RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 A0A1W2PRU2 124 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 GOLGA6L4A6NEF3 574 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 SPDYE4A6NLX3 237 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 TNFRSF10BO14763 440 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 ECI2O75521 394 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 KIF20AO95235 890 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 SMC2O95347 1197 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 SRFP11831 508 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 PTPN2P17706 415 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 GTF2H1P32780 548 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 MXI1P50539 228 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 CYP4F8P98187 520 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 MYL7Q01449 175 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 SMARCB1Q12824 385 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 ORC1Q13415 861 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 CAMK4Q16566 473 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 NFE2Q16621 373 aaPredicted RBP9.27□□□□□ -0.93
SMG6-216ENST00000575176 DPCR1Q3MIW9 517 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 TANGO2Q6ICL3 276 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 VITQ6UXI7 678 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 METTL23Q86XA0 190 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 TRIM59Q8IWR1 403 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 UBALD2Q8IYN6 164 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 FUKQ8N0W3 1084 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 TRIML1Q8N9V2 468 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 LEMD2Q8NC56 503 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 B3GALNT2Q8NCR0 500 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 NELFBQ8WX92 580 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 CCDC47Q96A33 483 aaKnown RBP9.27□□□□□ -0.93
SMG6-216ENST00000575176 DHTKD1Q96HY7 919 aaPredicted RBP9.27□□□□□ -0.93
SMG6-216ENST00000575176 SEPT5Q99719 369 aaPredicted RBP9.27□□□□□ -0.93
SMG6-216ENST00000575176 KXD1Q9BQD3 176 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 DDX23Q9BUQ8 820 aaKnown RBP9.27□□□□□ -0.93
SMG6-216ENST00000575176 TTLL2Q9BWV7 592 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 B3GNT5Q9BYG0 378 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 ZNF518BQ9C0D4 1074 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 ASAH2Q9NR71 780 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 GDE1Q9NZC3 331 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 FRMD4BQ9Y2L6 1034 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 MRPS23Q9Y3D9 190 aaKnown RBP9.27□□□□□ -0.93
SMG6-216ENST00000575176 ASB3Q9Y575 518 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 PCDHB5Q9Y5E4 795 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 MUC22E2RYF6 1773 aaPredicted RBP9.27□□□□□ -0.93
SMG6-216ENST00000575176 PIEZO1Q92508 2521 aa9.27□□□□□ -0.93
SMG6-216ENST00000575176 CACNA1IQ9P0X4 2223 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 FAM92AA1XBS5 289 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 HHLA1C9JL84 531 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 CLDN5O00501 218 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 PMM2O15305 246 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 CILPO75339 1184 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 BEST1O76090 585 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 OLFM2O95897 454 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 RPL13P26373 211 aaKnown RBP9.26□□□□□ -0.93
SMG6-216ENST00000575176 PCSK1P29120 753 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 WEE1P30291 646 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 ELF1P32519 619 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 PIK3CAP42336 1068 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 PGFP49763 221 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 NLRP12P59046 1061 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 ZXDBP98169 803 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 FKBP3Q00688 224 aaKnown RBP9.26□□□□□ -0.93
SMG6-216ENST00000575176 TSPY1Q01534 308 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 PLD1Q13393 1074 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 BIRC3Q13489 604 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 DDR2Q16832 855 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 MGAT5BQ3V5L5 792 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 ZNF667Q5HYK9 610 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 MDH1BQ5I0G3 518 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 DPY19L2P1Q6NXN4 242 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 PDZD4Q76G19 769 aaPredicted RBP9.26□□□□□ -0.93
SMG6-216ENST00000575176 FAM35AQ86V20 835 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 DCP1BQ8IZD4 617 aaKnown RBP9.26□□□□□ -0.93
SMG6-216ENST00000575176 THEM5Q8N1Q8 247 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 TMEM105Q8N8V8 129 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 GIPC2Q8TF65 315 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 TAF4BQ92750 862 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 NXPE3Q969Y0 559 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 ELSPBP1Q96BH3 223 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 MCRS1Q96EZ8 462 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 SPATA17Q96L03 361 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 CEP63Q96MT8 703 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 SLC22A12Q96S37 553 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 ELOVL4Q9GZR5 314 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 NIF3L1Q9GZT8 377 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 CSNK1G1Q9HCP0 422 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 IL37Q9NZH6 218 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 DLGAP2Q9P1A6 1054 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 NXF1Q9UBU9 619 aaKnown RBP9.26□□□□□ -0.93
SMG6-216ENST00000575176 MYOFQ9NZM1 2061 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 DNAH14Q0VDD8 3507 aa9.26□□□□□ -0.93
SMG6-216ENST00000575176 DCHS1Q96JQ0 3298 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 SLC38A8A6NNN8 435 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 F8VP50 259 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 PSMA7O14818 248 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 CETN3O15182 167 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 PDGFRBP09619 1106 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 EPB41P11171 864 aaKnown RBP9.25□□□□□ -0.93
SMG6-216ENST00000575176 MYL4P12829 197 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 CCDC130P13994 396 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 PTPN1P18031 435 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms