RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 MAGED2Q9UNF1 606 aaPredicted RBP14.6□□□□□ -0.07
SS18-222ENST00000582792 STX6O43752 255 aa14.59□□□□□ -0.07
SS18-222ENST00000582792 IL18RAPO95256 599 aa14.59□□□□□ -0.07
SS18-222ENST00000582792 APBB3O95704 486 aa14.59□□□□□ -0.07
SS18-222ENST00000582792 PNPLA4P41247 253 aa14.59□□□□□ -0.07
SS18-222ENST00000582792 FAM160A1Q05DH4 1040 aa14.59□□□□□ -0.07
SS18-222ENST00000582792 ELF2Q15723 593 aa14.59□□□□□ -0.07
SS18-222ENST00000582792 SDHAF4Q5VUM1 108 aa14.59□□□□□ -0.07
SS18-222ENST00000582792 TCEAL6Q6IPX3 200 aa14.59□□□□□ -0.07
SS18-222ENST00000582792 BRAPQ7Z569 592 aa14.59□□□□□ -0.07
SS18-222ENST00000582792 NT5DC4Q86YG4 428 aa14.59□□□□□ -0.07
SS18-222ENST00000582792 OSCP1Q8WVF1 389 aa14.59□□□□□ -0.07
SS18-222ENST00000582792 EZH1Q92800 747 aaPredicted RBP14.59□□□□□ -0.07
SS18-222ENST00000582792 TCEAL3Q969E4 200 aa14.59□□□□□ -0.07
SS18-222ENST00000582792 TRMT2BQ96GJ1 504 aaKnown RBP14.59□□□□□ -0.07
SS18-222ENST00000582792 MYRFLQ96LU7 910 aa14.59□□□□□ -0.07
SS18-222ENST00000582792 TMEM206Q9H813 350 aa14.59□□□□□ -0.07
SS18-222ENST00000582792 ECT2Q9H8V3 914 aa14.59□□□□□ -0.07
SS18-222ENST00000582792 ABCB6Q9NP58 842 aa14.59□□□□□ -0.07
SS18-222ENST00000582792 UXTQ9UBK9 157 aaPredicted RBP14.59□□□□□ -0.07
SS18-222ENST00000582792 EBF1Q9UH73 591 aa14.59□□□□□ -0.07
SS18-222ENST00000582792 KIAA1549LQ6ZVL6 1849 aa14.59□□□□□ -0.07
SS18-222ENST00000582792 SPEGQ15772 3267 aa14.58□□□□□ -0.07
SS18-222ENST00000582792 NOL4O94818 638 aa14.58□□□□□ -0.08
SS18-222ENST00000582792 RHOBTB1O94844 696 aa14.58□□□□□ -0.08
SS18-222ENST00000582792 ADSSP30520 456 aa14.58□□□□□ -0.08
SS18-222ENST00000582792 RPL10AP62906 217 aaKnown RBP14.58□□□□□ -0.08
SS18-222ENST00000582792 USP4Q13107 963 aa14.58□□□□□ -0.08
SS18-222ENST00000582792 DMC1Q14565 340 aa14.58□□□□□ -0.08
SS18-222ENST00000582792 ZNF77Q15935 545 aa14.58□□□□□ -0.08
SS18-222ENST00000582792 DDR2Q16832 855 aa14.58□□□□□ -0.08
SS18-222ENST00000582792 PSAPL1Q6NUJ1 521 aa14.58□□□□□ -0.08
SS18-222ENST00000582792 PDCL2Q8N4E4 241 aa14.58□□□□□ -0.08
SS18-222ENST00000582792 POMGNT1Q8WZA1 660 aa14.58□□□□□ -0.08
SS18-222ENST00000582792 LARP4BQ92615 738 aaKnown RBP14.58□□□□□ -0.08
SS18-222ENST00000582792 CD101Q93033 1021 aa14.58□□□□□ -0.08
SS18-222ENST00000582792 ATP2A3Q93084 1043 aa14.58□□□□□ -0.08
SS18-222ENST00000582792 ACDQ96AP0 544 aa14.58□□□□□ -0.08
SS18-222ENST00000582792 HVCN1Q96D96 273 aa14.58□□□□□ -0.08
SS18-222ENST00000582792 ACBD6Q9BR61 282 aa14.58□□□□□ -0.08
SS18-222ENST00000582792 EDEM2Q9BV94 578 aa14.58□□□□□ -0.08
SS18-222ENST00000582792 IKZF4Q9H2S9 585 aa14.58□□□□□ -0.08
SS18-222ENST00000582792 ZSCAN16Q9H4T2 348 aaPredicted RBP14.58□□□□□ -0.08
SS18-222ENST00000582792 FOXD4L1Q9NU39 408 aa14.58□□□□□ -0.08
SS18-222ENST00000582792 DUS2Q9NX74 493 aaKnown RBP14.58□□□□□ -0.08
SS18-222ENST00000582792 L1RE1Q9UN81 338 aa14.58□□□□□ -0.08
SS18-222ENST00000582792 MTMR6Q9Y217 621 aa14.58□□□□□ -0.08
SS18-222ENST00000582792 MYO16Q9Y6X6 1858 aa14.58□□□□□ -0.08
SS18-222ENST00000582792 BCLAF3A2AJT9 711 aaKnown RBP14.57□□□□□ -0.08
SS18-222ENST00000582792 DCLK1O15075 740 aa14.57□□□□□ -0.08
SS18-222ENST00000582792 CKMP06732 381 aa14.57□□□□□ -0.08
SS18-222ENST00000582792 USP17L7P0C7H9 530 aa14.57□□□□□ -0.08
SS18-222ENST00000582792 CYP2F1P24903 491 aa14.57□□□□□ -0.08
SS18-222ENST00000582792 POLR2BP30876 1174 aaKnown RBP14.57□□□□□ -0.08
SS18-222ENST00000582792 LONP1P36776 959 aaKnown RBP14.57□□□□□ -0.08
SS18-222ENST00000582792 IFNAR2P48551 515 aa14.57□□□□□ -0.08
SS18-222ENST00000582792 CREB5Q02930 508 aa14.57□□□□□ -0.08
SS18-222ENST00000582792 POSTNQ15063 836 aa14.57□□□□□ -0.08
SS18-222ENST00000582792 EML3Q32P44 896 aa14.57□□□□□ -0.08
SS18-222ENST00000582792 INTS6LQ5JSJ4 861 aaKnown RBP14.57□□□□□ -0.08
SS18-222ENST00000582792 ZNF720Q7Z2F6 126 aa14.57□□□□□ -0.08
SS18-222ENST00000582792 C1orf127Q8N9H9 656 aa14.57□□□□□ -0.08
SS18-222ENST00000582792 RASSF8Q8NHQ8 419 aa14.57□□□□□ -0.08
SS18-222ENST00000582792 SLC22A12Q96S37 553 aa14.57□□□□□ -0.08
SS18-222ENST00000582792 CYP2S1Q96SQ9 504 aa14.57□□□□□ -0.08
SS18-222ENST00000582792 PKMYT1Q99640 499 aa14.57□□□□□ -0.08
SS18-222ENST00000582792 TRPC7Q9HCX4 862 aa14.57□□□□□ -0.08
SS18-222ENST00000582792 DDX43Q9NXZ2 648 aaKnown RBP14.57□□□□□ -0.08
SS18-222ENST00000582792 WNT6Q9Y6F9 365 aa14.57□□□□□ -0.08
SS18-222ENST00000582792 TRAV19A0A0A6YYK7 116 aa14.56□□□□□ -0.08
SS18-222ENST00000582792 VPS37CA5D8V6 355 aaPredicted RBP14.56□□□□□ -0.08
SS18-222ENST00000582792 HUS1O60921 280 aa14.56□□□□□ -0.08
SS18-222ENST00000582792 PPP1R37O75864 691 aa14.56□□□□□ -0.08
SS18-222ENST00000582792 CAVIN2O95810 425 aa14.56□□□□□ -0.08
SS18-222ENST00000582792 ITGB3P05106 788 aa14.56□□□□□ -0.08
SS18-222ENST00000582792 PROS1P07225 676 aa14.56□□□□□ -0.08
SS18-222ENST00000582792 ACAT1P24752 427 aaKnown RBP14.56□□□□□ -0.08
SS18-222ENST00000582792 DDIT3P35638 169 aa14.56□□□□□ -0.08
SS18-222ENST00000582792 ANP32AP39687 249 aaKnown RBP14.56□□□□□ -0.08
SS18-222ENST00000582792 WNT7BP56706 349 aa14.56□□□□□ -0.08
SS18-222ENST00000582792 MYL7Q01449 175 aa14.56□□□□□ -0.08
SS18-222ENST00000582792 GRIN1Q05586 938 aa14.56□□□□□ -0.08
SS18-222ENST00000582792 SFR1Q86XK3 245 aa14.56□□□□□ -0.08
SS18-222ENST00000582792 TMEM86AQ8N2M4 240 aa14.56□□□□□ -0.08
SS18-222ENST00000582792 LRRC52Q8N7C0 313 aa14.56□□□□□ -0.08
SS18-222ENST00000582792 KRI1Q8N9T8 703 aaKnown RBP14.56□□□□□ -0.08
SS18-222ENST00000582792 STRA6Q9BX79 667 aa14.56□□□□□ -0.08
SS18-222ENST00000582792 GTF3C4Q9UKN8 822 aa14.56□□□□□ -0.08
SS18-222ENST00000582792 AGAP1Q9UPQ3 857 aa14.56□□□□□ -0.08
SS18-222ENST00000582792 ASPMQ8IZT6 3477 aa14.56□□□□□ -0.08
SS18-222ENST00000582792 ANAPC1Q9H1A4 1944 aa14.55□□□□□ -0.08
SS18-222ENST00000582792 AKAP13Q12802 2813 aa14.55□□□□□ -0.08
SS18-222ENST00000582792 C4orf47A7E2U8 309 aa14.55□□□□□ -0.08
SS18-222ENST00000582792 BMP15O95972 392 aa14.55□□□□□ -0.08
SS18-222ENST00000582792 TCF3P15923 654 aa14.55□□□□□ -0.08
SS18-222ENST00000582792 NOVA1P51513 510 aaKnown RBP14.55□□□□□ -0.08
SS18-222ENST00000582792 DGKEP52429 567 aa14.55□□□□□ -0.08
SS18-222ENST00000582792 TFAMQ00059 246 aaKnown RBP14.55□□□□□ -0.08
SS18-222ENST00000582792 RESTQ13127 1097 aa14.55□□□□□ -0.08
SS18-222ENST00000582792 NR1H3Q13133 447 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms