RNA–Protein interactions for RNA: ENST00000575171.1

NXN-208, Transcript of nucleoredoxin, human

TSL 2

Gene NXN, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXN-208	ENST00000575171	TNNI1	P19237	187 aa		10.48	□□□□□ -0.73
NXN-208	ENST00000575171	DGKG	P49619	791 aa		10.48	□□□□□ -0.73
NXN-208	ENST00000575171	POU5F1	Q01860	360 aa	Known RBP	10.48	□□□□□ -0.73
NXN-208	ENST00000575171	PLCB3	Q01970	1234 aa		10.48	□□□□□ -0.73
NXN-208	ENST00000575171	LRRC63	Q05C16	580 aa		10.48	□□□□□ -0.73
NXN-208	ENST00000575171	CYP24A1	Q07973	514 aa		10.48	□□□□□ -0.73
NXN-208	ENST00000575171	MYBPC2	Q14324	1141 aa		10.48	□□□□□ -0.73
NXN-208	ENST00000575171	COL19A1	Q14993	1142 aa		10.48	□□□□□ -0.73
NXN-208	ENST00000575171	PSMD6	Q15008	389 aa		10.48	□□□□□ -0.73
NXN-208	ENST00000575171	SURF1	Q15526	300 aa		10.48	□□□□□ -0.73
NXN-208	ENST00000575171	NFIL3	Q16649	462 aa		10.48	□□□□□ -0.73
NXN-208	ENST00000575171	PTPRO	Q16827	1216 aa		10.48	□□□□□ -0.73
NXN-208	ENST00000575171	KLHL40	Q2TBA0	621 aa		10.48	□□□□□ -0.73
NXN-208	ENST00000575171	EDRF1	Q3B7T1	1238 aa		10.48	□□□□□ -0.73
NXN-208	ENST00000575171	DPCR1	Q3MIW9	517 aa		10.48	□□□□□ -0.73
NXN-208	ENST00000575171	ANKRD40	Q6AI12	368 aa		10.48	□□□□□ -0.73
NXN-208	ENST00000575171	CENPP	Q6IPU0	288 aa		10.48	□□□□□ -0.73
NXN-208	ENST00000575171	FAM186B	Q8IYM0	893 aa		10.48	□□□□□ -0.73
NXN-208	ENST00000575171	GJD3	Q8N144	294 aa		10.48	□□□□□ -0.73
NXN-208	ENST00000575171	BEND7	Q8N7W2	519 aa	Predicted RBP	10.48	□□□□□ -0.73
NXN-208	ENST00000575171	MLKL	Q8NB16	471 aa		10.48	□□□□□ -0.73
NXN-208	ENST00000575171	OR13H1	Q8NG92	308 aa		10.48	□□□□□ -0.73
NXN-208	ENST00000575171	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	10.48	□□□□□ -0.73
NXN-208	ENST00000575171	SPPL3	Q8TCT6	385 aa		10.48	□□□□□ -0.73
NXN-208	ENST00000575171	MICAL1	Q8TDZ2	1067 aa		10.48	□□□□□ -0.73
NXN-208	ENST00000575171	ANKRD36BP1	Q96IX9	119 aa		10.48	□□□□□ -0.73
NXN-208	ENST00000575171	FAM84A	Q96KN4	292 aa		10.48	□□□□□ -0.73
NXN-208	ENST00000575171	FBXL18	Q96ME1	805 aa		10.48	□□□□□ -0.73
NXN-208	ENST00000575171	ENTPD7	Q9NQZ7	604 aa		10.48	□□□□□ -0.73
NXN-208	ENST00000575171	DMAC2	Q9NW81	257 aa		10.48	□□□□□ -0.73
NXN-208	ENST00000575171	PUF60	Q9UHX1	559 aa	Known RBP	10.48	□□□□□ -0.73
NXN-208	ENST00000575171	MKL2	Q9ULH7	1088 aa		10.48	□□□□□ -0.73
NXN-208	ENST00000575171	DERA	Q9Y315	318 aa		10.48	□□□□□ -0.73
NXN-208	ENST00000575171	C2CD2	Q9Y426	696 aa		10.48	□□□□□ -0.73
NXN-208	ENST00000575171	NUB1	Q9Y5A7	615 aa		10.48	□□□□□ -0.73
NXN-208	ENST00000575171	TTC3	P53804	2025 aa		10.48	□□□□□ -0.73
NXN-208	ENST00000575171	RIF1	Q5UIP0	2472 aa	Known RBP	10.47	□□□□□ -0.73
NXN-208	ENST00000575171	KIAA1671	Q9BY89	1806 aa		10.47	□□□□□ -0.73
NXN-208	ENST00000575171	RNF225	M0QZC1	329 aa	Predicted RBP	10.47	□□□□□ -0.73
NXN-208	ENST00000575171	AKAP3	O75969	853 aa		10.47	□□□□□ -0.73
NXN-208	ENST00000575171	CLSTN1	O94985	981 aa		10.47	□□□□□ -0.73
NXN-208	ENST00000575171	TNNC2	P02585	160 aa		10.47	□□□□□ -0.73
NXN-208	ENST00000575171	KRT19	P08727	400 aa		10.47	□□□□□ -0.73
NXN-208	ENST00000575171	EPB41	P11171	864 aa	Known RBP	10.47	□□□□□ -0.73
NXN-208	ENST00000575171	KRT13	P13646	458 aa		10.47	□□□□□ -0.73
NXN-208	ENST00000575171	CYP3A5	P20815	502 aa		10.47	□□□□□ -0.73
NXN-208	ENST00000575171	DNAJB1	P25685	340 aa		10.47	□□□□□ -0.73
NXN-208	ENST00000575171	PSMC2	P35998	433 aa	Known RBP	10.47	□□□□□ -0.73
NXN-208	ENST00000575171	MRE11	P49959	708 aa		10.47	□□□□□ -0.73
NXN-208	ENST00000575171	SNRPN	P63162	240 aa	Known RBP	10.47	□□□□□ -0.73
NXN-208	ENST00000575171	FKBP3	Q00688	224 aa	Known RBP	10.47	□□□□□ -0.73
NXN-208	ENST00000575171	NHLH1	Q02575	133 aa		10.47	□□□□□ -0.73
NXN-208	ENST00000575171	UBE3A	Q05086	875 aa		10.47	□□□□□ -0.73
NXN-208	ENST00000575171	NFKBIB	Q15653	356 aa		10.47	□□□□□ -0.73
NXN-208	ENST00000575171	ZBTB6	Q15916	424 aa		10.47	□□□□□ -0.73
NXN-208	ENST00000575171	UPP1	Q16831	310 aa		10.47	□□□□□ -0.73
NXN-208	ENST00000575171	SPATA1	Q5VX52	437 aa		10.47	□□□□□ -0.73
NXN-208	ENST00000575171	PLPP4	Q5VZY2	271 aa		10.47	□□□□□ -0.73
NXN-208	ENST00000575171	FUT10	Q6P4F1	479 aa		10.47	□□□□□ -0.73
NXN-208	ENST00000575171	DCLRE1A	Q6PJP8	1040 aa		10.47	□□□□□ -0.73
NXN-208	ENST00000575171	FAM35A	Q86V20	835 aa		10.47	□□□□□ -0.73
NXN-208	ENST00000575171	NT5DC4	Q86YG4	428 aa		10.47	□□□□□ -0.73
NXN-208	ENST00000575171	VPS52	Q8N1B4	723 aa		10.47	□□□□□ -0.73
NXN-208	ENST00000575171	CACTIN	Q8WUQ7	758 aa	Known RBP	10.47	□□□□□ -0.73
NXN-208	ENST00000575171	TSPAN18	Q96SJ8	248 aa		10.47	□□□□□ -0.73
NXN-208	ENST00000575171	POP1	Q99575	1024 aa	Known RBP	10.47	□□□□□ -0.73
NXN-208	ENST00000575171	CGRRF1	Q99675	332 aa		10.47	□□□□□ -0.73
NXN-208	ENST00000575171	TCF25	Q9BQ70	676 aa		10.47	□□□□□ -0.73
NXN-208	ENST00000575171	MTMR12	Q9C0I1	747 aa		10.47	□□□□□ -0.73
NXN-208	ENST00000575171	LMAN2L	Q9H0V9	348 aa		10.47	□□□□□ -0.73
NXN-208	ENST00000575171	MMRN2	Q9H8L6	949 aa		10.47	□□□□□ -0.73
NXN-208	ENST00000575171	TLR9	Q9NR96	1032 aa		10.47	□□□□□ -0.73
NXN-208	ENST00000575171	DPP3	Q9NY33	737 aa		10.47	□□□□□ -0.73
NXN-208	ENST00000575171	ADAM28	Q9UKQ2	775 aa		10.47	□□□□□ -0.73
NXN-208	ENST00000575171	STARD13	Q9Y3M8	1113 aa		10.47	□□□□□ -0.73
NXN-208	ENST00000575171	R3HCC1	Q9Y3T6	440 aa	Known RBP	10.47	□□□□□ -0.73
NXN-208	ENST00000575171	VPS13A	Q96RL7	3174 aa		10.47	□□□□□ -0.73
NXN-208	ENST00000575171	DMD	P11532	3685 aa		10.47	□□□□□ -0.73
NXN-208	ENST00000575171	CACNA1A	O00555	2505 aa		10.46	□□□□□ -0.73
NXN-208	ENST00000575171	LRRIQ3	A6PVS8	624 aa	Predicted RBP	10.46	□□□□□ -0.73
NXN-208	ENST00000575171		I3L4J1	428 aa		10.46	□□□□□ -0.73
NXN-208	ENST00000575171		M0R082	166 aa		10.46	□□□□□ -0.73
NXN-208	ENST00000575171	PPEF2	O14830	753 aa		10.46	□□□□□ -0.73
NXN-208	ENST00000575171	ITGB3	P05106	788 aa		10.46	□□□□□ -0.73
NXN-208	ENST00000575171	HOXB4	P17483	251 aa	Predicted RBP	10.46	□□□□□ -0.73
NXN-208	ENST00000575171	LRPAP1	P30533	357 aa		10.46	□□□□□ -0.73
NXN-208	ENST00000575171	POLR2B	P30876	1174 aa	Known RBP	10.46	□□□□□ -0.73
NXN-208	ENST00000575171	RPL9	P32969	192 aa	Known RBP	10.46	□□□□□ -0.73
NXN-208	ENST00000575171	IRS1	P35568	1242 aa		10.46	□□□□□ -0.73
NXN-208	ENST00000575171	BRCC3	P46736	316 aa		10.46	□□□□□ -0.73
NXN-208	ENST00000575171	VAMP7	P51809	220 aa		10.46	□□□□□ -0.73
NXN-208	ENST00000575171	ERVFC1	P60507	584 aa		10.46	□□□□□ -0.73
NXN-208	ENST00000575171	BIRC3	Q13489	604 aa		10.46	□□□□□ -0.73
NXN-208	ENST00000575171	BMS1	Q14692	1282 aa	Known RBP	10.46	□□□□□ -0.73
NXN-208	ENST00000575171	TPD52L1	Q16890	204 aa	Predicted RBP	10.46	□□□□□ -0.73
NXN-208	ENST00000575171	CCDC40	Q4G0X9	1142 aa		10.46	□□□□□ -0.73
NXN-208	ENST00000575171	C9orf57	Q5W0N0	161 aa		10.46	□□□□□ -0.73
NXN-208	ENST00000575171	TTI2	Q6NXR4	508 aa		10.46	□□□□□ -0.73
NXN-208	ENST00000575171	RBM43	Q6ZSC3	357 aa	Known RBP	10.46	□□□□□ -0.73
NXN-208	ENST00000575171	TMC7	Q7Z402	723 aa		10.46	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms