RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	12.48	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	FSTL4	Q6MZW2	842 aa		12.48	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	CC2D1A	Q6P1N0	951 aa	Predicted RBP	12.48	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	FOXD4L3	Q6VB84	417 aa	Predicted RBP	12.48	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	CEP68	Q76N32	757 aa		12.48	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	LONP2	Q86WA8	852 aa		12.48	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	SPATA2L	Q8IUW3	424 aa	Predicted RBP	12.48	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	TMEM86A	Q8N2M4	240 aa		12.48	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	LRRC52	Q8N7C0	313 aa		12.48	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	RDH13	Q8NBN7	331 aa		12.48	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	LEO1	Q8WVC0	666 aa	Predicted RBP	12.48	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	DHX58	Q96C10	678 aa		12.48	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	CHFR	Q96EP1	664 aa		12.48	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	ANKRD36BP1	Q96IX9	119 aa		12.48	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	SLC22A12	Q96S37	553 aa		12.48	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	CYP2S1	Q96SQ9	504 aa		12.48	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	PKMYT1	Q99640	499 aa		12.48	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	FAM83C	Q9BQN1	747 aa		12.48	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	TMEM206	Q9H813	350 aa		12.48	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	TFIP11	Q9UBB9	837 aa	Known RBP	12.48	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	R3HCC1	Q9Y3T6	440 aa	Known RBP	12.48	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	ATG2B	Q96BY7	2078 aa		12.48	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	12.47	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	PRR5-ARHGAP8	B1AHC4	643 aa		12.47	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	NOL4	O94818	638 aa		12.47	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	EGF	P01133	1207 aa		12.47	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	TNNC2	P02585	160 aa		12.47	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	RET	P07949	1114 aa		12.47	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	PDGFRB	P09619	1106 aa		12.47	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	LMO2	P25791	158 aa		12.47	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	DDX6	P26196	483 aa	Known RBP eCLIP	12.47	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	RPL10A	P62906	217 aa	Known RBP	12.47	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	ASIC1	P78348	528 aa		12.47	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	ARHGAP8	P85298	464 aa		12.47	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	GRSF1	Q12849	480 aa	Known RBP eCLIP	12.47	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	CCDC6	Q16204	474 aa		12.47	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	MON1A	Q86VX9	555 aa		12.47	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	TOP6BL	Q8N6T0	577 aa		12.47	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	ARL14EP	Q8N8R7	260 aa	Predicted RBP	12.47	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	HPDL	Q96IR7	371 aa		12.47	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	SYT15	Q9BQS2	421 aa		12.47	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	FBRSL1	Q9HCM7	1045 aa	Known RBP	12.47	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	INTS13	Q9NVM9	706 aa		12.47	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	GDAP2	Q9NXN4	497 aa		12.47	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	HSPBP1	Q9NZL4	362 aa		12.47	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	WNT6	Q9Y6F9	365 aa		12.47	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	12.46	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	C2orf78	A6NCI8	922 aa		12.46	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	ZNF233	A6NK53	670 aa		12.46	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	SPTLC2	O15270	562 aa		12.46	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	GDF9	O60383	454 aa		12.46	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	RNF40	O75150	1001 aa		12.46	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	PAPSS2	O95340	614 aa	Predicted RBP	12.46	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	CKM	P06732	381 aa		12.46	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	KCNA4	P22459	653 aa		12.46	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	BDNF	P23560	247 aa		12.46	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	PCSK1	P29120	753 aa		12.46	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	CASP1	P29466	404 aa		12.46	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	HOXD13	P35453	343 aa		12.46	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	LHX1	P48742	406 aa		12.46	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	NASP	P49321	788 aa	Predicted RBP	12.46	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	MYO1E	Q12965	1108 aa		12.46	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	MTF1	Q14872	753 aa		12.46	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	TMEM196	Q5HYL7	178 aa		12.46	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	STXBP4	Q6ZWJ1	553 aa		12.46	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	NELFCD	Q8IXH7	590 aa		12.46	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	FAM160A2	Q8N612	972 aa	Predicted RBP	12.46	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	LINC00301	Q8NCQ3	95 aa		12.46	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	KBTBD7	Q8WVZ9	684 aa		12.46	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	MYLPF	Q96A32	169 aa		12.46	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	INTS4	Q96HW7	963 aa	Known RBP	12.46	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	MMS19	Q96T76	1030 aa		12.46	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	TNMD	Q9H2S6	317 aa		12.46	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	12.46	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	KIF9	Q9HAQ2	790 aa		12.46	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	ABCB6	Q9NP58	842 aa		12.46	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	SEMA4G	Q9NTN9	838 aa		12.46	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	DUS2	Q9NX74	493 aa	Known RBP	12.46	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	UXT	Q9UBK9	157 aa	Predicted RBP	12.46	□□□□□ -0.41
CDK5RAP3-223	ENST00000582114	TRAV19	A0A0A6YYK7	116 aa		12.45	□□□□□ -0.42
CDK5RAP3-223	ENST00000582114		K7ELQ4	463 aa	Predicted RBP	12.45	□□□□□ -0.42
CDK5RAP3-223	ENST00000582114	GABRD	O14764	452 aa		12.45	□□□□□ -0.42
CDK5RAP3-223	ENST00000582114	AXIN1	O15169	862 aa		12.45	□□□□□ -0.42
CDK5RAP3-223	ENST00000582114	CLIC2	O15247	247 aa		12.45	□□□□□ -0.42
CDK5RAP3-223	ENST00000582114	DLAT	P10515	647 aa	Known RBP	12.45	□□□□□ -0.42
CDK5RAP3-223	ENST00000582114	SDHB	P21912	280 aa		12.45	□□□□□ -0.42
CDK5RAP3-223	ENST00000582114	IFNAR2	P48551	515 aa		12.45	□□□□□ -0.42
CDK5RAP3-223	ENST00000582114	GALK1	P51570	392 aa		12.45	□□□□□ -0.42
CDK5RAP3-223	ENST00000582114	CYP2J2	P51589	502 aa		12.45	□□□□□ -0.42
CDK5RAP3-223	ENST00000582114	CYP27A1	Q02318	531 aa		12.45	□□□□□ -0.42
CDK5RAP3-223	ENST00000582114	ZNF77	Q15935	545 aa		12.45	□□□□□ -0.42
CDK5RAP3-223	ENST00000582114	E2F4	Q16254	413 aa		12.45	□□□□□ -0.42
CDK5RAP3-223	ENST00000582114	DUOXA2	Q1HG44	320 aa		12.45	□□□□□ -0.42
CDK5RAP3-223	ENST00000582114	PRR23C	Q6ZRP0	262 aa		12.45	□□□□□ -0.42
CDK5RAP3-223	ENST00000582114	WDR5B	Q86VZ2	330 aa		12.45	□□□□□ -0.42
CDK5RAP3-223	ENST00000582114	SYNPO	Q8N3V7	929 aa		12.45	□□□□□ -0.42
CDK5RAP3-223	ENST00000582114	TRMT2B	Q96GJ1	504 aa	Known RBP	12.45	□□□□□ -0.42
CDK5RAP3-223	ENST00000582114	HHIP	Q96QV1	700 aa		12.45	□□□□□ -0.42
CDK5RAP3-223	ENST00000582114	TRIM9	Q9C026	710 aa		12.45	□□□□□ -0.42
CDK5RAP3-223	ENST00000582114	CRTAC1	Q9NQ79	661 aa		12.45	□□□□□ -0.42

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