RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 VNN1O95497 513 aa11.63□□□□□ -0.55
NDEL1-208ENST00000580237 LMO2P25791 158 aa11.63□□□□□ -0.55
NDEL1-208ENST00000580237 GRIK1P39086 918 aa11.63□□□□□ -0.55
NDEL1-208ENST00000580237 NOP14P78316 857 aaKnown RBP11.63□□□□□ -0.55
NDEL1-208ENST00000580237 CYP4F8P98187 520 aa11.63□□□□□ -0.55
NDEL1-208ENST00000580237 FKBP3Q00688 224 aaKnown RBP11.63□□□□□ -0.55
NDEL1-208ENST00000580237 GRM2Q14416 872 aa11.63□□□□□ -0.55
NDEL1-208ENST00000580237 DDR2Q16832 855 aa11.63□□□□□ -0.55
NDEL1-208ENST00000580237 CFAP221Q4G0U5 840 aa11.63□□□□□ -0.55
NDEL1-208ENST00000580237 COBLL1Q53SF7 1204 aa11.63□□□□□ -0.55
NDEL1-208ENST00000580237 SDHAF4Q5VUM1 108 aa11.63□□□□□ -0.55
NDEL1-208ENST00000580237 YAF2Q8IY57 180 aa11.63□□□□□ -0.55
NDEL1-208ENST00000580237 ELOA2Q8IYF1 753 aaPredicted RBP11.63□□□□□ -0.55
NDEL1-208ENST00000580237 ADSSL1Q8N142 457 aa11.63□□□□□ -0.55
NDEL1-208ENST00000580237 SPATA20Q8TB22 786 aa11.63□□□□□ -0.55
NDEL1-208ENST00000580237 MRPS31Q92665 395 aaKnown RBP11.63□□□□□ -0.55
NDEL1-208ENST00000580237 TAF4BQ92750 862 aa11.63□□□□□ -0.55
NDEL1-208ENST00000580237 ELSPBP1Q96BH3 223 aa11.63□□□□□ -0.55
NDEL1-208ENST00000580237 ELMO3Q96BJ8 720 aa11.63□□□□□ -0.55
NDEL1-208ENST00000580237 PCED1BQ96HM7 432 aa11.63□□□□□ -0.55
NDEL1-208ENST00000580237 TNIP3Q96KP6 325 aa11.63□□□□□ -0.55
NDEL1-208ENST00000580237 ASB16Q96NS5 453 aa11.63□□□□□ -0.55
NDEL1-208ENST00000580237 PKMYT1Q99640 499 aa11.63□□□□□ -0.55
NDEL1-208ENST00000580237 MED10Q9BTT4 135 aa11.63□□□□□ -0.55
NDEL1-208ENST00000580237 RPP25Q9BUL9 199 aaKnown RBP11.63□□□□□ -0.55
NDEL1-208ENST00000580237 DNAI2Q9GZS0 605 aa11.63□□□□□ -0.55
NDEL1-208ENST00000580237 BRD9Q9H8M2 597 aa11.63□□□□□ -0.55
NDEL1-208ENST00000580237 VRTNQ9H8Y1 702 aa11.63□□□□□ -0.55
NDEL1-208ENST00000580237 TMEM8AQ9HCN3 771 aa11.63□□□□□ -0.55
NDEL1-208ENST00000580237 CRTAC1Q9NQ79 661 aa11.63□□□□□ -0.55
NDEL1-208ENST00000580237 SLC2A4RGQ9NR83 387 aa11.63□□□□□ -0.55
NDEL1-208ENST00000580237 UXTQ9UBK9 157 aaPredicted RBP11.63□□□□□ -0.55
NDEL1-208ENST00000580237 WNT16Q9UBV4 365 aa11.63□□□□□ -0.55
NDEL1-208ENST00000580237 CTNND2Q9UQB3 1225 aa11.63□□□□□ -0.55
NDEL1-208ENST00000580237 BICDL2A1A5D9 508 aa11.62□□□□□ -0.55
NDEL1-208ENST00000580237 TRIM66O15016 1216 aa11.62□□□□□ -0.55
NDEL1-208ENST00000580237 MOSPD3O75425 235 aa11.62□□□□□ -0.55
NDEL1-208ENST00000580237 ASS1P00966 412 aaKnown RBP11.62□□□□□ -0.55
NDEL1-208ENST00000580237 BDNFP23560 247 aa11.62□□□□□ -0.55
NDEL1-208ENST00000580237 MAGEA11P43364 429 aa11.62□□□□□ -0.55
NDEL1-208ENST00000580237 VCPP55072 806 aaKnown RBP11.62□□□□□ -0.55
NDEL1-208ENST00000580237 GPC5P78333 572 aa11.62□□□□□ -0.55
NDEL1-208ENST00000580237 ENPEPQ07075 957 aa11.62□□□□□ -0.55
NDEL1-208ENST00000580237 CCDC40Q4G0X9 1142 aa11.62□□□□□ -0.55
NDEL1-208ENST00000580237 STXBP5Q5T5C0 1151 aa11.62□□□□□ -0.55
NDEL1-208ENST00000580237 KRT39Q6A163 491 aa11.62□□□□□ -0.55
NDEL1-208ENST00000580237 TANGO2Q6ICL3 276 aa11.62□□□□□ -0.55
NDEL1-208ENST00000580237 SPOPLQ6IQ16 392 aa11.62□□□□□ -0.55
NDEL1-208ENST00000580237 FAM171BQ6P995 826 aa11.62□□□□□ -0.55
NDEL1-208ENST00000580237 VSTM1Q6UX27 236 aa11.62□□□□□ -0.55
NDEL1-208ENST00000580237 GAREM2Q75VX8 874 aa11.62□□□□□ -0.55
NDEL1-208ENST00000580237 LIMS2Q7Z4I7 341 aa11.62□□□□□ -0.55
NDEL1-208ENST00000580237 B3GALNT2Q8NCR0 500 aa11.62□□□□□ -0.55
NDEL1-208ENST00000580237 MYCBPAPQ8TBZ2 947 aa11.62□□□□□ -0.55
NDEL1-208ENST00000580237 DEPDC1BQ8WUY9 529 aa11.62□□□□□ -0.55
NDEL1-208ENST00000580237 NELFBQ8WX92 580 aa11.62□□□□□ -0.55
NDEL1-208ENST00000580237 DHTKD1Q96HY7 919 aaPredicted RBP11.62□□□□□ -0.55
NDEL1-208ENST00000580237 LRRC3Q9BY71 257 aa11.62□□□□□ -0.55
NDEL1-208ENST00000580237 ELOVL4Q9GZR5 314 aa11.62□□□□□ -0.55
NDEL1-208ENST00000580237 NIF3L1Q9GZT8 377 aa11.62□□□□□ -0.55
NDEL1-208ENST00000580237 DPEP3Q9H4B8 488 aa11.62□□□□□ -0.55
NDEL1-208ENST00000580237 TBC1D17Q9HA65 648 aa11.62□□□□□ -0.55
NDEL1-208ENST00000580237 SLC38A8A6NNN8 435 aa11.61□□□□□ -0.55
NDEL1-208ENST00000580237 NRG2O14511 850 aaPredicted RBP11.61□□□□□ -0.55
NDEL1-208ENST00000580237 FAM163BP0C2L3 166 aa11.61□□□□□ -0.55
NDEL1-208ENST00000580237 PTPN1P18031 435 aaKnown RBP11.61□□□□□ -0.55
NDEL1-208ENST00000580237 FCARP24071 287 aa11.61□□□□□ -0.55
NDEL1-208ENST00000580237 CCNE1P24864 410 aa11.61□□□□□ -0.55
NDEL1-208ENST00000580237 GTF2H1P32780 548 aa11.61□□□□□ -0.55
NDEL1-208ENST00000580237 AVPR1AP37288 418 aa11.61□□□□□ -0.55
NDEL1-208ENST00000580237 VIPR2P41587 438 aa11.61□□□□□ -0.55
NDEL1-208ENST00000580237 PMS1P54277 932 aaKnown RBP11.61□□□□□ -0.55
NDEL1-208ENST00000580237 CDH8P55286 799 aa11.61□□□□□ -0.55
NDEL1-208ENST00000580237 NLRP12P59046 1061 aa11.61□□□□□ -0.55
NDEL1-208ENST00000580237 PPP3CAQ08209 521 aa11.61□□□□□ -0.55
NDEL1-208ENST00000580237 IFRD2Q12894 506 aaPredicted RBP11.61□□□□□ -0.55
NDEL1-208ENST00000580237 PAK1Q13153 545 aa11.61□□□□□ -0.55
NDEL1-208ENST00000580237 MLF2Q15773 248 aaPredicted RBP11.61□□□□□ -0.55
NDEL1-208ENST00000580237 CAMK4Q16566 473 aa11.61□□□□□ -0.55
NDEL1-208ENST00000580237 C1orf220Q5T0J3 134 aa11.61□□□□□ -0.55
NDEL1-208ENST00000580237 ANKRD40Q6AI12 368 aa11.61□□□□□ -0.55
NDEL1-208ENST00000580237 ASTLQ6HA08 431 aaPredicted RBP11.61□□□□□ -0.55
NDEL1-208ENST00000580237 TAS1R2Q8TE23 839 aa11.61□□□□□ -0.55
NDEL1-208ENST00000580237 E2F7Q96AV8 911 aa11.61□□□□□ -0.55
NDEL1-208ENST00000580237 SHDQ96IW2 340 aa11.61□□□□□ -0.55
NDEL1-208ENST00000580237 ZSWIM3Q96MP5 696 aa11.61□□□□□ -0.55
NDEL1-208ENST00000580237 GBP4Q96PP9 640 aa11.61□□□□□ -0.55
NDEL1-208ENST00000580237 PRRX2Q99811 253 aa11.61□□□□□ -0.55
NDEL1-208ENST00000580237 TRMT61BQ9BVS5 477 aaKnown RBP11.61□□□□□ -0.55
NDEL1-208ENST00000580237 TASP1Q9H6P5 420 aa11.61□□□□□ -0.55
NDEL1-208ENST00000580237 TRPC7Q9HCX4 862 aa11.61□□□□□ -0.55
NDEL1-208ENST00000580237 EHD2Q9NZN4 543 aa11.61□□□□□ -0.55
NDEL1-208ENST00000580237 ARMCX3Q9UH62 379 aaPredicted RBP11.61□□□□□ -0.55
NDEL1-208ENST00000580237 ZMYM5Q9UJ78 669 aa11.61□□□□□ -0.55
NDEL1-208ENST00000580237 TRIOO75962 3097 aa11.61□□□□□ -0.55
NDEL1-208ENST00000580237 COL4A2P08572 1712 aa11.6□□□□□ -0.55
NDEL1-208ENST00000580237 COL4A3Q01955 1670 aa11.6□□□□□ -0.55
NDEL1-208ENST00000580237 KRBA1A5PL33 1030 aa11.6□□□□□ -0.55
NDEL1-208ENST00000580237 HEPACAM2A8MVW5 462 aa11.6□□□□□ -0.55
NDEL1-208ENST00000580237 F8VP50 259 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms