RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 MAGEA11P43364 429 aa28.18■■■□□ 2.1
PPP4R1-204ENST00000577393 LRRC63Q05C16 580 aa28.18■■■□□ 2.1
PPP4R1-204ENST00000577393 MORC3Q14149 939 aa28.18■■■□□ 2.1
PPP4R1-204ENST00000577393 MDH1BQ5I0G3 518 aa28.18■■■□□ 2.1
PPP4R1-204ENST00000577393 STXBP5Q5T5C0 1151 aa28.18■■■□□ 2.1
PPP4R1-204ENST00000577393 SPOPLQ6IQ16 392 aa28.18■■■□□ 2.1
PPP4R1-204ENST00000577393 ZSCAN18Q8TBC5 510 aaPredicted RBP28.18■■■□□ 2.1
PPP4R1-204ENST00000577393 SDCBP2Q9H190 292 aa28.18■■■□□ 2.1
PPP4R1-204ENST00000577393 MFSD1Q9H3U5 465 aa28.18■■■□□ 2.1
PPP4R1-204ENST00000577393 ZNF318Q5VUA4 2279 aa28.17■■■□□ 2.1
PPP4R1-204ENST00000577393 CSH1P0DML2 217 aa28.17■■■□□ 2.1
PPP4R1-204ENST00000577393 CSH2P0DML3 217 aa28.17■■■□□ 2.1
PPP4R1-204ENST00000577393 P4HA1P13674 534 aa28.17■■■□□ 2.1
PPP4R1-204ENST00000577393 PTPN1P18031 435 aaKnown RBP28.17■■■□□ 2.1
PPP4R1-204ENST00000577393 GTF2H1P32780 548 aa28.17■■■□□ 2.1
PPP4R1-204ENST00000577393 PPP1R2P41236 205 aa28.17■■■□□ 2.1
PPP4R1-204ENST00000577393 VCPP55072 806 aaKnown RBP28.17■■■□□ 2.1
PPP4R1-204ENST00000577393 CYP27A1Q02318 531 aa28.17■■■□□ 2.1
PPP4R1-204ENST00000577393 SCN4BQ8IWT1 228 aa28.17■■■□□ 2.1
PPP4R1-204ENST00000577393 TAS1R2Q8TE23 839 aa28.17■■■□□ 2.1
PPP4R1-204ENST00000577393 PCED1BQ96HM7 432 aa28.17■■■□□ 2.1
PPP4R1-204ENST00000577393 TMEM8AQ9HCN3 771 aa28.17■■■□□ 2.1
PPP4R1-204ENST00000577393 UTP3Q9NQZ2 479 aaKnown RBP eCLIP28.17■■■□□ 2.1
PPP4R1-204ENST00000577393 CA14Q9ULX7 337 aa28.17■■■□□ 2.1
PPP4R1-204ENST00000577393 KRBA1A5PL33 1030 aa28.16■■■□□ 2.1
PPP4R1-204ENST00000577393 PPP1R3GB7ZBB8 358 aa28.16■■■□□ 2.1
PPP4R1-204ENST00000577393 SLC16A3O15427 465 aaKnown RBP28.16■■■□□ 2.1
PPP4R1-204ENST00000577393 BDNFP23560 247 aa28.16■■■□□ 2.1
PPP4R1-204ENST00000577393 CDC25CP30307 473 aa28.16■■■□□ 2.1
PPP4R1-204ENST00000577393 GPR158Q5T848 1215 aa28.16■■■□□ 2.1
PPP4R1-204ENST00000577393 KLHL10Q6JEL2 608 aa28.16■■■□□ 2.1
PPP4R1-204ENST00000577393 TRPV4Q9HBA0 871 aa28.16■■■□□ 2.1
PPP4R1-204ENST00000577393 MAGED2Q9UNF1 606 aaPredicted RBP28.16■■■□□ 2.1
PPP4R1-204ENST00000577393 NPR3P17342 541 aa28.15■■■□□ 2.1
PPP4R1-204ENST00000577393 AVPR2P30518 371 aa28.15■■■□□ 2.1
PPP4R1-204ENST00000577393 VIPR2P41587 438 aa28.15■■■□□ 2.1
PPP4R1-204ENST00000577393 CYP4F8P98187 520 aa28.15■■■□□ 2.1
PPP4R1-204ENST00000577393 CAMK4Q16566 473 aa28.15■■■□□ 2.1
PPP4R1-204ENST00000577393 ARHGAP15Q53QZ3 475 aa28.15■■■□□ 2.1
PPP4R1-204ENST00000577393 VSTM1Q6UX27 236 aa28.15■■■□□ 2.1
PPP4R1-204ENST00000577393 B3GALNT2Q8NCR0 500 aa28.15■■■□□ 2.1
PPP4R1-204ENST00000577393 FLCNQ8NFG4 579 aa28.15■■■□□ 2.1
PPP4R1-204ENST00000577393 GCNAQ96QF7 691 aa28.15■■■□□ 2.1
PPP4R1-204ENST00000577393 SLC38A8A6NNN8 435 aa28.14■■■□□ 2.1
PPP4R1-204ENST00000577393 NOL4O94818 638 aa28.14■■■□□ 2.1
PPP4R1-204ENST00000577393 F11P03951 625 aa28.14■■■□□ 2.1
PPP4R1-204ENST00000577393 NLRP12P59046 1061 aa28.14■■■□□ 2.1
PPP4R1-204ENST00000577393 KRT39Q6A163 491 aa28.14■■■□□ 2.1
PPP4R1-204ENST00000577393 IMPG2Q9BZV3 1241 aa28.14■■■□□ 2.1
PPP4R1-204ENST00000577393 APOBEC3GQ9HC16 384 aaKnown RBP28.14■■■□□ 2.1
PPP4R1-204ENST00000577393 STX10O60499 249 aa28.13■■■□□ 2.09
PPP4R1-204ENST00000577393 LRRN2O75325 713 aa28.13■■■□□ 2.09
PPP4R1-204ENST00000577393 GRIK1P39086 918 aa28.13■■■□□ 2.09
PPP4R1-204ENST00000577393 ASPAP45381 313 aa28.13■■■□□ 2.09
PPP4R1-204ENST00000577393 NOP14P78316 857 aaKnown RBP28.13■■■□□ 2.09
PPP4R1-204ENST00000577393 GRM2Q14416 872 aa28.13■■■□□ 2.09
PPP4R1-204ENST00000577393 IER5LQ5T953 404 aa28.13■■■□□ 2.09
PPP4R1-204ENST00000577393 ASTLQ6HA08 431 aaPredicted RBP28.13■■■□□ 2.09
PPP4R1-204ENST00000577393 VITQ6UXI7 678 aa28.13■■■□□ 2.09
PPP4R1-204ENST00000577393 TMEM150AQ86TG1 271 aa28.13■■■□□ 2.09
PPP4R1-204ENST00000577393 NELFBQ8WX92 580 aa28.13■■■□□ 2.09
PPP4R1-204ENST00000577393 TASP1Q9H6P5 420 aa28.13■■■□□ 2.09
PPP4R1-204ENST00000577393 ARHGEF3Q9NR81 526 aa28.13■■■□□ 2.09
PPP4R1-204ENST00000577393 MXI1P50539 228 aa28.12■■■□□ 2.09
PPP4R1-204ENST00000577393 DCAF17Q5H9S7 520 aaPredicted RBP28.12■■■□□ 2.09
PPP4R1-204ENST00000577393 TCERG1LQ5VWI1 586 aa28.12■■■□□ 2.09
PPP4R1-204ENST00000577393 CWF19L1Q69YN2 538 aaKnown RBP28.12■■■□□ 2.09
PPP4R1-204ENST00000577393 TTI2Q6NXR4 508 aa28.12■■■□□ 2.09
PPP4R1-204ENST00000577393 CLEC17AQ6ZS10 378 aa28.12■■■□□ 2.09
PPP4R1-204ENST00000577393 GPIHBP1Q8IV16 184 aa28.12■■■□□ 2.09
PPP4R1-204ENST00000577393 ARID3BQ8IVW6 561 aaPredicted RBP28.12■■■□□ 2.09
PPP4R1-204ENST00000577393 SEMA4DQ92854 862 aa28.12■■■□□ 2.09
PPP4R1-204ENST00000577393 MYRFLQ96LU7 910 aa28.12■■■□□ 2.09
PPP4R1-204ENST00000577393 DUSP9Q99956 384 aaKnown RBP28.12■■■□□ 2.09
PPP4R1-204ENST00000577393 B3GNT5Q9BYG0 378 aa28.12■■■□□ 2.09
PPP4R1-204ENST00000577393 BCO2Q9BYV7 579 aa28.12■■■□□ 2.09
PPP4R1-204ENST00000577393 KIAA1468Q9P260 1216 aa28.12■■■□□ 2.09
PPP4R1-204ENST00000577393 NCANO14594 1321 aa28.12■■■□□ 2.09
PPP4R1-204ENST00000577393 PTPRDP23468 1912 aa28.12■■■□□ 2.09
PPP4R1-204ENST00000577393 HEPACAM2A8MVW5 462 aa28.11■■■□□ 2.09
PPP4R1-204ENST00000577393 CLDN5O00501 218 aa28.11■■■□□ 2.09
PPP4R1-204ENST00000577393 CLCN5P51795 746 aa28.11■■■□□ 2.09
PPP4R1-204ENST00000577393 PFKPQ01813 784 aa28.11■■■□□ 2.09
PPP4R1-204ENST00000577393 E2F7Q96AV8 911 aa28.11■■■□□ 2.09
PPP4R1-204ENST00000577393 RSPRY1Q96DX4 576 aa28.11■■■□□ 2.09
PPP4R1-204ENST00000577393 TRMT2BQ96GJ1 504 aaKnown RBP28.11■■■□□ 2.09
PPP4R1-204ENST00000577393 TNIP3Q96KP6 325 aa28.11■■■□□ 2.09
PPP4R1-204ENST00000577393 SPATA17Q96L03 361 aa28.11■■■□□ 2.09
PPP4R1-204ENST00000577393 CEP63Q96MT8 703 aa28.11■■■□□ 2.09
PPP4R1-204ENST00000577393 TRMT61BQ9BVS5 477 aaKnown RBP28.11■■■□□ 2.09
PPP4R1-204ENST00000577393 SLC46A2Q9BY10 475 aa28.11■■■□□ 2.09
PPP4R1-204ENST00000577393 ZNF518BQ9C0D4 1074 aa28.11■■■□□ 2.09
PPP4R1-204ENST00000577393 UXTQ9UBK9 157 aaPredicted RBP28.11■■■□□ 2.09
PPP4R1-204ENST00000577393 ARMCX3Q9UH62 379 aaPredicted RBP28.11■■■□□ 2.09
PPP4R1-204ENST00000577393 CTNND2Q9UQB3 1225 aa28.11■■■□□ 2.09
PPP4R1-204ENST00000577393 ARIH1Q9Y4X5 557 aaPredicted RBP28.11■■■□□ 2.09
PPP4R1-204ENST00000577393 STK25O00506 426 aa28.1■■■□□ 2.09
PPP4R1-204ENST00000577393 PSMC3P17980 439 aa28.1■■■□□ 2.09
PPP4R1-204ENST00000577393 ANXA13P27216 316 aa28.1■■■□□ 2.09
PPP4R1-204ENST00000577393 NDST1P52848 882 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms