RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 PGBD4Q96DM1 585 aa13.37□□□□□ -0.27
SRSF1-204ENST00000581979 SMYD3Q9H7B4 428 aa13.37□□□□□ -0.27
SRSF1-204ENST00000581979 CYP3A43Q9HB55 503 aa13.37□□□□□ -0.27
SRSF1-204ENST00000581979 C11orf16Q9NQ32 467 aa13.37□□□□□ -0.27
SRSF1-204ENST00000581979 SALL4Q9UJQ4 1053 aa13.37□□□□□ -0.27
SRSF1-204ENST00000581979 CAPN6Q9Y6Q1 641 aa13.37□□□□□ -0.27
SRSF1-204ENST00000581979 ANKRD62A6NC57 917 aa13.36□□□□□ -0.27
SRSF1-204ENST00000581979 MEIS3P2A8K0S8 358 aa13.36□□□□□ -0.27
SRSF1-204ENST00000581979 RIOK3O14730 519 aaKnown RBP13.36□□□□□ -0.27
SRSF1-204ENST00000581979 PPEF2O14830 753 aa13.36□□□□□ -0.27
SRSF1-204ENST00000581979 FTLP02792 175 aaPredicted RBP13.36□□□□□ -0.27
SRSF1-204ENST00000581979 GZMAP12544 262 aa13.36□□□□□ -0.27
SRSF1-204ENST00000581979 CYP3A5P20815 502 aa13.36□□□□□ -0.27
SRSF1-204ENST00000581979 MLH1P40692 756 aa13.36□□□□□ -0.27
SRSF1-204ENST00000581979 NOP2P46087 812 aaKnown RBP13.36□□□□□ -0.27
SRSF1-204ENST00000581979 ZNF132P52740 706 aa13.36□□□□□ -0.27
SRSF1-204ENST00000581979 CDH8P55286 799 aa13.36□□□□□ -0.27
SRSF1-204ENST00000581979 IFI16Q16666 785 aaKnown RBP13.36□□□□□ -0.27
SRSF1-204ENST00000581979 NOMO2Q5JPE7 1267 aa13.36□□□□□ -0.27
SRSF1-204ENST00000581979 TMEM31Q5JXX7 168 aa13.36□□□□□ -0.27
SRSF1-204ENST00000581979 PLPP4Q5VZY2 271 aa13.36□□□□□ -0.27
SRSF1-204ENST00000581979 ZNF560Q96MR9 790 aa13.36□□□□□ -0.27
SRSF1-204ENST00000581979 MMS19Q96T76 1030 aa13.36□□□□□ -0.27
SRSF1-204ENST00000581979 LRFN3Q9BTN0 628 aa13.36□□□□□ -0.27
SRSF1-204ENST00000581979 ISCUQ9H1K1 167 aa13.36□□□□□ -0.27
SRSF1-204ENST00000581979 ENTPD7Q9NQZ7 604 aa13.36□□□□□ -0.27
SRSF1-204ENST00000581979 TBC1D13Q9NVG8 400 aa13.36□□□□□ -0.27
SRSF1-204ENST00000581979 BARX2Q9UMQ3 279 aaPredicted RBP13.36□□□□□ -0.27
SRSF1-204ENST00000581979 GIT1Q9Y2X7 761 aa13.36□□□□□ -0.27
SRSF1-204ENST00000581979 HIDE1A8MVS5 230 aa13.36□□□□□ -0.27
SRSF1-204ENST00000581979 ALADP13716 330 aa13.36□□□□□ -0.27
SRSF1-204ENST00000581979 CLEC16AQ2KHT3 1053 aa13.36□□□□□ -0.27
SRSF1-204ENST00000581979 ACAD10Q6JQN1 1059 aa13.36□□□□□ -0.27
SRSF1-204ENST00000581979 AGMOQ6ZNB7 445 aa13.36□□□□□ -0.27
SRSF1-204ENST00000581979 MRPL43Q8N983 215 aaKnown RBP13.36□□□□□ -0.27
SRSF1-204ENST00000581979 ZFP42Q96MM3 310 aa13.36□□□□□ -0.27
SRSF1-204ENST00000581979 GAD1Q99259 594 aa13.36□□□□□ -0.27
SRSF1-204ENST00000581979 THAP2Q9H0W7 228 aa13.36□□□□□ -0.27
SRSF1-204ENST00000581979 SDCBP2Q9H190 292 aa13.36□□□□□ -0.27
SRSF1-204ENST00000581979 NRDE2Q9H7Z3 1164 aa13.36□□□□□ -0.27
SRSF1-204ENST00000581979 SLC38A7Q9NVC3 462 aa13.36□□□□□ -0.27
SRSF1-204ENST00000581979 SNX9Q9Y5X1 595 aa13.36□□□□□ -0.27
SRSF1-204ENST00000581979 SCN1AP35498 2009 aa13.35□□□□□ -0.27
SRSF1-204ENST00000581979 NCANO14594 1321 aa13.35□□□□□ -0.27
SRSF1-204ENST00000581979 A0A0A6YYK5 440 aaPredicted RBP13.35□□□□□ -0.27
SRSF1-204ENST00000581979 ANO9A1A5B4 782 aa13.35□□□□□ -0.27
SRSF1-204ENST00000581979 PIRO00625 290 aa13.35□□□□□ -0.27
SRSF1-204ENST00000581979 PTGESO14684 152 aa13.35□□□□□ -0.27
SRSF1-204ENST00000581979 GALTP07902 379 aa13.35□□□□□ -0.27
SRSF1-204ENST00000581979 PNPLA4P41247 253 aa13.35□□□□□ -0.27
SRSF1-204ENST00000581979 RBM10P98175 930 aaKnown RBP13.35□□□□□ -0.27
SRSF1-204ENST00000581979 SOX4Q06945 474 aaPredicted RBP13.35□□□□□ -0.27
SRSF1-204ENST00000581979 SMC1AQ14683 1233 aaKnown RBP13.35□□□□□ -0.27
SRSF1-204ENST00000581979 TRIM72Q6ZMU5 477 aa13.35□□□□□ -0.27
SRSF1-204ENST00000581979 TMC7Q7Z402 723 aa13.35□□□□□ -0.27
SRSF1-204ENST00000581979 TTC39CQ8N584 583 aa13.35□□□□□ -0.27
SRSF1-204ENST00000581979 ZNF606Q8WXB4 792 aa13.35□□□□□ -0.27
SRSF1-204ENST00000581979 TMEM169Q96HH4 297 aa13.35□□□□□ -0.27
SRSF1-204ENST00000581979 PPP1R10Q96QC0 940 aaKnown RBP13.35□□□□□ -0.27
SRSF1-204ENST00000581979 RSAD1Q9HA92 442 aa13.35□□□□□ -0.27
SRSF1-204ENST00000581979 GOLGA2P5Q9HBQ8 144 aa13.35□□□□□ -0.27
SRSF1-204ENST00000581979 NT5C1B-RDH14C9J2C7 533 aa13.34□□□□□ -0.27
SRSF1-204ENST00000581979 ENC1O14682 589 aa13.34□□□□□ -0.27
SRSF1-204ENST00000581979 PALMO75781 387 aa13.34□□□□□ -0.27
SRSF1-204ENST00000581979 THP07101 528 aa13.34□□□□□ -0.27
SRSF1-204ENST00000581979 CD19P15391 556 aa13.34□□□□□ -0.27
SRSF1-204ENST00000581979 BRD2P25440 801 aaKnown RBP13.34□□□□□ -0.27
SRSF1-204ENST00000581979 TAF6P49848 677 aa13.34□□□□□ -0.27
SRSF1-204ENST00000581979 GPC5P78333 572 aa13.34□□□□□ -0.27
SRSF1-204ENST00000581979 SV2CQ496J9 727 aa13.34□□□□□ -0.27
SRSF1-204ENST00000581979 TMEM173Q86WV6 379 aaPredicted RBP13.34□□□□□ -0.27
SRSF1-204ENST00000581979 PASD1Q8IV76 773 aa13.34□□□□□ -0.27
SRSF1-204ENST00000581979 RFFLQ8WZ73 363 aa13.34□□□□□ -0.27
SRSF1-204ENST00000581979 SUSD6Q92537 303 aa13.34□□□□□ -0.27
SRSF1-204ENST00000581979 IGSF21Q96ID5 467 aa13.34□□□□□ -0.27
SRSF1-204ENST00000581979 FAM124BQ9H5Z6 455 aaPredicted RBP13.34□□□□□ -0.27
SRSF1-204ENST00000581979 UBN1Q9NPG3 1134 aa13.34□□□□□ -0.27
SRSF1-204ENST00000581979 KANSL3Q9P2N6 904 aa13.34□□□□□ -0.27
SRSF1-204ENST00000581979 INPP5FQ9Y2H2 1132 aa13.34□□□□□ -0.27
SRSF1-204ENST00000581979 USP15Q9Y4E8 981 aaPredicted RBP13.34□□□□□ -0.27
SRSF1-204ENST00000581979 IRAK3Q9Y616 596 aa13.34□□□□□ -0.27
SRSF1-204ENST00000581979 TDRD15B5MCY1 1934 aaKnown RBP13.34□□□□□ -0.27
SRSF1-204ENST00000581979 MYH10P35580 1976 aa13.34□□□□□ -0.27
SRSF1-204ENST00000581979 C2orf71A6NGG8 1288 aa13.33□□□□□ -0.27
SRSF1-204ENST00000581979 ARL5CA6NH57 179 aa13.33□□□□□ -0.27
SRSF1-204ENST00000581979 INPPL1O15357 1258 aa13.33□□□□□ -0.27
SRSF1-204ENST00000581979 MED7O43513 233 aa13.33□□□□□ -0.27
SRSF1-204ENST00000581979 DCXO43602 365 aa13.33□□□□□ -0.27
SRSF1-204ENST00000581979 CILPO75339 1184 aa13.33□□□□□ -0.27
SRSF1-204ENST00000581979 CYP1A1P04798 512 aaPredicted RBP13.33□□□□□ -0.27
SRSF1-204ENST00000581979 ATP1A1P05023 1023 aaKnown RBP13.33□□□□□ -0.27
SRSF1-204ENST00000581979 PAEPP09466 180 aa13.33□□□□□ -0.27
SRSF1-204ENST00000581979 SRGAP2BP0DMP2 458 aa13.33□□□□□ -0.27
SRSF1-204ENST00000581979 UNGP13051 313 aaPredicted RBP13.33□□□□□ -0.27
SRSF1-204ENST00000581979 LRPAP1P30533 357 aa13.33□□□□□ -0.27
SRSF1-204ENST00000581979 NSFP46459 744 aaKnown RBP13.33□□□□□ -0.27
SRSF1-204ENST00000581979 SCNN1GP51170 649 aa13.33□□□□□ -0.27
SRSF1-204ENST00000581979 RAD23BP54727 409 aa13.33□□□□□ -0.27
SRSF1-204ENST00000581979 RNASELQ05823 741 aaKnown RBP13.33□□□□□ -0.27
SRSF1-204ENST00000581979 NAA35Q5VZE5 725 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms