RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 LAG3P18627 525 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 GPD2P43304 727 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 HTRA4P83105 476 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 TSPY1Q01534 308 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 C2CD6Q53TS8 623 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 INTS6LQ5JSJ4 861 aaKnown RBP14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 VARS2Q5ST30 1063 aaKnown RBP14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 MON1BQ7L1V2 547 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 TTC30AQ86WT1 665 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 HERC6Q8IVU3 1022 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 OR10T2Q8NGX3 314 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 RFFLQ8WZ73 363 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 TRIM11Q96F44 468 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 IGSF21Q96ID5 467 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 MED10Q9BTT4 135 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 MYO1AQ9UBC5 1043 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 CYTH4Q9UIA0 394 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 INSL6Q9Y581 213 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 NR2E3Q9Y5X4 410 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 A0A0A6YYK5 440 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 MYBPHLA2RUH7 354 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 KIF2AO00139 706 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 OAZ2O95190 189 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 MYBL1P10243 752 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 ATP2A2P16615 1042 aaKnown RBP14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 FGFR3P22607 806 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 MMP8P22894 467 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 NOP2P46087 812 aaKnown RBP14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 CDR1P51861 262 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 ETF1P62495 437 aaKnown RBP14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 C1QBPQ07021 282 aaKnown RBP14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 PKDCCQ504Y2 493 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 ZNF569Q5MCW4 686 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 LIN9Q5TKA1 542 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 ERICH1Q86X53 443 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 FUKQ8N0W3 1084 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 RNF10Q8N5U6 811 aaKnown RBP14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 ANKRD52Q8NB46 1076 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 COLGALT1Q8NBJ5 622 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 SLC35G2Q8TBE7 412 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 MYCBPAPQ8TBZ2 947 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 PHOSPHO2Q8TCD6 241 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 VCPIP1Q96JH7 1222 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 B3GALT6Q96L58 329 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 NOX5Q96PH1 765 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 TMEM209Q96SK2 561 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 HNRNPABQ99729 332 aaKnown RBP14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 CNOT8Q9UFF9 292 aaKnown RBP14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 GTF3C4Q9UKN8 822 aa14.65□□□□□ -0.06
CDK5RAP3-219ENST00000580670 VWA8A3KMH1 1905 aa14.64□□□□□ -0.07
CDK5RAP3-219ENST00000580670 CARNS1A5YM72 827 aa14.64□□□□□ -0.07
CDK5RAP3-219ENST00000580670 CLDN5O00501 218 aa14.64□□□□□ -0.07
CDK5RAP3-219ENST00000580670 CYP1A2P05177 515 aa14.64□□□□□ -0.07
CDK5RAP3-219ENST00000580670 CALB1P05937 261 aa14.64□□□□□ -0.07
CDK5RAP3-219ENST00000580670 BCAT1P54687 386 aa14.64□□□□□ -0.07
CDK5RAP3-219ENST00000580670 BST2Q10589 180 aaKnown RBP14.64□□□□□ -0.07
CDK5RAP3-219ENST00000580670 PTP4A2Q12974 167 aa14.64□□□□□ -0.07
CDK5RAP3-219ENST00000580670 PDCLQ13371 301 aa14.64□□□□□ -0.07
CDK5RAP3-219ENST00000580670 SYT10Q6XYQ8 523 aa14.64□□□□□ -0.07
CDK5RAP3-219ENST00000580670 TAS1R1Q7RTX1 841 aa14.64□□□□□ -0.07
CDK5RAP3-219ENST00000580670 PHLDB2Q86SQ0 1253 aa14.64□□□□□ -0.07
CDK5RAP3-219ENST00000580670 TNS4Q8IZW8 715 aa14.64□□□□□ -0.07
CDK5RAP3-219ENST00000580670 SLC39A11Q8N1S5 342 aa14.64□□□□□ -0.07
CDK5RAP3-219ENST00000580670 FIBCD1Q8N539 461 aa14.64□□□□□ -0.07
CDK5RAP3-219ENST00000580670 MSANTD4Q8NCY6 345 aa14.64□□□□□ -0.07
CDK5RAP3-219ENST00000580670 PCED1BQ96HM7 432 aa14.64□□□□□ -0.07
CDK5RAP3-219ENST00000580670 RAD9AQ99638 391 aa14.64□□□□□ -0.07
CDK5RAP3-219ENST00000580670 B3GNT5Q9BYG0 378 aa14.64□□□□□ -0.07
CDK5RAP3-219ENST00000580670 CTTNBP2NLQ9P2B4 639 aa14.64□□□□□ -0.07
CDK5RAP3-219ENST00000580670 TUBB4AP04350 444 aa14.63□□□□□ -0.07
CDK5RAP3-219ENST00000580670 SETSIPP0DME0 302 aa14.63□□□□□ -0.07
CDK5RAP3-219ENST00000580670 RRM1P23921 792 aa14.63□□□□□ -0.07
CDK5RAP3-219ENST00000580670 PLCB3Q01970 1234 aa14.63□□□□□ -0.07
CDK5RAP3-219ENST00000580670 PDE4CQ08493 712 aa14.63□□□□□ -0.07
CDK5RAP3-219ENST00000580670 MAPRE1Q15691 268 aaKnown RBP14.63□□□□□ -0.07
CDK5RAP3-219ENST00000580670 PTPN20Q4JDL3 420 aa14.63□□□□□ -0.07
CDK5RAP3-219ENST00000580670 CTXN3Q4LDR2 81 aa14.63□□□□□ -0.07
CDK5RAP3-219ENST00000580670 ZNF280DQ6N043 979 aa14.63□□□□□ -0.07
CDK5RAP3-219ENST00000580670 FAM171BQ6P995 826 aa14.63□□□□□ -0.07
CDK5RAP3-219ENST00000580670 PAQR9Q6ZVX9 377 aa14.63□□□□□ -0.07
CDK5RAP3-219ENST00000580670 RHOT2Q8IXI1 618 aa14.63□□□□□ -0.07
CDK5RAP3-219ENST00000580670 MYLPFQ96A32 169 aa14.63□□□□□ -0.07
CDK5RAP3-219ENST00000580670 TMEM169Q96HH4 297 aa14.63□□□□□ -0.07
CDK5RAP3-219ENST00000580670 WDR24Q96S15 920 aa14.63□□□□□ -0.07
CDK5RAP3-219ENST00000580670 CPXM1Q96SM3 734 aa14.63□□□□□ -0.07
CDK5RAP3-219ENST00000580670 PKMYT1Q99640 499 aa14.63□□□□□ -0.07
CDK5RAP3-219ENST00000580670 TTPALQ9BTX7 342 aa14.63□□□□□ -0.07
CDK5RAP3-219ENST00000580670 SYNCQ9H7C4 482 aa14.63□□□□□ -0.07
CDK5RAP3-219ENST00000580670 OSGEPQ9NPF4 335 aa14.63□□□□□ -0.07
CDK5RAP3-219ENST00000580670 ST7Q9NRC1 585 aa14.63□□□□□ -0.07
CDK5RAP3-219ENST00000580670 AAASQ9NRG9 546 aa14.63□□□□□ -0.07
CDK5RAP3-219ENST00000580670 SPG21Q9NZD8 308 aa14.63□□□□□ -0.07
CDK5RAP3-219ENST00000580670 CHORDC1Q9UHD1 332 aaPredicted RBP14.63□□□□□ -0.07
CDK5RAP3-219ENST00000580670 DNAI1Q9UI46 699 aa14.63□□□□□ -0.07
CDK5RAP3-219ENST00000580670 CAPN6Q9Y6Q1 641 aa14.63□□□□□ -0.07
CDK5RAP3-219ENST00000580670 TLL1O43897 1013 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 EFEMP2O95967 443 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 MAGEA10P43363 369 aaPredicted RBP14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 SLC8A3P57103 927 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 MRPL58Q14197 206 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms