RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-216ENST00000577001 ARFGAP1Q8N6T3 406 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 SPATA18Q8TC71 538 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 CENPTQ96BT3 561 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 B3GNT5Q9BYG0 378 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 HEY2Q9UBP5 337 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 COQ4Q9Y3A0 265 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 HES2Q9Y543 173 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 COL4A5P29400 1685 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 FAM237BA0A1B0GVD1 139 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 M0QYV0 167 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 NOP56O00567 594 aaKnown RBP15.55■□□□□ 0.08
PRPF8-216ENST00000577001 DNALI1O14645 258 aaPredicted RBP15.55■□□□□ 0.08
PRPF8-216ENST00000577001 TJP3O95049 919 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 CYP1A1P04798 512 aaPredicted RBP15.55■□□□□ 0.08
PRPF8-216ENST00000577001 HOXA7P31268 230 aaPredicted RBP15.55■□□□□ 0.08
PRPF8-216ENST00000577001 ATXN3P54252 364 aaPredicted RBP15.55■□□□□ 0.08
PRPF8-216ENST00000577001 EIF3EP60228 445 aaKnown RBP15.55■□□□□ 0.08
PRPF8-216ENST00000577001 GCNT1Q02742 428 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 BNIP1Q12981 228 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 PEX6Q13608 980 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 IL31Q6EBC2 164 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 CASC4Q6P4E1 433 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 FBXO16Q8IX29 292 aaPredicted RBP15.55■□□□□ 0.08
PRPF8-216ENST00000577001 MCPH1Q8NEM0 835 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 CFAP57Q96MR6 1250 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 PDGFCQ9NRA1 345 aa15.55■□□□□ 0.08
PRPF8-216ENST00000577001 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.54■□□□□ 0.08
PRPF8-216ENST00000577001 OATP04181 439 aa15.54■□□□□ 0.08
PRPF8-216ENST00000577001 ITGB3P05106 788 aa15.54■□□□□ 0.08
PRPF8-216ENST00000577001 NFICP08651 508 aa15.54■□□□□ 0.08
PRPF8-216ENST00000577001 SUPT20HL2P0C7V6 817 aa15.54■□□□□ 0.08
PRPF8-216ENST00000577001 KLRC2P26717 231 aa15.54■□□□□ 0.08
PRPF8-216ENST00000577001 SERPINB3P29508 390 aa15.54■□□□□ 0.08
PRPF8-216ENST00000577001 SFNP31947 248 aa15.54■□□□□ 0.08
PRPF8-216ENST00000577001 STAT5BP51692 787 aa15.54■□□□□ 0.08
PRPF8-216ENST00000577001 TTLL12Q14166 644 aaPredicted RBP15.54■□□□□ 0.08
PRPF8-216ENST00000577001 KBTBD12Q3ZCT8 623 aa15.54■□□□□ 0.08
PRPF8-216ENST00000577001 SUPT20HL1Q3ZLR7 823 aa15.54■□□□□ 0.08
PRPF8-216ENST00000577001 ABHD15Q6UXT9 468 aa15.54■□□□□ 0.08
PRPF8-216ENST00000577001 ALYREFQ86V81 257 aaKnown RBP15.54■□□□□ 0.08
PRPF8-216ENST00000577001 ZNF280CQ8ND82 737 aa15.54■□□□□ 0.08
PRPF8-216ENST00000577001 FBXO27Q8NI29 283 aa15.54■□□□□ 0.08
PRPF8-216ENST00000577001 TRPM4Q8TD43 1214 aa15.54■□□□□ 0.08
PRPF8-216ENST00000577001 TMC2Q8TDI7 906 aa15.54■□□□□ 0.08
PRPF8-216ENST00000577001 ZNF75CPQ92670 426 aaPredicted RBP15.54■□□□□ 0.08
PRPF8-216ENST00000577001 USP6NLQ92738 828 aa15.54■□□□□ 0.08
PRPF8-216ENST00000577001 RSRC1Q96IZ7 334 aaKnown RBP15.54■□□□□ 0.08
PRPF8-216ENST00000577001 MRIQ9BWK5 157 aa15.54■□□□□ 0.08
PRPF8-216ENST00000577001 UNKQ9C0B0 810 aaKnown RBP15.54■□□□□ 0.08
PRPF8-216ENST00000577001 ARHGAP28Q9P2N2 729 aa15.54■□□□□ 0.08
PRPF8-216ENST00000577001 ZFP69BQ9UJL9 534 aa15.54■□□□□ 0.08
PRPF8-216ENST00000577001 ZNF214Q9UL59 606 aaPredicted RBP15.54■□□□□ 0.08
PRPF8-216ENST00000577001 CLUHO75153 1309 aa15.54■□□□□ 0.08
PRPF8-216ENST00000577001 ZNFX1Q9P2E3 1918 aaKnown RBP15.54■□□□□ 0.08
PRPF8-216ENST00000577001 VTNP04004 478 aa15.54■□□□□ 0.08
PRPF8-216ENST00000577001 APRTP07741 180 aa15.54■□□□□ 0.08
PRPF8-216ENST00000577001 C16orf46Q6P387 395 aa15.54■□□□□ 0.08
PRPF8-216ENST00000577001 NLRP9Q7RTR0 991 aa15.54■□□□□ 0.08
PRPF8-216ENST00000577001 ARMC9Q7Z3E5 817 aa15.54■□□□□ 0.08
PRPF8-216ENST00000577001 CCDC110Q8TBZ0 833 aa15.54■□□□□ 0.08
PRPF8-216ENST00000577001 WDR83Q9BRX9 315 aaKnown RBP15.54■□□□□ 0.08
PRPF8-216ENST00000577001 TBC1D10AQ9BXI6 508 aa15.54■□□□□ 0.08
PRPF8-216ENST00000577001 TMPRSS4Q9NRS4 437 aa15.54■□□□□ 0.08
PRPF8-216ENST00000577001 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.54■□□□□ 0.08
PRPF8-216ENST00000577001 IKBKGQ9Y6K9 419 aa15.54■□□□□ 0.08
PRPF8-216ENST00000577001 TMEM191CA6NGB0 347 aa15.53■□□□□ 0.08
PRPF8-216ENST00000577001 ARIH2O95376 493 aa15.53■□□□□ 0.08
PRPF8-216ENST00000577001 TFE3P19532 575 aaPredicted RBP15.53■□□□□ 0.08
PRPF8-216ENST00000577001 UBA1P22314 1058 aaKnown RBP15.53■□□□□ 0.08
PRPF8-216ENST00000577001 CCDC6Q16204 474 aa15.53■□□□□ 0.08
PRPF8-216ENST00000577001 XKR3Q5GH77 459 aa15.53■□□□□ 0.08
PRPF8-216ENST00000577001 MROH9Q5TGP6 573 aa15.53■□□□□ 0.08
PRPF8-216ENST00000577001 DSTYKQ6XUX3 929 aa15.53■□□□□ 0.08
PRPF8-216ENST00000577001 SAMD3Q8N6K7 520 aa15.53■□□□□ 0.08
PRPF8-216ENST00000577001 DDX50Q9BQ39 737 aaKnown RBP15.53■□□□□ 0.08
PRPF8-216ENST00000577001 ROPN1BQ9BZX4 212 aaPredicted RBP15.53■□□□□ 0.08
PRPF8-216ENST00000577001 ROPN1Q9HAT0 212 aaPredicted RBP15.53■□□□□ 0.08
PRPF8-216ENST00000577001 RAB6BQ9NRW1 208 aa15.53■□□□□ 0.08
PRPF8-216ENST00000577001 MEI4A8MW99 385 aa15.53■□□□□ 0.08
PRPF8-216ENST00000577001 PTPRAP18433 802 aa15.53■□□□□ 0.08
PRPF8-216ENST00000577001 HADHBP55084 474 aaKnown RBP15.53■□□□□ 0.08
PRPF8-216ENST00000577001 PSMD6Q15008 389 aa15.53■□□□□ 0.08
PRPF8-216ENST00000577001 MTFR1Q15390 333 aa15.53■□□□□ 0.08
PRPF8-216ENST00000577001 CENPUQ71F23 418 aa15.53■□□□□ 0.08
PRPF8-216ENST00000577001 CPT1BQ92523 772 aa15.53■□□□□ 0.08
PRPF8-216ENST00000577001 SERAC1Q96JX3 654 aa15.53■□□□□ 0.08
PRPF8-216ENST00000577001 MAGEB18Q96M61 343 aa15.53■□□□□ 0.08
PRPF8-216ENST00000577001 RXFP1Q9HBX9 757 aa15.53■□□□□ 0.08
PRPF8-216ENST00000577001 ARL8BQ9NVJ2 186 aa15.53■□□□□ 0.08
PRPF8-216ENST00000577001 SEPT10Q9P0V9 454 aa15.53■□□□□ 0.08
PRPF8-216ENST00000577001 CACNG4Q9UBN1 327 aa15.53■□□□□ 0.08
PRPF8-216ENST00000577001 MFHAS1Q9Y4C4 1052 aa15.53■□□□□ 0.08
PRPF8-216ENST00000577001 KBTBD13C9JR72 458 aa15.53■□□□□ 0.08
PRPF8-216ENST00000577001 E5RJQ4 531 aa15.53■□□□□ 0.08
PRPF8-216ENST00000577001 ERBB2P04626 1255 aa15.53■□□□□ 0.08
PRPF8-216ENST00000577001 ATP5DP30049 168 aa15.53■□□□□ 0.08
PRPF8-216ENST00000577001 NR1H3Q13133 447 aa15.53■□□□□ 0.08
PRPF8-216ENST00000577001 CDHR3Q6ZTQ4 885 aa15.53■□□□□ 0.08
PRPF8-216ENST00000577001 FAF2Q96CS3 445 aa15.53■□□□□ 0.08
PRPF8-216ENST00000577001 ZCWPW1Q9H0M4 648 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms