RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 FDXRP22570 491 aa5.69□□□□□ -1.5
SMCHD1-205ENST00000581383 PLA2G5P39877 138 aa5.69□□□□□ -1.5
SMCHD1-205ENST00000581383 HSD11B2P80365 405 aa5.69□□□□□ -1.5
SMCHD1-205ENST00000581383 PIGFQ07326 219 aa5.69□□□□□ -1.5
SMCHD1-205ENST00000581383 ZNF844Q08AG5 666 aa5.69□□□□□ -1.5
SMCHD1-205ENST00000581383 MPP3Q13368 585 aa5.69□□□□□ -1.5
SMCHD1-205ENST00000581383 HIBCHQ6NVY1 386 aaPredicted RBP5.69□□□□□ -1.5
SMCHD1-205ENST00000581383 ATP11CQ8NB49 1132 aa5.69□□□□□ -1.5
SMCHD1-205ENST00000581383 OR56A3Q8NH54 315 aa5.69□□□□□ -1.5
SMCHD1-205ENST00000581383 KIAA1191Q96A73 305 aa5.69□□□□□ -1.5
SMCHD1-205ENST00000581383 VOPP1Q96AW1 172 aa5.69□□□□□ -1.5
SMCHD1-205ENST00000581383 ZNF764Q96H86 408 aaPredicted RBP5.69□□□□□ -1.5
SMCHD1-205ENST00000581383 LRIG1Q96JA1 1093 aa5.69□□□□□ -1.5
SMCHD1-205ENST00000581383 COQ10AQ96MF6 247 aa5.69□□□□□ -1.5
SMCHD1-205ENST00000581383 TRIB1Q96RU8 372 aa5.69□□□□□ -1.5
SMCHD1-205ENST00000581383 SMOQ99835 787 aa5.69□□□□□ -1.5
SMCHD1-205ENST00000581383 BRIP1Q9BX63 1249 aa5.69□□□□□ -1.5
SMCHD1-205ENST00000581383 STK31Q9BXU1 1019 aa5.69□□□□□ -1.5
SMCHD1-205ENST00000581383 RNPEPQ9H4A4 650 aa5.69□□□□□ -1.5
SMCHD1-205ENST00000581383 CERS4Q9HA82 394 aa5.69□□□□□ -1.5
SMCHD1-205ENST00000581383 A1CFQ9NQ94 594 aaKnown RBP5.69□□□□□ -1.5
SMCHD1-205ENST00000581383 GJB4Q9NTQ9 266 aa5.69□□□□□ -1.5
SMCHD1-205ENST00000581383 XPR1Q9UBH6 696 aa5.69□□□□□ -1.5
SMCHD1-205ENST00000581383 MTO1Q9Y2Z2 717 aaKnown RBP5.69□□□□□ -1.5
SMCHD1-205ENST00000581383 RIPOR2Q9Y4F9 1068 aa5.69□□□□□ -1.5
SMCHD1-205ENST00000581383 APOL1O14791 398 aa5.68□□□□□ -1.5
SMCHD1-205ENST00000581383 CHRM3P20309 590 aa5.68□□□□□ -1.5
SMCHD1-205ENST00000581383 ABCB4P21439 1286 aa5.68□□□□□ -1.5
SMCHD1-205ENST00000581383 FGFR4P22455 802 aa5.68□□□□□ -1.5
SMCHD1-205ENST00000581383 HTRA4P83105 476 aaPredicted RBP5.68□□□□□ -1.5
SMCHD1-205ENST00000581383 OCA2Q04671 838 aa5.68□□□□□ -1.5
SMCHD1-205ENST00000581383 DCAF12L1Q5VU92 463 aa5.68□□□□□ -1.5
SMCHD1-205ENST00000581383 IZUMO3Q5VZ72 239 aa5.68□□□□□ -1.5
SMCHD1-205ENST00000581383 TAPT1Q6NXT6 567 aa5.68□□□□□ -1.5
SMCHD1-205ENST00000581383 UNC13DQ70J99 1090 aa5.68□□□□□ -1.5
SMCHD1-205ENST00000581383 PPP1R32Q7Z5V6 425 aa5.68□□□□□ -1.5
SMCHD1-205ENST00000581383 RNF152Q8N8N0 203 aa5.68□□□□□ -1.5
SMCHD1-205ENST00000581383 RAPGEF4Q8WZA2 1011 aa5.68□□□□□ -1.5
SMCHD1-205ENST00000581383 SPATA5L1Q9BVQ7 753 aa5.68□□□□□ -1.5
SMCHD1-205ENST00000581383 ALOXE3Q9BYJ1 711 aa5.68□□□□□ -1.5
SMCHD1-205ENST00000581383 TTYH3Q9C0H2 523 aa5.68□□□□□ -1.5
SMCHD1-205ENST00000581383 MS4A7Q9GZW8 240 aaPredicted RBP5.68□□□□□ -1.5
SMCHD1-205ENST00000581383 CASS4Q9NQ75 786 aa5.68□□□□□ -1.5
SMCHD1-205ENST00000581383 TBCCD1Q9NVR7 557 aa5.68□□□□□ -1.5
SMCHD1-205ENST00000581383 ITGB1BP2Q9UKP3 347 aa5.68□□□□□ -1.5
SMCHD1-205ENST00000581383 CCDC195A0A1B0GUA6 201 aa5.67□□□□□ -1.5
SMCHD1-205ENST00000581383 ABHD14A-ACY1A0A1B0GW23 586 aa5.67□□□□□ -1.5
SMCHD1-205ENST00000581383 SPDEFO95238 335 aa5.67□□□□□ -1.5
SMCHD1-205ENST00000581383 GPANK1O95872 356 aa5.67□□□□□ -1.5
SMCHD1-205ENST00000581383 SEC24CP53992 1094 aa5.67□□□□□ -1.5
SMCHD1-205ENST00000581383 BTKQ06187 659 aa5.67□□□□□ -1.5
SMCHD1-205ENST00000581383 TCF15Q12870 199 aa5.67□□□□□ -1.5
SMCHD1-205ENST00000581383 CHAF1AQ13111 956 aaPredicted RBP5.67□□□□□ -1.5
SMCHD1-205ENST00000581383 STK3Q13188 491 aa5.67□□□□□ -1.5
SMCHD1-205ENST00000581383 BOP1Q14137 746 aaKnown RBP5.67□□□□□ -1.5
SMCHD1-205ENST00000581383 ARL13BQ3SXY8 428 aa5.67□□□□□ -1.5
SMCHD1-205ENST00000581383 LONRF3Q496Y0 759 aa5.67□□□□□ -1.5
SMCHD1-205ENST00000581383 FBXO42Q6P3S6 717 aa5.67□□□□□ -1.5
SMCHD1-205ENST00000581383 RNF44Q7L0R7 432 aa5.67□□□□□ -1.5
SMCHD1-205ENST00000581383 MAPKAPK5Q8IW41 473 aa5.67□□□□□ -1.5
SMCHD1-205ENST00000581383 SNX22Q96L94 193 aa5.67□□□□□ -1.5
SMCHD1-205ENST00000581383 SLC46A1Q96NT5 459 aa5.67□□□□□ -1.5
SMCHD1-205ENST00000581383 DUSP26Q9BV47 211 aa5.67□□□□□ -1.5
SMCHD1-205ENST00000581383 CHST8Q9H2A9 424 aa5.67□□□□□ -1.5
SMCHD1-205ENST00000581383 MYH16Q9H6N6 1097 aa5.67□□□□□ -1.5
SMCHD1-205ENST00000581383 ARFGAP3Q9NP61 516 aa5.67□□□□□ -1.5
SMCHD1-205ENST00000581383 ETAA1Q9NY74 926 aa5.67□□□□□ -1.5
SMCHD1-205ENST00000581383 LRIT1Q9P2V4 623 aa5.67□□□□□ -1.5
SMCHD1-205ENST00000581383 TLK1Q9UKI8 766 aa5.67□□□□□ -1.5
SMCHD1-205ENST00000581383 PADI4Q9UM07 663 aa5.67□□□□□ -1.5
SMCHD1-205ENST00000581383 TBC1D30Q9Y2I9 924 aa5.67□□□□□ -1.5
SMCHD1-205ENST00000581383 PCDHGB2Q9Y5G2 931 aa5.67□□□□□ -1.5
SMCHD1-205ENST00000581383 EPN1Q9Y6I3 576 aaPredicted RBP5.67□□□□□ -1.5
SMCHD1-205ENST00000581383 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.66□□□□□ -1.5
SMCHD1-205ENST00000581383 RASSF9O75901 435 aa5.66□□□□□ -1.5
SMCHD1-205ENST00000581383 FGF18O76093 207 aa5.66□□□□□ -1.5
SMCHD1-205ENST00000581383 MT-ND5P03915 603 aa5.66□□□□□ -1.5
SMCHD1-205ENST00000581383 ELANEP08246 267 aa5.66□□□□□ -1.5
SMCHD1-205ENST00000581383 HARSP12081 509 aaKnown RBP5.66□□□□□ -1.5
SMCHD1-205ENST00000581383 IL1R1P14778 569 aa5.66□□□□□ -1.5
SMCHD1-205ENST00000581383 ELLP55199 621 aaPredicted RBP5.66□□□□□ -1.5
SMCHD1-205ENST00000581383 C21orf58P58505 322 aa5.66□□□□□ -1.5
SMCHD1-205ENST00000581383 PMS2P11Q13670 270 aa5.66□□□□□ -1.5
SMCHD1-205ENST00000581383 SP5Q6BEB4 398 aaPredicted RBP5.66□□□□□ -1.5
SMCHD1-205ENST00000581383 TAF2Q6P1X5 1199 aa5.66□□□□□ -1.5
SMCHD1-205ENST00000581383 EXOC8Q8IYI6 725 aa5.66□□□□□ -1.5
SMCHD1-205ENST00000581383 ENAHQ8N8S7 591 aaPredicted RBP5.66□□□□□ -1.5
SMCHD1-205ENST00000581383 PSD4Q8NDX1 1056 aa5.66□□□□□ -1.5
SMCHD1-205ENST00000581383 ASB10Q8WXI3 467 aa5.66□□□□□ -1.5
SMCHD1-205ENST00000581383 BRI3BPQ8WY22 251 aa5.66□□□□□ -1.5
SMCHD1-205ENST00000581383 SLC9A6Q92581 669 aa5.66□□□□□ -1.5
SMCHD1-205ENST00000581383 IQCDQ96DY2 449 aa5.66□□□□□ -1.5
SMCHD1-205ENST00000581383 COLEC11Q9BWP8 271 aa5.66□□□□□ -1.5
SMCHD1-205ENST00000581383 CHMP4AQ9BY43 222 aa5.66□□□□□ -1.5
SMCHD1-205ENST00000581383 SMOC2Q9H3U7 446 aa5.66□□□□□ -1.5
SMCHD1-205ENST00000581383 SERHLQ9NQF3 203 aa5.66□□□□□ -1.5
SMCHD1-205ENST00000581383 TBC1D23Q9NUY8 699 aa5.66□□□□□ -1.5
SMCHD1-205ENST00000581383 CTTNBP2NLQ9P2B4 639 aa5.66□□□□□ -1.5
SMCHD1-205ENST00000581383 HESX1Q9UBX0 185 aa5.66□□□□□ -1.5
SMCHD1-205ENST00000581383 CDC23Q9UJX2 597 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms