RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 KLHDC9Q8NEP7 349 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 SPATA18Q8TC71 538 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 RAET1EQ8TD07 263 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 PXYLP1Q8TE99 480 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 LENG1Q96BZ8 264 aaPredicted RBP11.73□□□□□ -0.53
SKA2-204ENST00000578519 CAPNS2Q96L46 248 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 FMO2Q99518 471 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 FOXP3Q9BZS1 431 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 ST7Q9NRC1 585 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 TSPAN16Q9UKR8 245 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 ST3GAL5Q9UNP4 418 aa11.73□□□□□ -0.53
SKA2-204ENST00000578519 TCRBV5S1A1TA0A578 114 aa11.72□□□□□ -0.53
SKA2-204ENST00000578519 KIF3CO14782 793 aa11.72□□□□□ -0.53
SKA2-204ENST00000578519 DAPK3O43293 454 aa11.72□□□□□ -0.53
SKA2-204ENST00000578519 ADAMTS4O75173 837 aa11.72□□□□□ -0.53
SKA2-204ENST00000578519 GPD1P21695 349 aa11.72□□□□□ -0.53
SKA2-204ENST00000578519 WARSP23381 471 aaKnown RBP11.72□□□□□ -0.53
SKA2-204ENST00000578519 AKAP5P24588 427 aa11.72□□□□□ -0.53
SKA2-204ENST00000578519 SSTR3P32745 418 aaPredicted RBP11.72□□□□□ -0.53
SKA2-204ENST00000578519 PCK1P35558 622 aa11.72□□□□□ -0.53
SKA2-204ENST00000578519 MAP2K2P36507 400 aa11.72□□□□□ -0.53
SKA2-204ENST00000578519 LHX1P48742 406 aa11.72□□□□□ -0.53
SKA2-204ENST00000578519 GUCY2FP51841 1108 aa11.72□□□□□ -0.53
SKA2-204ENST00000578519 BCAT1P54687 386 aa11.72□□□□□ -0.53
SKA2-204ENST00000578519 BST2Q10589 180 aaKnown RBP11.72□□□□□ -0.53
SKA2-204ENST00000578519 PDCLQ13371 301 aa11.72□□□□□ -0.53
SKA2-204ENST00000578519 PTGISQ16647 500 aa11.72□□□□□ -0.53
SKA2-204ENST00000578519 GOLGA7BQ2TAP0 167 aa11.72□□□□□ -0.53
SKA2-204ENST00000578519 PTPN20Q4JDL3 420 aa11.72□□□□□ -0.53
SKA2-204ENST00000578519 TFDP3Q5H9I0 405 aa11.72□□□□□ -0.53
SKA2-204ENST00000578519 FAM102AQ5T9C2 384 aaPredicted RBP11.72□□□□□ -0.53
SKA2-204ENST00000578519 XYLT1Q86Y38 959 aa11.72□□□□□ -0.53
SKA2-204ENST00000578519 CCDC89Q8N998 374 aa11.72□□□□□ -0.53
SKA2-204ENST00000578519 ANKRD52Q8NB46 1076 aa11.72□□□□□ -0.53
SKA2-204ENST00000578519 HSFY1Q96LI6 401 aa11.72□□□□□ -0.53
SKA2-204ENST00000578519 CNPY3Q9BT09 278 aa11.72□□□□□ -0.53
SKA2-204ENST00000578519 TRAIPQ9BWF2 469 aa11.72□□□□□ -0.53
SKA2-204ENST00000578519 MAK16Q9BXY0 300 aaKnown RBP11.72□□□□□ -0.53
SKA2-204ENST00000578519 CREBZFQ9NS37 354 aa11.72□□□□□ -0.53
SKA2-204ENST00000578519 FAM105AQ9NUU6 356 aa11.72□□□□□ -0.53
SKA2-204ENST00000578519 WHRNQ9P202 907 aa11.72□□□□□ -0.53
SKA2-204ENST00000578519 DDX20Q9UHI6 824 aaKnown RBP11.72□□□□□ -0.53
SKA2-204ENST00000578519 DRG1Q9Y295 367 aaKnown RBP11.72□□□□□ -0.53
SKA2-204ENST00000578519 FAM170AA1A519 330 aa11.71□□□□□ -0.53
SKA2-204ENST00000578519 POLR3GO15318 223 aaPredicted RBP11.71□□□□□ -0.53
SKA2-204ENST00000578519 MEFVO15553 781 aaPredicted RBP11.71□□□□□ -0.53
SKA2-204ENST00000578519 ZNF623O75123 536 aa11.71□□□□□ -0.53
SKA2-204ENST00000578519 MYBL2P10244 700 aa11.71□□□□□ -0.53
SKA2-204ENST00000578519 THPOP40225 353 aa11.71□□□□□ -0.53
SKA2-204ENST00000578519 PTGIRP43119 386 aa11.71□□□□□ -0.53
SKA2-204ENST00000578519 MARCKSL1P49006 195 aa11.71□□□□□ -0.53
SKA2-204ENST00000578519 CDR1P51861 262 aa11.71□□□□□ -0.53
SKA2-204ENST00000578519 BOLA3Q53S33 107 aa11.71□□□□□ -0.53
SKA2-204ENST00000578519 FAM26DQ5JW98 314 aa11.71□□□□□ -0.53
SKA2-204ENST00000578519 CYP4A22Q5TCH4 519 aa11.71□□□□□ -0.53
SKA2-204ENST00000578519 GDF6Q6KF10 455 aaPredicted RBP11.71□□□□□ -0.53
SKA2-204ENST00000578519 DRICH1Q6PGQ1 229 aaPredicted RBP11.71□□□□□ -0.53
SKA2-204ENST00000578519 MRPL10Q7Z7H8 261 aaKnown RBP11.71□□□□□ -0.53
SKA2-204ENST00000578519 METTL23Q86XA0 190 aa11.71□□□□□ -0.53
SKA2-204ENST00000578519 ARRDC4Q8NCT1 418 aa11.71□□□□□ -0.53
SKA2-204ENST00000578519 SMG8Q8ND04 991 aaKnown RBP11.71□□□□□ -0.53
SKA2-204ENST00000578519 TMEM40Q8WWA1 233 aa11.71□□□□□ -0.53
SKA2-204ENST00000578519 EXOC4Q96A65 974 aa11.71□□□□□ -0.53
SKA2-204ENST00000578519 GLT1D1Q96MS3 346 aa11.71□□□□□ -0.53
SKA2-204ENST00000578519 UROC1Q96N76 676 aa11.71□□□□□ -0.53
SKA2-204ENST00000578519 ZMAT2Q96NC0 199 aaKnown RBP11.71□□□□□ -0.53
SKA2-204ENST00000578519 CPXM1Q96SM3 734 aa11.71□□□□□ -0.53
SKA2-204ENST00000578519 DCLK3Q9C098 648 aa11.71□□□□□ -0.53
SKA2-204ENST00000578519 SENP6Q9GZR1 1112 aaPredicted RBP11.71□□□□□ -0.53
SKA2-204ENST00000578519 DPH5Q9H2P9 285 aa11.71□□□□□ -0.53
SKA2-204ENST00000578519 METTL5Q9NRN9 209 aaKnown RBP11.71□□□□□ -0.53
SKA2-204ENST00000578519 TUBGCP4Q9UGJ1 667 aa11.71□□□□□ -0.53
SKA2-204ENST00000578519 HES2Q9Y543 173 aa11.71□□□□□ -0.53
SKA2-204ENST00000578519 ESYT3A0FGR9 886 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 MYADML2A6NDP7 307 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 RALAP11233 206 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 CTGFP29279 349 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 RFC1P35251 1148 aaPredicted RBP11.7□□□□□ -0.54
SKA2-204ENST00000578519 GJC1P36383 396 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 ZNF143P52747 638 aaPredicted RBP11.7□□□□□ -0.54
SKA2-204ENST00000578519 TAS2R40P59535 323 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 RPL7AP62424 266 aaKnown RBP11.7□□□□□ -0.54
SKA2-204ENST00000578519 MRPS25P82663 173 aaKnown RBP11.7□□□□□ -0.54
SKA2-204ENST00000578519 SLC6A3Q01959 620 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 ITGA7Q13683 1181 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 TFDP2Q14188 446 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 HIC1Q14526 733 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 SOWAHAQ2M3V2 549 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 C2CD6Q53TS8 623 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 EFHC1Q5JVL4 640 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 GLRA4Q5JXX5 417 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 DSTYKQ6XUX3 929 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 SPOCD1Q6ZMY3 1216 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 ARCQ7LC44 396 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 GSTA5Q7RTV2 222 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 TMEM110Q86TL2 294 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 ACOT1Q86TX2 421 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 GSPT2Q8IYD1 628 aaKnown RBP11.7□□□□□ -0.54
SKA2-204ENST00000578519 ADGRF2Q8IZF7 708 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 KCTD6Q8NC69 237 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms