RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 ARID5BQ14865 1188 aa9.07□□□□□ -0.96
PRPF8-213ENST00000576407 MAPRE1Q15691 268 aaKnown RBP9.07□□□□□ -0.96
PRPF8-213ENST00000576407 ASIC2Q16515 512 aa9.07□□□□□ -0.96
PRPF8-213ENST00000576407 NFE2Q16621 373 aaPredicted RBP9.07□□□□□ -0.96
PRPF8-213ENST00000576407 PTPROQ16827 1216 aa9.07□□□□□ -0.96
PRPF8-213ENST00000576407 SGO2Q562F6 1265 aa9.07□□□□□ -0.96
PRPF8-213ENST00000576407 PPP1R26Q5T8A7 1209 aaPredicted RBP9.07□□□□□ -0.96
PRPF8-213ENST00000576407 RNF19BQ6ZMZ0 732 aa9.07□□□□□ -0.96
PRPF8-213ENST00000576407 IRF2BP2Q7Z5L9 587 aa9.07□□□□□ -0.96
PRPF8-213ENST00000576407 SLC47A2Q86VL8 602 aa9.07□□□□□ -0.96
PRPF8-213ENST00000576407 CNGA4Q8IV77 575 aa9.07□□□□□ -0.96
PRPF8-213ENST00000576407 FMNL3Q8IVF7 1028 aa9.07□□□□□ -0.96
PRPF8-213ENST00000576407 FUKQ8N0W3 1084 aa9.07□□□□□ -0.96
PRPF8-213ENST00000576407 TC2NQ8N9U0 490 aa9.07□□□□□ -0.96
PRPF8-213ENST00000576407 OR8K1Q8NGG5 319 aa9.07□□□□□ -0.96
PRPF8-213ENST00000576407 ZNF461Q8TAF7 563 aa9.07□□□□□ -0.96
PRPF8-213ENST00000576407 ZNF606Q8WXB4 792 aa9.07□□□□□ -0.96
PRPF8-213ENST00000576407 SYN2Q92777 582 aaPredicted RBP9.07□□□□□ -0.96
PRPF8-213ENST00000576407 MYLPFQ96A32 169 aa9.07□□□□□ -0.96
PRPF8-213ENST00000576407 CYFIP2Q96F07 1278 aa9.07□□□□□ -0.96
PRPF8-213ENST00000576407 PCED1BQ96HM7 432 aa9.07□□□□□ -0.96
PRPF8-213ENST00000576407 PGLYRP2Q96PD5 576 aa9.07□□□□□ -0.96
PRPF8-213ENST00000576407 ZSWIM1Q9BR11 485 aa9.07□□□□□ -0.96
PRPF8-213ENST00000576407 B3GNT5Q9BYG0 378 aa9.07□□□□□ -0.96
PRPF8-213ENST00000576407 ABHD10Q9NUJ1 306 aa9.07□□□□□ -0.96
PRPF8-213ENST00000576407 NOCTQ9UK39 431 aaKnown RBP9.07□□□□□ -0.96
PRPF8-213ENST00000576407 KIAA1257Q9ULG3 409 aa9.07□□□□□ -0.96
PRPF8-213ENST00000576407 ATG2AQ2TAZ0 1938 aa9.06□□□□□ -0.96
PRPF8-213ENST00000576407 MTMR11A4FU01 709 aa9.06□□□□□ -0.96
PRPF8-213ENST00000576407 O00370 1275 aa9.06□□□□□ -0.96
PRPF8-213ENST00000576407 CLDN5O00501 218 aa9.06□□□□□ -0.96
PRPF8-213ENST00000576407 PER2O15055 1255 aa9.06□□□□□ -0.96
PRPF8-213ENST00000576407 THAP12O43422 761 aa9.06□□□□□ -0.96
PRPF8-213ENST00000576407 ABLIM3O94929 683 aa9.06□□□□□ -0.96
PRPF8-213ENST00000576407 VNN2O95498 520 aa9.06□□□□□ -0.96
PRPF8-213ENST00000576407 SKILP12757 684 aa9.06□□□□□ -0.96
PRPF8-213ENST00000576407 ATF2P15336 505 aa9.06□□□□□ -0.96
PRPF8-213ENST00000576407 KLRC2P26717 231 aa9.06□□□□□ -0.96
PRPF8-213ENST00000576407 ADORA2BP29275 332 aa9.06□□□□□ -0.96
PRPF8-213ENST00000576407 HNRNPH3P31942 346 aaKnown RBP9.06□□□□□ -0.96
PRPF8-213ENST00000576407 PRKCIP41743 596 aa9.06□□□□□ -0.96
PRPF8-213ENST00000576407 PDE6CP51160 858 aa9.06□□□□□ -0.96
PRPF8-213ENST00000576407 SMARCB1Q12824 385 aa9.06□□□□□ -0.96
PRPF8-213ENST00000576407 TSR1Q2NL82 804 aaKnown RBP9.06□□□□□ -0.96
PRPF8-213ENST00000576407 TPGS2Q68CL5 300 aa9.06□□□□□ -0.96
PRPF8-213ENST00000576407 ARHGAP17Q68EM7 881 aa9.06□□□□□ -0.96
PRPF8-213ENST00000576407 C4orf50Q6ZRC1 276 aa9.06□□□□□ -0.96
PRPF8-213ENST00000576407 PAQR9Q6ZVX9 377 aa9.06□□□□□ -0.96
PRPF8-213ENST00000576407 ADGRD2Q7Z7M1 963 aa9.06□□□□□ -0.96
PRPF8-213ENST00000576407 RBM23Q86U06 439 aaKnown RBP9.06□□□□□ -0.96
PRPF8-213ENST00000576407 NOP9Q86U38 636 aaKnown RBP9.06□□□□□ -0.96
PRPF8-213ENST00000576407 PALB2Q86YC2 1186 aa9.06□□□□□ -0.96
PRPF8-213ENST00000576407 SPATA2LQ8IUW3 424 aaPredicted RBP9.06□□□□□ -0.96
PRPF8-213ENST00000576407 ATAD1Q8NBU5 361 aa9.06□□□□□ -0.96
PRPF8-213ENST00000576407 SLC2A14Q8TDB8 520 aa9.06□□□□□ -0.96
PRPF8-213ENST00000576407 EPS8L1Q8TE68 723 aa9.06□□□□□ -0.96
PRPF8-213ENST00000576407 SLC20A1Q8WUM9 679 aa9.06□□□□□ -0.96
PRPF8-213ENST00000576407 DDX1Q92499 740 aaKnown RBP9.06□□□□□ -0.96
PRPF8-213ENST00000576407 FAM161BQ96MY7 647 aa9.06□□□□□ -0.96
PRPF8-213ENST00000576407 HNRNPABQ99729 332 aaKnown RBP9.06□□□□□ -0.96
PRPF8-213ENST00000576407 RHOBTB2Q9BYZ6 727 aa9.06□□□□□ -0.96
PRPF8-213ENST00000576407 ABI2Q9NYB9 513 aaPredicted RBP9.06□□□□□ -0.96
PRPF8-213ENST00000576407 AFF4Q9UHB7 1163 aaKnown RBP9.06□□□□□ -0.96
PRPF8-213ENST00000576407 PCDHB5Q9Y5E4 795 aa9.06□□□□□ -0.96
PRPF8-213ENST00000576407 GOLGA6L6A8MZA4 724 aa9.05□□□□□ -0.96
PRPF8-213ENST00000576407 MED7O43513 233 aa9.05□□□□□ -0.96
PRPF8-213ENST00000576407 TGM5O43548 720 aa9.05□□□□□ -0.96
PRPF8-213ENST00000576407 CLASP2O75122 1294 aaKnown RBP9.05□□□□□ -0.96
PRPF8-213ENST00000576407 SERPING1P05155 500 aa9.05□□□□□ -0.96
PRPF8-213ENST00000576407 CFHP08603 1231 aa9.05□□□□□ -0.96
PRPF8-213ENST00000576407 SPATA31D3P0C874 917 aa9.05□□□□□ -0.96
PRPF8-213ENST00000576407 BDNFP23560 247 aa9.05□□□□□ -0.96
PRPF8-213ENST00000576407 CYP2F1P24903 491 aa9.05□□□□□ -0.96
PRPF8-213ENST00000576407 SSTR3P32745 418 aaPredicted RBP9.05□□□□□ -0.96
PRPF8-213ENST00000576407 CLCN4P51793 760 aa9.05□□□□□ -0.96
PRPF8-213ENST00000576407 CDR2Q01850 454 aa9.05□□□□□ -0.96
PRPF8-213ENST00000576407 ADCY1Q08828 1119 aa9.05□□□□□ -0.96
PRPF8-213ENST00000576407 KLHL30Q0D2K2 578 aa9.05□□□□□ -0.96
PRPF8-213ENST00000576407 ADGRE1Q14246 886 aa9.05□□□□□ -0.96
PRPF8-213ENST00000576407 STILQ15468 1287 aa9.05□□□□□ -0.96
PRPF8-213ENST00000576407 CNGA2Q16280 664 aa9.05□□□□□ -0.96
PRPF8-213ENST00000576407 GOLGA7BQ2TAP0 167 aa9.05□□□□□ -0.96
PRPF8-213ENST00000576407 CFAP221Q4G0U5 840 aa9.05□□□□□ -0.96
PRPF8-213ENST00000576407 HGSNATQ68CP4 663 aa9.05□□□□□ -0.96
PRPF8-213ENST00000576407 GPR153Q6NV75 609 aa9.05□□□□□ -0.96
PRPF8-213ENST00000576407 LILRA6Q6PI73 481 aa9.05□□□□□ -0.96
PRPF8-213ENST00000576407 WDR59Q6PJI9 974 aa9.05□□□□□ -0.96
PRPF8-213ENST00000576407 LCLAT1Q6UWP7 414 aa9.05□□□□□ -0.96
PRPF8-213ENST00000576407 SPATA31D4Q6ZUB0 917 aa9.05□□□□□ -0.96
PRPF8-213ENST00000576407 FAM35AQ86V20 835 aa9.05□□□□□ -0.96
PRPF8-213ENST00000576407 TTC9BQ8N6N2 239 aa9.05□□□□□ -0.96
PRPF8-213ENST00000576407 SPPL2BQ8TCT7 592 aa9.05□□□□□ -0.96
PRPF8-213ENST00000576407 C2orf15Q8WU43 125 aaKnown RBP9.05□□□□□ -0.96
PRPF8-213ENST00000576407 FUBP3Q96I24 572 aaKnown RBP eCLIP9.05□□□□□ -0.96
PRPF8-213ENST00000576407 SYT11Q9BT88 431 aa9.05□□□□□ -0.96
PRPF8-213ENST00000576407 MED10Q9BTT4 135 aa9.05□□□□□ -0.96
PRPF8-213ENST00000576407 ZNF518BQ9C0D4 1074 aa9.05□□□□□ -0.96
PRPF8-213ENST00000576407 CRISPLD1Q9H336 500 aa9.05□□□□□ -0.96
PRPF8-213ENST00000576407 NSUN3Q9H649 340 aaKnown RBP9.05□□□□□ -0.96
PRPF8-213ENST00000576407 HAUS4Q9H6D7 363 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms