RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 GTF3C4Q9UKN8 822 aa12.73□□□□□ -0.37
CCDC57-216ENST00000582885 TSPAN16Q9UKR8 245 aa12.73□□□□□ -0.37
CCDC57-216ENST00000582885 REXO2Q9Y3B8 237 aaKnown RBP12.73□□□□□ -0.37
CCDC57-216ENST00000582885 PCDHA13Q9Y5I0 950 aa12.73□□□□□ -0.37
CCDC57-216ENST00000582885 MYO16Q9Y6X6 1858 aa12.73□□□□□ -0.37
CCDC57-216ENST00000582885 GRXCR1A8MXD5 290 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 PJA2O43164 708 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 ZSCAN12O43309 604 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 CFHP08603 1231 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 CTSAP10619 480 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 CTNNB1P35222 781 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 GPD2P43304 727 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 VAV2P52735 878 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 BCAT1P54687 386 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 ERVK-21P61565 698 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 PSMC1P62191 440 aaKnown RBP12.72□□□□□ -0.37
CCDC57-216ENST00000582885 CYP27A1Q02318 531 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 CREMQ03060 361 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 GPR17Q13304 367 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 PSMD5Q16401 504 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 MDH1BQ5I0G3 518 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 SLC8B1Q6J4K2 584 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 KIAA1841Q6NSI8 718 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 DENND1BQ6P3S1 775 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 C4orf50Q6ZRC1 276 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 PAQR9Q6ZVX9 377 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 LRRTM3Q86VH5 581 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 ZSCAN30Q86W11 494 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 PHF13Q86YI8 300 aaPredicted RBP12.72□□□□□ -0.37
CCDC57-216ENST00000582885 TDHQ8IZJ6 230 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 VPS52Q8N1B4 723 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 WDTC1Q8N5D0 677 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 ACRBPQ8NEB7 543 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 SLC2A14Q8TDB8 520 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 C2orf15Q8WU43 125 aaKnown RBP12.72□□□□□ -0.37
CCDC57-216ENST00000582885 RIN2Q8WYP3 895 aaPredicted RBP12.72□□□□□ -0.37
CCDC57-216ENST00000582885 PCED1BQ96HM7 432 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 FUBP3Q96I24 572 aaKnown RBP eCLIP12.72□□□□□ -0.37
CCDC57-216ENST00000582885 DUSP16Q9BY84 665 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 B3GNT5Q9BYG0 378 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 UBXN6Q9BZV1 441 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 CYLDQ9NQC7 956 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.72□□□□□ -0.37
CCDC57-216ENST00000582885 SEPT11Q9NVA2 429 aaKnown RBP12.72□□□□□ -0.37
CCDC57-216ENST00000582885 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.72□□□□□ -0.37
CCDC57-216ENST00000582885 FNIP2Q9P278 1114 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 PPP2R2CQ9Y2T4 447 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 TRANK1O15050 2925 aa12.72□□□□□ -0.37
CCDC57-216ENST00000582885 MYO9BQ13459 2157 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 CHD9Q3L8U1 2897 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 DENND4CQ5VZ89 1909 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 ANKRD62A6NC57 917 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 GOLGA6L9A6NEM1 432 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 M0QYV0 167 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 LILRB3O75022 631 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 FTLP02792 175 aaPredicted RBP12.71□□□□□ -0.37
CCDC57-216ENST00000582885 URODP06132 367 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 CA3P07451 260 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 H2AFZP0C0S5 128 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 CCDC130P13994 396 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 MYOGP15173 224 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 MMP8P22894 467 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 NSFP46459 744 aaKnown RBP12.71□□□□□ -0.37
CCDC57-216ENST00000582885 RPL34P49207 117 aaKnown RBP12.71□□□□□ -0.37
CCDC57-216ENST00000582885 SLC8A3P57103 927 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 TAP1Q03518 808 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 C1QBPQ07021 282 aaKnown RBP12.71□□□□□ -0.37
CCDC57-216ENST00000582885 BST2Q10589 180 aaKnown RBP12.71□□□□□ -0.37
CCDC57-216ENST00000582885 GOLGA7BQ2TAP0 167 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 CFAP221Q4G0U5 840 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 H2AFVQ71UI9 128 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 TTC30AQ86WT1 665 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 CCAR2Q8N163 923 aaKnown RBP12.71□□□□□ -0.37
CCDC57-216ENST00000582885 MSANTD4Q8NCY6 345 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 FBXO22Q8NEZ5 403 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 SLC35F5Q8WV83 523 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 TRIM11Q96F44 468 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 SMARCD1Q96GM5 515 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 B3GALT6Q96L58 329 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 NOX5Q96PH1 765 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 TGS1Q96RS0 853 aaKnown RBP12.71□□□□□ -0.37
CCDC57-216ENST00000582885 LPIN3Q9BQK8 851 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 DESI2Q9BSY9 194 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 C11orf84Q9BUA3 381 aaPredicted RBP12.71□□□□□ -0.37
CCDC57-216ENST00000582885 ZBP1Q9H171 429 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 PRO3102Q9H379 93 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 RXFP1Q9HBX9 757 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 CSNK1G1Q9HCP0 422 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 ABCB6Q9NP58 842 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 MRPL17Q9NRX2 175 aaKnown RBP12.71□□□□□ -0.37
CCDC57-216ENST00000582885 MSRAQ9UJ68 235 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 MAFFQ9ULX9 164 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 IRAK3Q9Y616 596 aa12.71□□□□□ -0.37
CCDC57-216ENST00000582885 COL4A4P53420 1690 aaPredicted RBP12.7□□□□□ -0.38
CCDC57-216ENST00000582885 BTNL10A8MVZ5 291 aa12.7□□□□□ -0.38
CCDC57-216ENST00000582885 TMEM253P0C7T8 217 aa12.7□□□□□ -0.38
CCDC57-216ENST00000582885 FAM200BP0CF97 657 aa12.7□□□□□ -0.38
CCDC57-216ENST00000582885 MYBL1P10243 752 aa12.7□□□□□ -0.38
CCDC57-216ENST00000582885 NPR3P17342 541 aa12.7□□□□□ -0.38
CCDC57-216ENST00000582885 ADORA2BP29275 332 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms