RNA–Protein interactions for RNA: ENST00000576036.5

LITAF-218, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LITAF, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-218ENST00000576036 SHC3Q92529 594 aa16.67■□□□□ 0.26
LITAF-218ENST00000576036 HLA-CQ95604 372 aa16.67■□□□□ 0.26
LITAF-218ENST00000576036 NT5C1AQ9BXI3 368 aa16.67■□□□□ 0.26
LITAF-218ENST00000576036 ZNF518BQ9C0D4 1074 aa16.67■□□□□ 0.26
LITAF-218ENST00000576036 SFXN1Q9H9B4 322 aa16.67■□□□□ 0.26
LITAF-218ENST00000576036 ABCB6Q9NP58 842 aa16.67■□□□□ 0.26
LITAF-218ENST00000576036 FAM49BQ9NUQ9 324 aa16.67■□□□□ 0.26
LITAF-218ENST00000576036 ABI2Q9NYB9 513 aaPredicted RBP16.67■□□□□ 0.26
LITAF-218ENST00000576036 DNAJC12Q9UKB3 198 aa16.67■□□□□ 0.26
LITAF-218ENST00000576036 PCDHB5Q9Y5E4 795 aa16.67■□□□□ 0.26
LITAF-218ENST00000576036 NRG2O14511 850 aaPredicted RBP16.66■□□□□ 0.26
LITAF-218ENST00000576036 TPM2P07951 284 aa16.66■□□□□ 0.26
LITAF-218ENST00000576036 UCHL3P15374 230 aa16.66■□□□□ 0.26
LITAF-218ENST00000576036 SMARCB1Q12824 385 aa16.66■□□□□ 0.26
LITAF-218ENST00000576036 NFE2Q16621 373 aaPredicted RBP16.66■□□□□ 0.26
LITAF-218ENST00000576036 UVSSAQ2YD98 709 aa16.66■□□□□ 0.26
LITAF-218ENST00000576036 TMEM270Q6UE05 265 aa16.66■□□□□ 0.26
LITAF-218ENST00000576036 TMC5Q6UXY8 1006 aa16.66■□□□□ 0.26
LITAF-218ENST00000576036 FAM35AQ86V20 835 aa16.66■□□□□ 0.26
LITAF-218ENST00000576036 RBBP8NLQ8NC74 664 aaPredicted RBP16.66■□□□□ 0.26
LITAF-218ENST00000576036 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.66■□□□□ 0.26
LITAF-218ENST00000576036 SPPL2BQ8TCT7 592 aa16.66■□□□□ 0.26
LITAF-218ENST00000576036 TFAP2BQ92481 460 aa16.66■□□□□ 0.26
LITAF-218ENST00000576036 SUSD6Q92537 303 aa16.66■□□□□ 0.26
LITAF-218ENST00000576036 JAKMIP2Q96AA8 810 aa16.66■□□□□ 0.26
LITAF-218ENST00000576036 TMEM176AQ96HP8 235 aa16.66■□□□□ 0.26
LITAF-218ENST00000576036 TNIP3Q96KP6 325 aa16.66■□□□□ 0.26
LITAF-218ENST00000576036 ZDHHC7Q9NXF8 308 aa16.66■□□□□ 0.26
LITAF-218ENST00000576036 CEP72Q9P209 647 aa16.66■□□□□ 0.26
LITAF-218ENST00000576036 HSFX1Q9UBD0 423 aa16.66■□□□□ 0.26
LITAF-218ENST00000576036 CD207Q9UJ71 328 aa16.66■□□□□ 0.26
LITAF-218ENST00000576036 COG5Q9UP83 839 aa16.66■□□□□ 0.26
LITAF-218ENST00000576036 PCDHB4Q9Y5E5 795 aa16.66■□□□□ 0.26
LITAF-218ENST00000576036 CCDC195A0A1B0GUA6 201 aa16.65■□□□□ 0.26
LITAF-218ENST00000576036 PRRG1O14668 218 aa16.65■□□□□ 0.26
LITAF-218ENST00000576036 CCL16O15467 120 aa16.65■□□□□ 0.26
LITAF-218ENST00000576036 SERPINC1P01008 464 aa16.65■□□□□ 0.26
LITAF-218ENST00000576036 POU2F2P09086 479 aa16.65■□□□□ 0.26
LITAF-218ENST00000576036 HOXB8P17481 243 aaPredicted RBP16.65■□□□□ 0.26
LITAF-218ENST00000576036 BDNFP23560 247 aa16.65■□□□□ 0.26
LITAF-218ENST00000576036 MAGEA11P43364 429 aa16.65■□□□□ 0.26
LITAF-218ENST00000576036 YWHAEP62258 255 aaKnown RBP16.65■□□□□ 0.26
LITAF-218ENST00000576036 TPM4P67936 248 aa16.65■□□□□ 0.26
LITAF-218ENST00000576036 CYP27A1Q02318 531 aa16.65■□□□□ 0.26
LITAF-218ENST00000576036 TWF1Q12792 350 aa16.65■□□□□ 0.26
LITAF-218ENST00000576036 ARHGAP44Q17R89 818 aa16.65■□□□□ 0.26
LITAF-218ENST00000576036 LEXMQ3ZCV2 418 aa16.65■□□□□ 0.26
LITAF-218ENST00000576036 PPM1LQ5SGD2 360 aa16.65■□□□□ 0.26
LITAF-218ENST00000576036 LIN9Q5TKA1 542 aa16.65■□□□□ 0.26
LITAF-218ENST00000576036 SDHAF4Q5VUM1 108 aa16.65■□□□□ 0.26
LITAF-218ENST00000576036 CCDC149Q6ZUS6 474 aa16.65■□□□□ 0.26
LITAF-218ENST00000576036 ENOSF1Q7L5Y1 443 aa16.65■□□□□ 0.26
LITAF-218ENST00000576036 GPR149Q86SP6 731 aa16.65■□□□□ 0.26
LITAF-218ENST00000576036 TTC39CQ8N584 583 aa16.65■□□□□ 0.26
LITAF-218ENST00000576036 STKLD1Q8NE28 680 aa16.65■□□□□ 0.26
LITAF-218ENST00000576036 ZMIZ2Q8NF64 920 aa16.65■□□□□ 0.26
LITAF-218ENST00000576036 FUBP3Q96I24 572 aaKnown RBP eCLIP16.65■□□□□ 0.26
LITAF-218ENST00000576036 PRKD2Q9BZL6 878 aa16.65■□□□□ 0.26
LITAF-218ENST00000576036 ADAM7Q9H2U9 754 aa16.65■□□□□ 0.26
LITAF-218ENST00000576036 ACP6Q9NPH0 428 aa16.65■□□□□ 0.26
LITAF-218ENST00000576036 FAM207AQ9NSI2 230 aaPredicted RBP16.65■□□□□ 0.26
LITAF-218ENST00000576036 IFNKQ9P0W0 207 aa16.65■□□□□ 0.26
LITAF-218ENST00000576036 SPTBN5Q9NRC6 3674 aaKnown RBP16.65■□□□□ 0.26
LITAF-218ENST00000576036 A0A1W2PQC6 194 aa16.64■□□□□ 0.25
LITAF-218ENST00000576036 FOXN3O00409 490 aaPredicted RBP16.64■□□□□ 0.25
LITAF-218ENST00000576036 MBTPS2O43462 519 aa16.64■□□□□ 0.25
LITAF-218ENST00000576036 BEST1O76090 585 aa16.64■□□□□ 0.25
LITAF-218ENST00000576036 HNRNPA1P09651 372 aaKnown RBP eCLIP16.64■□□□□ 0.25
LITAF-218ENST00000576036 SRGAP2BP0DMP2 458 aa16.64■□□□□ 0.25
LITAF-218ENST00000576036 ELF1P32519 619 aa16.64■□□□□ 0.25
LITAF-218ENST00000576036 MFAP3P55082 362 aa16.64■□□□□ 0.25
LITAF-218ENST00000576036 UBASH3AP57075 661 aa16.64■□□□□ 0.25
LITAF-218ENST00000576036 JAM2P57087 298 aa16.64■□□□□ 0.25
LITAF-218ENST00000576036 DRAP1Q14919 205 aaPredicted RBP16.64■□□□□ 0.25
LITAF-218ENST00000576036 MAPRE1Q15691 268 aaKnown RBP16.64■□□□□ 0.25
LITAF-218ENST00000576036 PPP1R26Q5T8A7 1209 aaPredicted RBP16.64■□□□□ 0.25
LITAF-218ENST00000576036 ARHGAP17Q68EM7 881 aa16.64■□□□□ 0.25
LITAF-218ENST00000576036 C4orf50Q6ZRC1 276 aa16.64■□□□□ 0.25
LITAF-218ENST00000576036 RTL10Q7L3V2 364 aa16.64■□□□□ 0.25
LITAF-218ENST00000576036 SPATA2LQ8IUW3 424 aaPredicted RBP16.64■□□□□ 0.25
LITAF-218ENST00000576036 SLC2A14Q8TDB8 520 aa16.64■□□□□ 0.25
LITAF-218ENST00000576036 SEPT5Q99719 369 aaPredicted RBP16.64■□□□□ 0.25
LITAF-218ENST00000576036 HNRNPABQ99729 332 aaKnown RBP16.64■□□□□ 0.25
LITAF-218ENST00000576036 LRRC3Q9BY71 257 aa16.64■□□□□ 0.25
LITAF-218ENST00000576036 XPO4Q9C0E2 1151 aaKnown RBP16.64■□□□□ 0.25
LITAF-218ENST00000576036 HCFC1R1Q9NWW0 138 aa16.64■□□□□ 0.25
LITAF-218ENST00000576036 USP15Q9Y4E8 981 aaPredicted RBP16.64■□□□□ 0.25
LITAF-218ENST00000576036 O00370 1275 aa16.63■□□□□ 0.25
LITAF-218ENST00000576036 PAEPP09466 180 aa16.63■□□□□ 0.25
LITAF-218ENST00000576036 POLR2FP61218 127 aaKnown RBP16.63■□□□□ 0.25
LITAF-218ENST00000576036 NTHL1P78549 312 aa16.63■□□□□ 0.25
LITAF-218ENST00000576036 SMAD4Q13485 552 aaKnown RBP16.63■□□□□ 0.25
LITAF-218ENST00000576036 DDR2Q16832 855 aa16.63■□□□□ 0.25
LITAF-218ENST00000576036 MGAT5BQ3V5L5 792 aa16.63■□□□□ 0.25
LITAF-218ENST00000576036 FAM71AQ8IYT1 594 aa16.63■□□□□ 0.25
LITAF-218ENST00000576036 GPR152Q8TDT2 470 aa16.63■□□□□ 0.25
LITAF-218ENST00000576036 SMG7Q92540 1137 aaKnown RBP16.63■□□□□ 0.25
LITAF-218ENST00000576036 CYFIP2Q96F07 1278 aa16.63■□□□□ 0.25
LITAF-218ENST00000576036 FAM81BQ96LP2 452 aa16.63■□□□□ 0.25
LITAF-218ENST00000576036 SMOQ99835 787 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms