RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 MGAT5BQ3V5L5 792 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 LIN9Q5TKA1 542 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 PHLDB3Q6NSJ2 640 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 DPY19L2P1Q6NXN4 242 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 PDXDC1Q6P996 788 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 GPR149Q86SP6 731 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 PPFIBP1Q86W92 1011 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 TMC8Q8IU68 726 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 THEM5Q8N1Q8 247 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 TMEM86AQ8N2M4 240 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 B3GALNT2Q8NCR0 500 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 ZNF461Q8TAF7 563 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 ADAMTS19Q8TE59 1207 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 JAKMIP2Q96AA8 810 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 RPGRIP1Q96KN7 1286 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 MYADMQ96S97 322 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 ZSWIM1Q9BR11 485 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 TUBGCP2Q9BSJ2 902 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 B3GNT5Q9BYG0 378 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 KCNF1Q9H3M0 494 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 METTL14Q9HCE5 456 aaKnown RBP8.43□□□□□ -1.06
CCDC40-215ENST00000576033 CISHQ9NSE2 258 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 DZANK1Q9NVP4 752 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 DNMT3BQ9UBC3 853 aaKnown RBP8.43□□□□□ -1.06
CCDC40-215ENST00000576033 STK39Q9UEW8 545 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 AFF4Q9UHB7 1163 aaKnown RBP8.43□□□□□ -1.06
CCDC40-215ENST00000576033 DSEQ9UL01 958 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 R3HCC1Q9Y3T6 440 aaKnown RBP8.43□□□□□ -1.06
CCDC40-215ENST00000576033 CLUHO75153 1309 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 NUP210Q8TEM1 1887 aaPredicted RBP8.43□□□□□ -1.06
CCDC40-215ENST00000576033 HELZP42694 1942 aaKnown RBP8.42□□□□□ -1.06
CCDC40-215ENST00000576033 ARHGEF37A1IGU5 675 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 GOLGA6L6A8MZA4 724 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 TULP2O00295 520 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 PES1O00541 588 aaKnown RBP8.42□□□□□ -1.06
CCDC40-215ENST00000576033 CILPO75339 1184 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 MOSPD3O75425 235 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 TADA3O75528 432 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 GNA14O95837 355 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 CFHP08603 1231 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 HAPLN1P10915 354 aaPredicted RBP8.42□□□□□ -1.06
CCDC40-215ENST00000576033 PTPN1P18031 435 aaKnown RBP8.42□□□□□ -1.06
CCDC40-215ENST00000576033 ACO1P21399 889 aaKnown RBP8.42□□□□□ -1.06
CCDC40-215ENST00000576033 ADORA2BP29275 332 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 CLCN1P35523 988 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 COPB1P53618 953 aaKnown RBP8.42□□□□□ -1.06
CCDC40-215ENST00000576033 RAD23BP54727 409 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 TPM4P67936 248 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 CYP4F8P98187 520 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 TSPY1Q01534 308 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 ZP2Q05996 745 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 ENPEPQ07075 957 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 INCA1Q0VD86 236 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 IFRD2Q12894 506 aaPredicted RBP8.42□□□□□ -1.06
CCDC40-215ENST00000576033 MAN2A1Q16706 1144 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 VWA3BQ502W6 1294 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 FAM171BQ6P995 826 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 TRIM65Q6PJ69 517 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 GPRIN1Q7Z2K8 1008 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 FAM35AQ86V20 835 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 SCN4BQ8IWT1 228 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 GPR65Q8IYL9 337 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 TCEAL8Q8IYN2 117 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 FUKQ8N0W3 1084 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 PPM1KQ8N3J5 372 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 SLC4A11Q8NBS3 891 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 SLC2A14Q8TDB8 520 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 ACBD6Q9BR61 282 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 CORO1BQ9BR76 489 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 LSM14BQ9BX40 385 aaKnown RBP8.42□□□□□ -1.06
CCDC40-215ENST00000576033 COL25A1Q9BXS0 654 aaPredicted RBP8.42□□□□□ -1.06
CCDC40-215ENST00000576033 LRRC3Q9BY71 257 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 PRKD2Q9BZL6 878 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 IMPG2Q9BZV3 1241 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 XPO4Q9C0E2 1151 aaKnown RBP8.42□□□□□ -1.06
CCDC40-215ENST00000576033 NDST4Q9H3R1 872 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 KRT82Q9NSB4 513 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 IMPACTQ9P2X3 320 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 CDH9Q9ULB4 789 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.42□□□□□ -1.06
CCDC40-215ENST00000576033 FHOD1Q9Y613 1164 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.42□□□□□ -1.06
CCDC40-215ENST00000576033 COL4A2P08572 1712 aa8.42□□□□□ -1.06
CCDC40-215ENST00000576033 KIF26AQ9ULI4 1882 aaPredicted RBP8.41□□□□□ -1.06
CCDC40-215ENST00000576033 LRRC10BA6NIK2 292 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 TEX33O43247 280 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 NCK2O43639 380 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 STX10O60499 249 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 LRG1P02750 347 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 ASGR2P07307 311 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 RHOP08100 348 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 SRGAP2BP0DMP2 458 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 MYL4P12829 197 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 BRD2P25440 801 aaKnown RBP8.41□□□□□ -1.06
CCDC40-215ENST00000576033 PON1P27169 355 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 ELF1P32519 619 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 LHX1P48742 406 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 PGFP49763 221 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 ARHGAP44Q17R89 818 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 TJAP1Q5JTD0 557 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms