RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 SP100P23497 879 aaPredicted RBP13.47□□□□□ -0.25
SNORD55-201ENST00000581525 PIK3CAP42336 1068 aa13.47□□□□□ -0.25
SNORD55-201ENST00000581525 NOP14P78316 857 aaKnown RBP13.47□□□□□ -0.25
SNORD55-201ENST00000581525 SIGLEC14Q08ET2 396 aa13.47□□□□□ -0.25
SNORD55-201ENST00000581525 CCDC142Q17RM4 750 aa13.47□□□□□ -0.25
SNORD55-201ENST00000581525 MGAT5BQ3V5L5 792 aa13.47□□□□□ -0.25
SNORD55-201ENST00000581525 SMYD5Q6GMV2 418 aa13.47□□□□□ -0.25
SNORD55-201ENST00000581525 TRIM67Q6ZTA4 783 aa13.47□□□□□ -0.25
SNORD55-201ENST00000581525 PDZD4Q76G19 769 aaPredicted RBP13.47□□□□□ -0.25
SNORD55-201ENST00000581525 GET4Q7L5D6 327 aaPredicted RBP13.47□□□□□ -0.25
SNORD55-201ENST00000581525 SPATA2LQ8IUW3 424 aaPredicted RBP13.47□□□□□ -0.25
SNORD55-201ENST00000581525 TTC39CQ8N584 583 aa13.47□□□□□ -0.25
SNORD55-201ENST00000581525 B3GALNT2Q8NCR0 500 aa13.47□□□□□ -0.25
SNORD55-201ENST00000581525 SHKBP1Q8TBC3 707 aa13.47□□□□□ -0.25
SNORD55-201ENST00000581525 WHAMMQ8TF30 809 aa13.47□□□□□ -0.25
SNORD55-201ENST00000581525 FGF14Q92915 247 aa13.47□□□□□ -0.25
SNORD55-201ENST00000581525 ASIC4Q96FT7 647 aa13.47□□□□□ -0.25
SNORD55-201ENST00000581525 TNIP3Q96KP6 325 aa13.47□□□□□ -0.25
SNORD55-201ENST00000581525 C8orf48Q96LL4 319 aa13.47□□□□□ -0.25
SNORD55-201ENST00000581525 PI4K2AQ9BTU6 479 aa13.47□□□□□ -0.25
SNORD55-201ENST00000581525 IMPG2Q9BZV3 1241 aa13.47□□□□□ -0.25
SNORD55-201ENST00000581525 DPEP3Q9H4B8 488 aa13.47□□□□□ -0.25
SNORD55-201ENST00000581525 ZNF334Q9HCZ1 680 aaPredicted RBP13.47□□□□□ -0.25
SNORD55-201ENST00000581525 ABI2Q9NYB9 513 aaPredicted RBP13.47□□□□□ -0.25
SNORD55-201ENST00000581525 IL37Q9NZH6 218 aa13.47□□□□□ -0.25
SNORD55-201ENST00000581525 ZMYM5Q9UJ78 669 aa13.47□□□□□ -0.25
SNORD55-201ENST00000581525 DUSP12Q9UNI6 340 aa13.47□□□□□ -0.25
SNORD55-201ENST00000581525 PRR33A8MZF0 331 aa13.46□□□□□ -0.25
SNORD55-201ENST00000581525 CILPO75339 1184 aa13.46□□□□□ -0.25
SNORD55-201ENST00000581525 ECI2O75521 394 aa13.46□□□□□ -0.25
SNORD55-201ENST00000581525 FCARP24071 287 aa13.46□□□□□ -0.25
SNORD55-201ENST00000581525 FMO5P49326 533 aa13.46□□□□□ -0.25
SNORD55-201ENST00000581525 STX17P56962 302 aa13.46□□□□□ -0.25
SNORD55-201ENST00000581525 PSMC1P62191 440 aaKnown RBP13.46□□□□□ -0.25
SNORD55-201ENST00000581525 MTMR3Q13615 1198 aa13.46□□□□□ -0.25
SNORD55-201ENST00000581525 PARM1Q6UWI2 310 aa13.46□□□□□ -0.25
SNORD55-201ENST00000581525 MTSS1LQ765P7 747 aa13.46□□□□□ -0.25
SNORD55-201ENST00000581525 TMEM150AQ86TG1 271 aa13.46□□□□□ -0.25
SNORD55-201ENST00000581525 UBR7Q8N806 425 aa13.46□□□□□ -0.25
SNORD55-201ENST00000581525 TATDN2Q93075 761 aa13.46□□□□□ -0.25
SNORD55-201ENST00000581525 MYLPFQ96A32 169 aa13.46□□□□□ -0.25
SNORD55-201ENST00000581525 ELSPBP1Q96BH3 223 aa13.46□□□□□ -0.25
SNORD55-201ENST00000581525 ELMO3Q96BJ8 720 aa13.46□□□□□ -0.25
SNORD55-201ENST00000581525 ASB16Q96NS5 453 aa13.46□□□□□ -0.25
SNORD55-201ENST00000581525 SEPT5Q99719 369 aaPredicted RBP13.46□□□□□ -0.25
SNORD55-201ENST00000581525 LPIN3Q9BQK8 851 aa13.46□□□□□ -0.25
SNORD55-201ENST00000581525 TTLL2Q9BWV7 592 aa13.46□□□□□ -0.25
SNORD55-201ENST00000581525 B3GNT5Q9BYG0 378 aa13.46□□□□□ -0.25
SNORD55-201ENST00000581525 NIF3L1Q9GZT8 377 aa13.46□□□□□ -0.25
SNORD55-201ENST00000581525 CSNK1G1Q9HCP0 422 aa13.46□□□□□ -0.25
SNORD55-201ENST00000581525 MBD3O95983 291 aa13.45□□□□□ -0.26
SNORD55-201ENST00000581525 CCDC192P0DO97 292 aa13.45□□□□□ -0.26
SNORD55-201ENST00000581525 PRKCSHP14314 528 aaPredicted RBP13.45□□□□□ -0.26
SNORD55-201ENST00000581525 BDNFP23560 247 aa13.45□□□□□ -0.26
SNORD55-201ENST00000581525 RAP1GAPP47736 663 aa13.45□□□□□ -0.26
SNORD55-201ENST00000581525 NDST1P52848 882 aa13.45□□□□□ -0.26
SNORD55-201ENST00000581525 VEPH1Q14D04 833 aa13.45□□□□□ -0.26
SNORD55-201ENST00000581525 DDR2Q16832 855 aa13.45□□□□□ -0.26
SNORD55-201ENST00000581525 DPCR1Q3MIW9 517 aa13.45□□□□□ -0.26
SNORD55-201ENST00000581525 MDH1BQ5I0G3 518 aa13.45□□□□□ -0.26
SNORD55-201ENST00000581525 CCDC150Q8NCX0 1101 aa13.45□□□□□ -0.26
SNORD55-201ENST00000581525 GIPC2Q8TF65 315 aa13.45□□□□□ -0.26
SNORD55-201ENST00000581525 RSAD2Q8WXG1 361 aa13.45□□□□□ -0.26
SNORD55-201ENST00000581525 MCRS1Q96EZ8 462 aa13.45□□□□□ -0.26
SNORD55-201ENST00000581525 ZSWIM3Q96MP5 696 aa13.45□□□□□ -0.26
SNORD55-201ENST00000581525 LRFN3Q9BTN0 628 aa13.45□□□□□ -0.26
SNORD55-201ENST00000581525 RPP25Q9BUL9 199 aaKnown RBP13.45□□□□□ -0.26
SNORD55-201ENST00000581525 ELOVL4Q9GZR5 314 aa13.45□□□□□ -0.26
SNORD55-201ENST00000581525 THAP9Q9H5L6 903 aa13.45□□□□□ -0.26
SNORD55-201ENST00000581525 SLC2A4RGQ9NR83 387 aa13.45□□□□□ -0.26
SNORD55-201ENST00000581525 TMEM30AQ9NV96 361 aa13.45□□□□□ -0.26
SNORD55-201ENST00000581525 UXTQ9UBK9 157 aaPredicted RBP13.45□□□□□ -0.26
SNORD55-201ENST00000581525 TECTAO75443 2155 aa13.45□□□□□ -0.26
SNORD55-201ENST00000581525 FAM92AA1XBS5 289 aa13.44□□□□□ -0.26
SNORD55-201ENST00000581525 SLC38A8A6NNN8 435 aa13.44□□□□□ -0.26
SNORD55-201ENST00000581525 TNFRSF10BO14763 440 aa13.44□□□□□ -0.26
SNORD55-201ENST00000581525 TRIM66O15016 1216 aa13.44□□□□□ -0.26
SNORD55-201ENST00000581525 SRFP11831 508 aa13.44□□□□□ -0.26
SNORD55-201ENST00000581525 MYL4P12829 197 aa13.44□□□□□ -0.26
SNORD55-201ENST00000581525 DDX6P26196 483 aaKnown RBP eCLIP13.44□□□□□ -0.26
SNORD55-201ENST00000581525 GABRR2P28476 465 aa13.44□□□□□ -0.26
SNORD55-201ENST00000581525 CDC25CP30307 473 aa13.44□□□□□ -0.26
SNORD55-201ENST00000581525 GPR15P49685 360 aa13.44□□□□□ -0.26
SNORD55-201ENST00000581525 KCNH2Q12809 1159 aa13.44□□□□□ -0.26
SNORD55-201ENST00000581525 CCDC40Q4G0X9 1142 aa13.44□□□□□ -0.26
SNORD55-201ENST00000581525 WDR44Q5JSH3 913 aa13.44□□□□□ -0.26
SNORD55-201ENST00000581525 FAM78AQ5JUQ0 283 aa13.44□□□□□ -0.26
SNORD55-201ENST00000581525 TMEM31Q5JXX7 168 aa13.44□□□□□ -0.26
SNORD55-201ENST00000581525 TCERG1LQ5VWI1 586 aa13.44□□□□□ -0.26
SNORD55-201ENST00000581525 FUKQ8N0W3 1084 aa13.44□□□□□ -0.26
SNORD55-201ENST00000581525 EHBP1Q8NDI1 1231 aa13.44□□□□□ -0.26
SNORD55-201ENST00000581525 SMARCD2Q92925 531 aa13.44□□□□□ -0.26
SNORD55-201ENST00000581525 E2F7Q96AV8 911 aa13.44□□□□□ -0.26
SNORD55-201ENST00000581525 TWNKQ96RR1 684 aa13.44□□□□□ -0.26
SNORD55-201ENST00000581525 HNRNPABQ99729 332 aaKnown RBP13.44□□□□□ -0.26
SNORD55-201ENST00000581525 NT5C1AQ9BXI3 368 aa13.44□□□□□ -0.26
SNORD55-201ENST00000581525 COMMD8Q9NX08 183 aa13.44□□□□□ -0.26
SNORD55-201ENST00000581525 OBP2AQ9NY56 170 aa13.44□□□□□ -0.26
SNORD55-201ENST00000581525 WNT16Q9UBV4 365 aa13.44□□□□□ -0.26
SNORD55-201ENST00000581525 DACH1Q9UI36 760 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms