD3O75425 235 aa13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 MICAL2O94851 1124 aa13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 FGF19O95750 216 aa13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 BDNFP23560 247 aa13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 GABRR2P28476 465 aa13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 ASPAP45381 313 aa13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 CFAP221Q4G0U5 840 aa13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 CBWD6Q4V339 395 aa13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 CBWD3Q5JTY5 395 aa13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 CBWD5Q5RIA9 395 aa13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 FOXR2Q6PJQ5 311 aa13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 FRMD5Q7Z6J6 570 aa13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 SLC44A3Q8N4M1 653 aa13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 B3GALNT2Q8NCR0 500 aa13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 STKLD1Q8NE28 680 aa13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 FBXL13Q8NEE6 735 aa13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 SHKBP1Q8TBC3 707 aa13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 MYCBPAPQ8TBZ2 947 aa13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 FGF14Q92915 247 aa13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 PCED1BQ96HM7 432 aa13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 TNIP3Q96KP6 325 aa13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 KXD1Q9BQD3 176 aa13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 LRFN3Q9BTN0 628 aa13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 LRRC3Q9BY71 257 aa13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 NIF3L1Q9GZT8 377 aa13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 ATXN3LQ9H3M9 355 aa13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 APOBEC3GQ9HC16 384 aaKnown RBP13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 RAB20Q9NX57 234 aa13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 MAGED2Q9UNF1 606 aaPredicted RBP13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 DUSP12Q9UNI6 340 aa13.44□□□□□ -0.26
SMARCE1-218ENST00000582955 TMEM221A6NGB7 291 aa13.43□□□□□ -0.26
SMARCE1-218ENST00000582955 PRR33A8MZF0 331 aa13.43□□□□□ -0.26
SMARCE1-218ENST00000582955 M0R296 226 aa13.43□□□□□ -0.26
SMARCE1-218ENST00000582955 LRRN2O75325 713 aa13.43□□□□□ -0.26
SMARCE1-218ENST00000582955 FGFR1OPO95684 399 aaKnown RBP13.43□□□□□ -0.26
SMARCE1-218ENST00000582955 CSH1P0DML2 217 aa13.43□□□□□ -0.26
SMARCE1-218ENST00000582955 CSH2P0DML3 217 aa13.43□□□□□ -0.26
SMARCE1-218ENST00000582955 GRIK1P39086 918 aa13.43□□□□□ -0.26
SMARCE1-218ENST00000582955 NDST1P52848 882 aa13.43□□□□□ -0.26
SMARCE1-218ENST00000582955 MCCD1P59942 119 aaPredicted RBP13.43□□□□□ -0.26
SMARCE1-218ENST00000582955 ORC1Q13415 861 aa13.43□□□□□ -0.26
SMARCE1-218ENST00000582955 ARHGAP15Q53QZ3 475 aa13.43□□□□□ -0.26
SMARCE1-218ENST00000582955 WDR44Q5JSH3 913 aa13.43□□□□□ -0.26
SMARCE1-218ENST00000582955 VSTM1Q6UX27 236 aa13.43□□□□□ -0.26
SMARCE1-218ENST00000582955 MLKLQ8NB16 471 aa13.43□□□□□ -0.26
SMARCE1-218ENST00000582955 GPT2Q8TD30 523 aa13.43□□□□□ -0.26
SMARCE1-218ENST00000582955 SEMA4DQ92854 862 aa13.43□□□□□ -0.26
SMARCE1-218ENST00000582955 SLC35C1Q96A29 364 aa13.43□□□□□ -0.26
SMARCE1-218ENST00000582955 MED10Q9BTT4 135 aa13.43□□□□□ -0.26
SMARCE1-218ENST00000582955 RPP25Q9BUL9 199 aaKnown RBP13.43□□□□□ -0.26
SMARCE1-218ENST00000582955 SRRTQ9BXP5 876 aaKnown RBP13.43□□□□□ -0.26
SMARCE1-218ENST00000582955 RWDD2AQ9UIY3 292 aa13.43□□□□□ -0.26
SMARCE1-218ENST00000582955 SLC38A8A6NNN8 435 aa13.42□□□□□ -0.26
SMARCE1-218ENST00000582955 CLDN5O00501 218 aa13.42□□□□□ -0.26
SMARCE1-218ENST00000582955 GNA14O95837 355 aa13.42□□□□□ -0.26
SMARCE1-218ENST00000582955 CFHP08603 1231 aa13.42□□□□□ -0.26
SMARCE1-218ENST00000582955 CD58P19256 250 aa13.42□□□□□ -0.26
SMARCE1-218ENST00000582955 TRIM21P19474 475 aaKnown RBP13.42□□□□□ -0.26
SMARCE1-218ENST00000582955 ANXA13P27216 316 aa13.42□□□□□ -0.26
SMARCE1-218ENST00000582955 CDC25CP30307 473 aa13.42□□□□□ -0.26
SMARCE1-218ENST00000582955 MAGEA11P43364 429 aa13.42□□□□□ -0.26
SMARCE1-218ENST00000582955 CYP4F8P98187 520 aa13.42□□□□□ -0.26
SMARCE1-218ENST00000582955 FAM78AQ5JUQ0 283 aa13.42□□□□□ -0.26
SMARCE1-218ENST00000582955 STXBP5Q5T5C0 1151 aa13.42□□□□□ -0.26
SMARCE1-218ENST00000582955 GAREM2Q75VX8 874 aa13.42□□□□□ -0.26
SMARCE1-218ENST00000582955 ACOT1Q86TX2 421 aa13.42□□□□□ -0.26
SMARCE1-218ENST00000582955 ZSWIM3Q96MP5 696 aa13.42□□□□□ -0.26
SMARCE1-218ENST00000582955 BCO2Q9BYV7 579 aa13.42□□□□□ -0.26
SMARCE1-218ENST00000582955 ZNF518BQ9C0D4 1074 aa13.42□□□□□ -0.26
SMARCE1-218ENST00000582955 GPR88Q9GZN0 384 aa13.42□□□□□ -0.26
SMARCE1-218ENST00000582955 ELOVL4Q9GZR5 314 aa13.42□□□□□ -0.26
SMARCE1-218ENST00000582955 CYP3A43Q9HB55 503 aa13.42□□□□□ -0.26
SMARCE1-218ENST00000582955 HMGXB4Q9UGU5 601 aa13.42□□□□□ -0.26
SMARCE1-218ENST00000582955 FBXL21Q9UKT6 434 aa13.42□□□□□ -0.26
SMARCE1-218ENST00000582955 ATP8B3O60423 1300 aa13.41□□□□□ -0.26
SMARCE1-218ENST00000582955 TRIM66O15016 1216 aa13.41□□□□□ -0.26
SMARCE1-218ENST00000582955 NOL4O94818 638 aa13.41□□□□□ -0.26
SMARCE1-218ENST00000582955 CCDC192P0DO97 292 aa13.41□□□□□ -0.26
SMARCE1-218ENST00000582955 SRFP11831 508 aa13.41□□□□□ -0.26
SMARCE1-218ENST00000582955 HMGA1P17096 107 aaKnown RBP13.41□□□□□ -0.26
SMARCE1-218ENST00000582955 FMO5P49326 533 aa13.41□□□□□ -0.26
SMARCE1-218ENST00000582955 NLRP12P59046 1061 aa13.41□□□□□ -0.26
SMARCE1-218ENST00000582955 TPD52L1Q16890 204 aaPredicted RBP13.41□□□□□ -0.26
SMARCE1-218ENST00000582955 DPCR1Q3MIW9 517 aa13.41□□□□□ -0.26
SMARCE1-218ENST00000582955 GPR158Q5T848 1215 aa13.41□□□□□ -0.26
SMARCE1-218ENST00000582955 TANGO2Q6ICL3 276 aa13.41□□□□□ -0.26
SMARCE1-218ENST00000582955 HFE2Q6ZVN8 426 aa13.41□□□□□ -0.26
SMARCE1-218ENST00000582955 UNC93AQ86WB7 457 aa13.41□□□□□ -0.26
SMARCE1-218ENST00000582955 CREBRFQ8IUR6 639 aa13.41□□□□□ -0.26
SMARCE1-218ENST00000582955 ZSCAN18Q8TBC5 510 aaPredicted RBP13.41□□□□□ -0.26
SMARCE1-218ENST00000582955 SMARCD2Q92925 531 aa13.41□□□□□ -0.26
SMARCE1-218ENST00000582955 PBXIP1Q96AQ6 731 aa13.41□□□□□ -0.26
SMARCE1-218ENST00000582955 ASIC4Q96FT7 647 aa13.41□□□□□ -0.26
SMARCE1-218ENST00000582955 ASB16Q96NS5 453 aa13.41□□□□□ -0.26
SMARCE1-218ENST00000582955 B3GNT5Q9BYG0 378 aa13.41□□□□□ -0.26
SMARCE1-218ENST00000582955 DNAI2Q9GZS0 605 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms