RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 HIP1RO75146 1068 aa12.1□□□□□ -0.47
SUPT4H1-203ENST00000579289 TOM1L1O75674 476 aa12.1□□□□□ -0.47
SUPT4H1-203ENST00000579289 DDX6P26196 483 aaKnown RBP eCLIP12.1□□□□□ -0.47
SUPT4H1-203ENST00000579289 KIR2DL1P43626 348 aaPredicted RBP12.1□□□□□ -0.47
SUPT4H1-203ENST00000579289 TUFMP49411 452 aaKnown RBP12.1□□□□□ -0.47
SUPT4H1-203ENST00000579289 FAM160A1Q05DH4 1040 aa12.1□□□□□ -0.47
SUPT4H1-203ENST00000579289 DMP1Q13316 513 aaPredicted RBP12.1□□□□□ -0.47
SUPT4H1-203ENST00000579289 CAMK2BQ13554 666 aa12.1□□□□□ -0.47
SUPT4H1-203ENST00000579289 ENOX2Q16206 610 aaKnown RBP12.1□□□□□ -0.47
SUPT4H1-203ENST00000579289 ZC2HC1CQ53FD0 456 aaPredicted RBP12.1□□□□□ -0.47
SUPT4H1-203ENST00000579289 C2orf27AQ580R0 203 aa12.1□□□□□ -0.47
SUPT4H1-203ENST00000579289 EMC10Q5UCC4 262 aa12.1□□□□□ -0.47
SUPT4H1-203ENST00000579289 SPATA1Q5VX52 437 aa12.1□□□□□ -0.47
SUPT4H1-203ENST00000579289 C1orf186Q6ZWK4 172 aa12.1□□□□□ -0.47
SUPT4H1-203ENST00000579289 KCNK18Q7Z418 384 aa12.1□□□□□ -0.47
SUPT4H1-203ENST00000579289 PHTF2Q8N3S3 785 aa12.1□□□□□ -0.47
SUPT4H1-203ENST00000579289 CCDC33Q8N5R6 958 aa12.1□□□□□ -0.47
SUPT4H1-203ENST00000579289 PNPLA1Q8N8W4 532 aa12.1□□□□□ -0.47
SUPT4H1-203ENST00000579289 TMEM161BQ8NDZ6 487 aa12.1□□□□□ -0.47
SUPT4H1-203ENST00000579289 MYRFLQ96LU7 910 aa12.1□□□□□ -0.47
SUPT4H1-203ENST00000579289 PKMYT1Q99640 499 aa12.1□□□□□ -0.47
SUPT4H1-203ENST00000579289 SEPT5Q99719 369 aaPredicted RBP12.1□□□□□ -0.47
SUPT4H1-203ENST00000579289 ANKFY1Q9P2R3 1169 aa12.1□□□□□ -0.47
SUPT4H1-203ENST00000579289 ORC3Q9UBD5 711 aaPredicted RBP12.1□□□□□ -0.47
SUPT4H1-203ENST00000579289 SLC6A14Q9UN76 642 aa12.1□□□□□ -0.47
SUPT4H1-203ENST00000579289 ZNF462Q96JM2 2506 aa12.1□□□□□ -0.47
SUPT4H1-203ENST00000579289 ZNF638Q14966 1978 aaKnown RBP12.1□□□□□ -0.47
SUPT4H1-203ENST00000579289 URB1O60287 2271 aaKnown RBP12.09□□□□□ -0.47
SUPT4H1-203ENST00000579289 MGAQ8IWI9 3026 aa12.09□□□□□ -0.47
SUPT4H1-203ENST00000579289 SH3BP5O60239 455 aa12.09□□□□□ -0.47
SUPT4H1-203ENST00000579289 SERPINF2P08697 491 aa12.09□□□□□ -0.47
SUPT4H1-203ENST00000579289 FTH1P19P0C7X4 201 aa12.09□□□□□ -0.47
SUPT4H1-203ENST00000579289 MAPTP10636 758 aaKnown RBP12.09□□□□□ -0.47
SUPT4H1-203ENST00000579289 HOXD12P35452 270 aa12.09□□□□□ -0.47
SUPT4H1-203ENST00000579289 AVPR1AP37288 418 aa12.09□□□□□ -0.47
SUPT4H1-203ENST00000579289 AMPD2Q01433 879 aa12.09□□□□□ -0.47
SUPT4H1-203ENST00000579289 NBR1Q14596 966 aa12.09□□□□□ -0.47
SUPT4H1-203ENST00000579289 NOLC1Q14978 699 aaKnown RBP eCLIP12.09□□□□□ -0.47
SUPT4H1-203ENST00000579289 SAFBQ15424 915 aaKnown RBP eCLIP12.09□□□□□ -0.47
SUPT4H1-203ENST00000579289 MGAT5BQ3V5L5 792 aa12.09□□□□□ -0.47
SUPT4H1-203ENST00000579289 C9orf57Q5W0N0 161 aa12.09□□□□□ -0.47
SUPT4H1-203ENST00000579289 SCARA3Q6AZY7 606 aa12.09□□□□□ -0.47
SUPT4H1-203ENST00000579289 ZPBP2Q6X784 338 aa12.09□□□□□ -0.47
SUPT4H1-203ENST00000579289 APBB1IPQ7Z5R6 666 aaPredicted RBP12.09□□□□□ -0.47
SUPT4H1-203ENST00000579289 SLC41A1Q8IVJ1 513 aa12.09□□□□□ -0.47
SUPT4H1-203ENST00000579289 EFCAB13Q8IY85 973 aa12.09□□□□□ -0.47
SUPT4H1-203ENST00000579289 CPA6Q8N4T0 437 aa12.09□□□□□ -0.47
SUPT4H1-203ENST00000579289 MINDY1Q8N5J2 469 aa12.09□□□□□ -0.47
SUPT4H1-203ENST00000579289 BAHD1Q8TBE0 780 aaPredicted RBP12.09□□□□□ -0.47
SUPT4H1-203ENST00000579289 GTF3C6Q969F1 213 aa12.09□□□□□ -0.47
SUPT4H1-203ENST00000579289 LRIG1Q96JA1 1093 aa12.09□□□□□ -0.47
SUPT4H1-203ENST00000579289 CCDC86Q9H6F5 360 aaKnown RBP12.09□□□□□ -0.47
SUPT4H1-203ENST00000579289 DUS2Q9NX74 493 aaKnown RBP12.09□□□□□ -0.47
SUPT4H1-203ENST00000579289 UBQLN1Q9UMX0 589 aaKnown RBP12.09□□□□□ -0.47
SUPT4H1-203ENST00000579289 A0A087WV48 116 aa12.08□□□□□ -0.48
SUPT4H1-203ENST00000579289 CCDC169A6NNP5 214 aa12.08□□□□□ -0.48
SUPT4H1-203ENST00000579289 SFI1A8K8P3 1242 aa12.08□□□□□ -0.48
SUPT4H1-203ENST00000579289 E9PMD0 336 aa12.08□□□□□ -0.48
SUPT4H1-203ENST00000579289 SLC16A4O15374 487 aa12.08□□□□□ -0.48
SUPT4H1-203ENST00000579289 NOL4O94818 638 aa12.08□□□□□ -0.48
SUPT4H1-203ENST00000579289 HARSP12081 509 aaKnown RBP12.08□□□□□ -0.48
SUPT4H1-203ENST00000579289 XBP1P17861 261 aa12.08□□□□□ -0.48
SUPT4H1-203ENST00000579289 SLC6A11P48066 632 aa12.08□□□□□ -0.48
SUPT4H1-203ENST00000579289 ST3GAL1Q11201 340 aa12.08□□□□□ -0.48
SUPT4H1-203ENST00000579289 TRIP6Q15654 476 aaKnown RBP12.08□□□□□ -0.48
SUPT4H1-203ENST00000579289 SDHAF4Q5VUM1 108 aa12.08□□□□□ -0.48
SUPT4H1-203ENST00000579289 RINT1Q6NUQ1 792 aa12.08□□□□□ -0.48
SUPT4H1-203ENST00000579289 DSTYKQ6XUX3 929 aa12.08□□□□□ -0.48
SUPT4H1-203ENST00000579289 LPCAT2Q7L5N7 544 aa12.08□□□□□ -0.48
SUPT4H1-203ENST00000579289 GLRX5Q86SX6 157 aa12.08□□□□□ -0.48
SUPT4H1-203ENST00000579289 USP37Q86T82 979 aa12.08□□□□□ -0.48
SUPT4H1-203ENST00000579289 C12orf40Q86WS4 652 aa12.08□□□□□ -0.48
SUPT4H1-203ENST00000579289 MARCH9Q86YJ5 346 aa12.08□□□□□ -0.48
SUPT4H1-203ENST00000579289 DIS3L2Q8IYB7 885 aaKnown RBP12.08□□□□□ -0.48
SUPT4H1-203ENST00000579289 ALLCQ8N6M5 410 aa12.08□□□□□ -0.48
SUPT4H1-203ENST00000579289 NSUN7Q8NE18 718 aaKnown RBP12.08□□□□□ -0.48
SUPT4H1-203ENST00000579289 SPIRE2Q8WWL2 714 aa12.08□□□□□ -0.48
SUPT4H1-203ENST00000579289 KIF2CQ99661 725 aa12.08□□□□□ -0.48
SUPT4H1-203ENST00000579289 MMTAG2Q9BU76 263 aaKnown RBP12.08□□□□□ -0.48
SUPT4H1-203ENST00000579289 CCSER1Q9C0I3 900 aa12.08□□□□□ -0.48
SUPT4H1-203ENST00000579289 RBM19Q9Y4C8 960 aaKnown RBP12.08□□□□□ -0.48
SUPT4H1-203ENST00000579289 C2orf78A6NCI8 922 aa12.07□□□□□ -0.48
SUPT4H1-203ENST00000579289 ARHGAP33O14559 1287 aa12.07□□□□□ -0.48
SUPT4H1-203ENST00000579289 JAK2O60674 1132 aa12.07□□□□□ -0.48
SUPT4H1-203ENST00000579289 CLTAP09496 248 aa12.07□□□□□ -0.48
SUPT4H1-203ENST00000579289 CDC25AP30304 524 aa12.07□□□□□ -0.48
SUPT4H1-203ENST00000579289 MCM7P33993 719 aa12.07□□□□□ -0.48
SUPT4H1-203ENST00000579289 SEC13P55735 322 aa12.07□□□□□ -0.48
SUPT4H1-203ENST00000579289 MRPS21P82921 87 aaKnown RBP12.07□□□□□ -0.48
SUPT4H1-203ENST00000579289 BFSP1Q12934 665 aa12.07□□□□□ -0.48
SUPT4H1-203ENST00000579289 IL17AQ16552 155 aa12.07□□□□□ -0.48
SUPT4H1-203ENST00000579289 CCDC142Q17RM4 750 aa12.07□□□□□ -0.48
SUPT4H1-203ENST00000579289 DUOXA1Q1HG43 343 aa12.07□□□□□ -0.48
SUPT4H1-203ENST00000579289 LYSMD4Q5XG99 296 aa12.07□□□□□ -0.48
SUPT4H1-203ENST00000579289 SLC39A4Q6P5W5 647 aa12.07□□□□□ -0.48
SUPT4H1-203ENST00000579289 PCSK4Q6UW60 755 aa12.07□□□□□ -0.48
SUPT4H1-203ENST00000579289 TMPRSS7Q7RTY8 843 aa12.07□□□□□ -0.48
SUPT4H1-203ENST00000579289 ADGRG2Q8IZP9 1017 aa12.07□□□□□ -0.48
SUPT4H1-203ENST00000579289 TXNDC5Q8NBS9 432 aaKnown RBP12.07□□□□□ -0.48
SUPT4H1-203ENST00000579289 SPPL2BQ8TCT7 592 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms