RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 LINC00597Q9H2U6 94 aa20.62■□□□□ 0.89
NDEL1-209ENST00000580738 TRPC7Q9HCX4 862 aa20.62■□□□□ 0.89
NDEL1-209ENST00000580738 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.62■□□□□ 0.89
NDEL1-209ENST00000580738 DPP3Q9NY33 737 aa20.62■□□□□ 0.89
NDEL1-209ENST00000580738 LIMCH1Q9UPQ0 1083 aa20.62■□□□□ 0.89
NDEL1-209ENST00000580738 SCN1AP35498 2009 aa20.61■□□□□ 0.89
NDEL1-209ENST00000580738 K7ENM7 598 aa20.61■□□□□ 0.89
NDEL1-209ENST00000580738 DHPSP49366 369 aaPredicted RBP20.61■□□□□ 0.89
NDEL1-209ENST00000580738 SEC13P55735 322 aa20.61■□□□□ 0.89
NDEL1-209ENST00000580738 RING1Q06587 406 aa20.61■□□□□ 0.89
NDEL1-209ENST00000580738 C2orf27AQ580R0 203 aa20.61■□□□□ 0.89
NDEL1-209ENST00000580738 RASSF3Q86WH2 238 aa20.61■□□□□ 0.89
NDEL1-209ENST00000580738 USP33Q8TEY7 942 aa20.61■□□□□ 0.89
NDEL1-209ENST00000580738 PIGKQ92643 395 aa20.61■□□□□ 0.89
NDEL1-209ENST00000580738 ATP2A3Q93084 1043 aa20.61■□□□□ 0.89
NDEL1-209ENST00000580738 CCSER1Q9C0I3 900 aa20.61■□□□□ 0.89
NDEL1-209ENST00000580738 MYH11P35749 1972 aa20.61■□□□□ 0.89
NDEL1-209ENST00000580738 DENND4CQ5VZ89 1909 aa20.61■□□□□ 0.89
NDEL1-209ENST00000580738 NUP205Q92621 2012 aa20.6■□□□□ 0.89
NDEL1-209ENST00000580738 NBEAQ8NFP9 2946 aa20.6■□□□□ 0.89
NDEL1-209ENST00000580738 KPNA7A9QM74 516 aa20.6■□□□□ 0.89
NDEL1-209ENST00000580738 TISP43B9A030 160 aa20.6■□□□□ 0.89
NDEL1-209ENST00000580738 ANKRD63C9JTQ0 380 aa20.6■□□□□ 0.89
NDEL1-209ENST00000580738 HYAL3O43820 417 aaPredicted RBP20.6■□□□□ 0.89
NDEL1-209ENST00000580738 IFNAR2P48551 515 aa20.6■□□□□ 0.89
NDEL1-209ENST00000580738 USP4Q13107 963 aa20.6■□□□□ 0.89
NDEL1-209ENST00000580738 LRSAM1Q6UWE0 723 aa20.6■□□□□ 0.89
NDEL1-209ENST00000580738 C11orf74Q86VG3 221 aa20.6■□□□□ 0.89
NDEL1-209ENST00000580738 EFCAB13Q8IY85 973 aa20.6■□□□□ 0.89
NDEL1-209ENST00000580738 MYCT1Q8N699 235 aa20.6■□□□□ 0.89
NDEL1-209ENST00000580738 FAM184AQ8NB25 1140 aa20.6■□□□□ 0.89
NDEL1-209ENST00000580738 MDGA1Q8NFP4 955 aa20.6■□□□□ 0.89
NDEL1-209ENST00000580738 ASB7Q9H672 318 aa20.6■□□□□ 0.89
NDEL1-209ENST00000580738 C2CD2Q9Y426 696 aa20.6■□□□□ 0.89
NDEL1-209ENST00000580738 OBSL1O75147 1896 aa20.59■□□□□ 0.89
NDEL1-209ENST00000580738 K7EQS6 105 aa20.59■□□□□ 0.89
NDEL1-209ENST00000580738 USP17L7P0C7H9 530 aa20.59■□□□□ 0.89
NDEL1-209ENST00000580738 CYP2F1P24903 491 aa20.59■□□□□ 0.89
NDEL1-209ENST00000580738 TMEM119Q4V9L6 283 aa20.59■□□□□ 0.89
NDEL1-209ENST00000580738 ZC2HC1CQ53FD0 456 aaPredicted RBP20.59■□□□□ 0.89
NDEL1-209ENST00000580738 CCDC33Q8N5R6 958 aa20.59■□□□□ 0.89
NDEL1-209ENST00000580738 KCTD17Q8N5Z5 321 aa20.59■□□□□ 0.89
NDEL1-209ENST00000580738 CDK5RAP3Q96JB5 506 aa20.59■□□□□ 0.89
NDEL1-209ENST00000580738 CNOT6LQ96LI5 555 aaKnown RBP20.59■□□□□ 0.89
NDEL1-209ENST00000580738 ODF2LQ9ULJ1 636 aa20.59■□□□□ 0.89
NDEL1-209ENST00000580738 ZNF638Q14966 1978 aaKnown RBP20.59■□□□□ 0.89
NDEL1-209ENST00000580738 NOL4O94818 638 aa20.58■□□□□ 0.89
NDEL1-209ENST00000580738 CKMP06732 381 aa20.58■□□□□ 0.89
NDEL1-209ENST00000580738 OPRD1P41143 372 aa20.58■□□□□ 0.89
NDEL1-209ENST00000580738 HMGN5P82970 282 aaKnown RBP20.58■□□□□ 0.89
NDEL1-209ENST00000580738 TSPY1Q01534 308 aa20.58■□□□□ 0.89
NDEL1-209ENST00000580738 DHX8Q14562 1220 aaKnown RBP20.58■□□□□ 0.89
NDEL1-209ENST00000580738 CCDC142Q17RM4 750 aa20.58■□□□□ 0.89
NDEL1-209ENST00000580738 GPBP1Q86WP2 473 aa20.58■□□□□ 0.89
NDEL1-209ENST00000580738 TTC30AQ86WT1 665 aa20.58■□□□□ 0.89
NDEL1-209ENST00000580738 ARL14EPQ8N8R7 260 aaPredicted RBP20.58■□□□□ 0.89
NDEL1-209ENST00000580738 SH3RF2Q8TEC5 729 aa20.58■□□□□ 0.89
NDEL1-209ENST00000580738 LRRC15Q8TF66 581 aa20.58■□□□□ 0.89
NDEL1-209ENST00000580738 RLN3Q8WXF3 142 aa20.58■□□□□ 0.89
NDEL1-209ENST00000580738 TRMT2BQ96GJ1 504 aaKnown RBP20.58■□□□□ 0.89
NDEL1-209ENST00000580738 MYRFLQ96LU7 910 aa20.58■□□□□ 0.89
NDEL1-209ENST00000580738 TMEM206Q9H813 350 aa20.58■□□□□ 0.89
NDEL1-209ENST00000580738 GCNT4Q9P109 453 aa20.58■□□□□ 0.89
NDEL1-209ENST00000580738 UXTQ9UBK9 157 aaPredicted RBP20.58■□□□□ 0.89
NDEL1-209ENST00000580738 KLK13Q9UKR3 277 aa20.58■□□□□ 0.89
NDEL1-209ENST00000580738 LHX6Q9UPM6 363 aa20.58■□□□□ 0.89
NDEL1-209ENST00000580738 MYO16Q9Y6X6 1858 aa20.58■□□□□ 0.88
NDEL1-209ENST00000580738 KIAA1549LQ6ZVL6 1849 aa20.57■□□□□ 0.88
NDEL1-209ENST00000580738 ITPR1Q14643 2758 aa20.57■□□□□ 0.88
NDEL1-209ENST00000580738 THADAQ6YHU6 1953 aa20.57■□□□□ 0.88
NDEL1-209ENST00000580738 TRAV19A0A0A6YYK7 116 aa20.57■□□□□ 0.88
NDEL1-209ENST00000580738 VWA3AA6NCI4 1184 aa20.57■□□□□ 0.88
NDEL1-209ENST00000580738 C2orf78A6NCI8 922 aa20.57■□□□□ 0.88
NDEL1-209ENST00000580738 TRAK2O60296 914 aa20.57■□□□□ 0.88
NDEL1-209ENST00000580738 HNRNPLP14866 589 aaKnown RBP eCLIP20.57■□□□□ 0.88
NDEL1-209ENST00000580738 ACAT1P24752 427 aaKnown RBP20.57■□□□□ 0.88
NDEL1-209ENST00000580738 MAPK8P45983 427 aa20.57■□□□□ 0.88
NDEL1-209ENST00000580738 ZNF131P52739 623 aa20.57■□□□□ 0.88
NDEL1-209ENST00000580738 ATP2C1P98194 919 aaPredicted RBP20.57■□□□□ 0.88
NDEL1-209ENST00000580738 NR1H3Q13133 447 aa20.57■□□□□ 0.88
NDEL1-209ENST00000580738 CRY1Q16526 586 aa20.57■□□□□ 0.88
NDEL1-209ENST00000580738 NFE2Q16621 373 aaPredicted RBP20.57■□□□□ 0.88
NDEL1-209ENST00000580738 SV2CQ496J9 727 aa20.57■□□□□ 0.88
NDEL1-209ENST00000580738 TRIM61Q5EBN2 209 aa20.57■□□□□ 0.88
NDEL1-209ENST00000580738 ADALQ6DHV7 355 aa20.57■□□□□ 0.88
NDEL1-209ENST00000580738 PDCL2Q8N4E4 241 aa20.57■□□□□ 0.88
NDEL1-209ENST00000580738 FRMD1Q8N878 549 aa20.57■□□□□ 0.88
NDEL1-209ENST00000580738 FIZ1Q96SL8 496 aa20.57■□□□□ 0.88
NDEL1-209ENST00000580738 IKZF4Q9H2S9 585 aa20.57■□□□□ 0.88
NDEL1-209ENST00000580738 TMEM74BQ9NUR3 256 aa20.57■□□□□ 0.88
NDEL1-209ENST00000580738 EVLQ9UI08 416 aaPredicted RBP20.57■□□□□ 0.88
NDEL1-209ENST00000580738 MMP17Q9ULZ9 603 aa20.57■□□□□ 0.88
NDEL1-209ENST00000580738 NEUROG3Q9Y4Z2 214 aa20.57■□□□□ 0.88
NDEL1-209ENST00000580738 ASCC3Q8N3C0 2202 aaKnown RBP20.57■□□□□ 0.88
NDEL1-209ENST00000580738 CACNA1EQ15878 2313 aa20.56■□□□□ 0.88
NDEL1-209ENST00000580738 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.56■□□□□ 0.88
NDEL1-209ENST00000580738 SPAARA0A1B0GVQ0 90 aa20.56■□□□□ 0.88
NDEL1-209ENST00000580738 FAM13AO94988 1023 aa20.56■□□□□ 0.88
NDEL1-209ENST00000580738 SCP2P22307 547 aa20.56■□□□□ 0.88
NDEL1-209ENST00000580738 RPL10AP62906 217 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms