RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 SP9P0CG40 484 aa12.73□□□□□ -0.37
LITAF-219ENST00000576334 BDNFP23560 247 aa12.73□□□□□ -0.37
LITAF-219ENST00000576334 CCNE1P24864 410 aa12.73□□□□□ -0.37
LITAF-219ENST00000576334 LHX1P48742 406 aa12.73□□□□□ -0.37
LITAF-219ENST00000576334 CACNA2D1P54289 1103 aa12.73□□□□□ -0.37
LITAF-219ENST00000576334 CDH8P55286 799 aa12.73□□□□□ -0.37
LITAF-219ENST00000576334 DPYDQ12882 1025 aa12.73□□□□□ -0.37
LITAF-219ENST00000576334 NFE2Q16621 373 aaPredicted RBP12.73□□□□□ -0.37
LITAF-219ENST00000576334 WDR72Q3MJ13 1102 aa12.73□□□□□ -0.37
LITAF-219ENST00000576334 TDRD10Q5VZ19 366 aaKnown RBP12.73□□□□□ -0.37
LITAF-219ENST00000576334 TXNDC11Q6PKC3 985 aa12.73□□□□□ -0.37
LITAF-219ENST00000576334 ZNF852Q6ZMS4 543 aa12.73□□□□□ -0.37
LITAF-219ENST00000576334 SPATA2LQ8IUW3 424 aaPredicted RBP12.73□□□□□ -0.37
LITAF-219ENST00000576334 PARD3BQ8TEW8 1205 aa12.73□□□□□ -0.37
LITAF-219ENST00000576334 DEPDC1BQ8WUY9 529 aa12.73□□□□□ -0.37
LITAF-219ENST00000576334 DNASE1L2Q92874 299 aa12.73□□□□□ -0.37
LITAF-219ENST00000576334 CYP2S1Q96SQ9 504 aa12.73□□□□□ -0.37
LITAF-219ENST00000576334 GPR88Q9GZN0 384 aa12.73□□□□□ -0.37
LITAF-219ENST00000576334 XYLT2Q9H1B5 865 aa12.73□□□□□ -0.37
LITAF-219ENST00000576334 IRF2BPLQ9H1B7 796 aa12.73□□□□□ -0.37
LITAF-219ENST00000576334 RBM12Q9NTZ6 932 aaKnown RBP12.73□□□□□ -0.37
LITAF-219ENST00000576334 NXF1Q9UBU9 619 aaKnown RBP12.73□□□□□ -0.37
LITAF-219ENST00000576334 R3HCC1Q9Y3T6 440 aaKnown RBP12.73□□□□□ -0.37
LITAF-219ENST00000576334 DMXL1Q9Y485 3027 aa12.72□□□□□ -0.37
LITAF-219ENST00000576334 FAM237AA0A1B0GTK4 181 aa12.72□□□□□ -0.37
LITAF-219ENST00000576334 CLDN5O00501 218 aa12.72□□□□□ -0.37
LITAF-219ENST00000576334 DPYSL4O14531 572 aa12.72□□□□□ -0.37
LITAF-219ENST00000576334 VNN1O95497 513 aa12.72□□□□□ -0.37
LITAF-219ENST00000576334 NR3C1P04150 777 aa12.72□□□□□ -0.37
LITAF-219ENST00000576334 WARSP23381 471 aaKnown RBP12.72□□□□□ -0.37
LITAF-219ENST00000576334 CDC25CP30307 473 aa12.72□□□□□ -0.37
LITAF-219ENST00000576334 USP46P62068 366 aa12.72□□□□□ -0.37
LITAF-219ENST00000576334 CYP27A1Q02318 531 aa12.72□□□□□ -0.37
LITAF-219ENST00000576334 FCHO2Q0JRZ9 810 aa12.72□□□□□ -0.37
LITAF-219ENST00000576334 SMARCB1Q12824 385 aa12.72□□□□□ -0.37
LITAF-219ENST00000576334 MTAPQ13126 283 aa12.72□□□□□ -0.37
LITAF-219ENST00000576334 GAS6Q14393 721 aa12.72□□□□□ -0.37
LITAF-219ENST00000576334 ARHGAP15Q53QZ3 475 aa12.72□□□□□ -0.37
LITAF-219ENST00000576334 MDH1BQ5I0G3 518 aa12.72□□□□□ -0.37
LITAF-219ENST00000576334 C1orf220Q5T0J3 134 aa12.72□□□□□ -0.37
LITAF-219ENST00000576334 TRIM68Q6AZZ1 485 aa12.72□□□□□ -0.37
LITAF-219ENST00000576334 SCARA5Q6ZMJ2 495 aa12.72□□□□□ -0.37
LITAF-219ENST00000576334 KRBA2Q6ZNG9 492 aa12.72□□□□□ -0.37
LITAF-219ENST00000576334 YAF2Q8IY57 180 aa12.72□□□□□ -0.37
LITAF-219ENST00000576334 SMYD4Q8IYR2 804 aaPredicted RBP12.72□□□□□ -0.37
LITAF-219ENST00000576334 CMTM8Q8IZV2 173 aa12.72□□□□□ -0.37
LITAF-219ENST00000576334 TTC16Q8NEE8 873 aa12.72□□□□□ -0.37
LITAF-219ENST00000576334 OR6B3Q8NGW1 331 aa12.72□□□□□ -0.37
LITAF-219ENST00000576334 FAM3CQ92520 227 aa12.72□□□□□ -0.37
LITAF-219ENST00000576334 ERCC4Q92889 916 aaPredicted RBP12.72□□□□□ -0.37
LITAF-219ENST00000576334 USP13Q92995 863 aaPredicted RBP12.72□□□□□ -0.37
LITAF-219ENST00000576334 CLDN23Q96B33 292 aa12.72□□□□□ -0.37
LITAF-219ENST00000576334 EEF2KMTQ96G04 330 aa12.72□□□□□ -0.37
LITAF-219ENST00000576334 PCED1BQ96HM7 432 aa12.72□□□□□ -0.37
LITAF-219ENST00000576334 BCO2Q9BYV7 579 aa12.72□□□□□ -0.37
LITAF-219ENST00000576334 SDCBP2Q9H190 292 aa12.72□□□□□ -0.37
LITAF-219ENST00000576334 SMYD3Q9H7B4 428 aa12.72□□□□□ -0.37
LITAF-219ENST00000576334 FANCMQ8IYD8 2048 aa12.71□□□□□ -0.37
LITAF-219ENST00000576334 C2orf78A6NCI8 922 aa12.71□□□□□ -0.37
LITAF-219ENST00000576334 OTOL1A6NHN0 477 aaPredicted RBP12.71□□□□□ -0.37
LITAF-219ENST00000576334 CHADO15335 359 aa12.71□□□□□ -0.37
LITAF-219ENST00000576334 PHACTR2O75167 634 aa12.71□□□□□ -0.37
LITAF-219ENST00000576334 NOL4O94818 638 aa12.71□□□□□ -0.37
LITAF-219ENST00000576334 ZNF202O95125 648 aa12.71□□□□□ -0.37
LITAF-219ENST00000576334 C4BPAP04003 597 aaKnown RBP12.71□□□□□ -0.37
LITAF-219ENST00000576334 CSH1P0DML2 217 aa12.71□□□□□ -0.37
LITAF-219ENST00000576334 CSH2P0DML3 217 aa12.71□□□□□ -0.37
LITAF-219ENST00000576334 PCSK1P29120 753 aa12.71□□□□□ -0.37
LITAF-219ENST00000576334 GNL1P36915 607 aaPredicted RBP12.71□□□□□ -0.37
LITAF-219ENST00000576334 SNRPFP62306 86 aaKnown RBP12.71□□□□□ -0.37
LITAF-219ENST00000576334 CSTF1Q05048 431 aaKnown RBP12.71□□□□□ -0.37
LITAF-219ENST00000576334 PSMD2Q13200 908 aa12.71□□□□□ -0.37
LITAF-219ENST00000576334 ORC1Q13415 861 aa12.71□□□□□ -0.37
LITAF-219ENST00000576334 BIRC3Q13489 604 aa12.71□□□□□ -0.37
LITAF-219ENST00000576334 TRPC3Q13507 836 aa12.71□□□□□ -0.37
LITAF-219ENST00000576334 CFAP221Q4G0U5 840 aa12.71□□□□□ -0.37
LITAF-219ENST00000576334 CEP135Q66GS9 1140 aa12.71□□□□□ -0.37
LITAF-219ENST00000576334 NAIF1Q69YI7 327 aaPredicted RBP12.71□□□□□ -0.37
LITAF-219ENST00000576334 SPOPLQ6IQ16 392 aa12.71□□□□□ -0.37
LITAF-219ENST00000576334 DPH6Q7L8W6 267 aa12.71□□□□□ -0.37
LITAF-219ENST00000576334 BPIFB1Q8TDL5 484 aa12.71□□□□□ -0.37
LITAF-219ENST00000576334 CSGALNACT1Q8TDX6 532 aa12.71□□□□□ -0.37
LITAF-219ENST00000576334 NKD2Q969F2 451 aaPredicted RBP12.71□□□□□ -0.37
LITAF-219ENST00000576334 GCNAQ96QF7 691 aa12.71□□□□□ -0.37
LITAF-219ENST00000576334 SNX25Q9H3E2 840 aa12.71□□□□□ -0.37
LITAF-219ENST00000576334 LMAN1LQ9HAT1 526 aa12.71□□□□□ -0.37
LITAF-219ENST00000576334 TRPC7Q9HCX4 862 aa12.71□□□□□ -0.37
LITAF-219ENST00000576334 ABCB6Q9NP58 842 aa12.71□□□□□ -0.37
LITAF-219ENST00000576334 C2orf42Q9NWW7 574 aa12.71□□□□□ -0.37
LITAF-219ENST00000576334 MAGEC2Q9UBF1 373 aaPredicted RBP12.71□□□□□ -0.37
LITAF-219ENST00000576334 CDH9Q9ULB4 789 aa12.71□□□□□ -0.37
LITAF-219ENST00000576334 RIF1Q5UIP0 2472 aaKnown RBP12.7□□□□□ -0.38
LITAF-219ENST00000576334 DCHS1Q96JQ0 3298 aa12.7□□□□□ -0.38
LITAF-219ENST00000576334 A0A1W2PQ27 194 aa12.7□□□□□ -0.38
LITAF-219ENST00000576334 A0A1W2PQ64 194 aa12.7□□□□□ -0.38
LITAF-219ENST00000576334 A0A1W2PQD8 194 aa12.7□□□□□ -0.38
LITAF-219ENST00000576334 PDXKO00764 312 aa12.7□□□□□ -0.38
LITAF-219ENST00000576334 LAMTOR5O43504 91 aa12.7□□□□□ -0.38
LITAF-219ENST00000576334 RHOBTB3O94955 611 aa12.7□□□□□ -0.38
LITAF-219ENST00000576334 CLSTN1O94985 981 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms