RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 TMEM184AQ6ZMB5 413 aa15.42■□□□□ 0.06
NPLOC4-218ENST00000574964 SCN4BQ8IWT1 228 aa15.42■□□□□ 0.06
NPLOC4-218ENST00000574964 C12orf29Q8N999 325 aa15.42■□□□□ 0.06
NPLOC4-218ENST00000574964 SLC4A11Q8NBS3 891 aa15.42■□□□□ 0.06
NPLOC4-218ENST00000574964 SLC2A14Q8TDB8 520 aa15.42■□□□□ 0.06
NPLOC4-218ENST00000574964 SHC3Q92529 594 aa15.42■□□□□ 0.06
NPLOC4-218ENST00000574964 NUP58Q9BVL2 599 aa15.42■□□□□ 0.06
NPLOC4-218ENST00000574964 B3GNT5Q9BYG0 378 aa15.42■□□□□ 0.06
NPLOC4-218ENST00000574964 SFXN1Q9H9B4 322 aa15.42■□□□□ 0.06
NPLOC4-218ENST00000574964 PIDD1Q9HB75 910 aa15.42■□□□□ 0.06
NPLOC4-218ENST00000574964 ABCB6Q9NP58 842 aa15.42■□□□□ 0.06
NPLOC4-218ENST00000574964 HSFX1Q9UBD0 423 aa15.42■□□□□ 0.06
NPLOC4-218ENST00000574964 AJAP1Q9UKB5 411 aaPredicted RBP15.42■□□□□ 0.06
NPLOC4-218ENST00000574964 INSL5Q9Y5Q6 135 aa15.42■□□□□ 0.06
NPLOC4-218ENST00000574964 GREB1Q4ZG55 1949 aa15.42■□□□□ 0.06
NPLOC4-218ENST00000574964 RNF225M0QZC1 329 aaPredicted RBP15.41■□□□□ 0.06
NPLOC4-218ENST00000574964 FOXN3O00409 490 aaPredicted RBP15.41■□□□□ 0.06
NPLOC4-218ENST00000574964 CLDN5O00501 218 aa15.41■□□□□ 0.06
NPLOC4-218ENST00000574964 NOL4O94818 638 aa15.41■□□□□ 0.06
NPLOC4-218ENST00000574964 HAPLN1P10915 354 aaPredicted RBP15.41■□□□□ 0.06
NPLOC4-218ENST00000574964 VDRP11473 427 aa15.41■□□□□ 0.06
NPLOC4-218ENST00000574964 CCDC130P13994 396 aa15.41■□□□□ 0.06
NPLOC4-218ENST00000574964 HOXB8P17481 243 aaPredicted RBP15.41■□□□□ 0.06
NPLOC4-218ENST00000574964 CYP2F1P24903 491 aa15.41■□□□□ 0.06
NPLOC4-218ENST00000574964 ANXA13P27216 316 aa15.41■□□□□ 0.06
NPLOC4-218ENST00000574964 GRIK1P39086 918 aa15.41■□□□□ 0.06
NPLOC4-218ENST00000574964 STAT1P42224 750 aa15.41■□□□□ 0.06
NPLOC4-218ENST00000574964 EPHB3P54753 998 aa15.41■□□□□ 0.06
NPLOC4-218ENST00000574964 RPL10AP62906 217 aaKnown RBP15.41■□□□□ 0.06
NPLOC4-218ENST00000574964 PTK2Q05397 1052 aa15.41■□□□□ 0.06
NPLOC4-218ENST00000574964 VEPH1Q14D04 833 aa15.41■□□□□ 0.06
NPLOC4-218ENST00000574964 TAF12Q16514 161 aa15.41■□□□□ 0.06
NPLOC4-218ENST00000574964 CTC1Q2NKJ3 1217 aa15.41■□□□□ 0.06
NPLOC4-218ENST00000574964 CFAP221Q4G0U5 840 aa15.41■□□□□ 0.06
NPLOC4-218ENST00000574964 RARS2Q5T160 578 aaKnown RBP15.41■□□□□ 0.06
NPLOC4-218ENST00000574964 DPY19L2P1Q6NXN4 242 aa15.41■□□□□ 0.06
NPLOC4-218ENST00000574964 SARM1Q6SZW1 724 aa15.41■□□□□ 0.06
NPLOC4-218ENST00000574964 VSTM1Q6UX27 236 aa15.41■□□□□ 0.06
NPLOC4-218ENST00000574964 RTL10Q7L3V2 364 aa15.41■□□□□ 0.06
NPLOC4-218ENST00000574964 ELMOD1Q8N336 334 aa15.41■□□□□ 0.06
NPLOC4-218ENST00000574964 C12orf76Q8N812 135 aaPredicted RBP15.41■□□□□ 0.06
NPLOC4-218ENST00000574964 HLA-CQ95604 372 aa15.41■□□□□ 0.06
NPLOC4-218ENST00000574964 APOL5Q9BWW9 433 aa15.41■□□□□ 0.06
NPLOC4-218ENST00000574964 UBE2ZQ9H832 354 aaPredicted RBP15.41■□□□□ 0.06
NPLOC4-218ENST00000574964 ZDHHC7Q9NXF8 308 aa15.41■□□□□ 0.06
NPLOC4-218ENST00000574964 CEP72Q9P209 647 aa15.41■□□□□ 0.06
NPLOC4-218ENST00000574964 YIPF1Q9Y548 306 aa15.41■□□□□ 0.06
NPLOC4-218ENST00000574964 CCDC195A0A1B0GUA6 201 aa15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 EPHB6O15197 1021 aa15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 CCL16O15467 120 aa15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 XYLBO75191 536 aa15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 TBX10O75333 385 aa15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 RFPL2O75678 378 aa15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 AP1G2O75843 785 aa15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 VNN2O95498 520 aa15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 HNRNPA1P09651 372 aaKnown RBP eCLIP15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 KCNA5P22460 613 aa15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 GNA15P30679 374 aa15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 SLC8A3P57103 927 aa15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 BPIFB4P59827 614 aa15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 DLX2Q07687 328 aaPredicted RBP15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 TWF1Q12792 350 aa15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 CLUL1Q15846 466 aa15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 PPP1R26Q5T8A7 1209 aaPredicted RBP15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 SMYD5Q6GMV2 418 aa15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 CES5AQ6NT32 575 aa15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 TMC5Q6UXY8 1006 aa15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 FAM35AQ86V20 835 aa15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 TTC9BQ8N6N2 239 aa15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 SMARCD1Q96GM5 515 aa15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 ZNF512Q96ME7 567 aaPredicted RBP15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 HNRNPABQ99729 332 aaKnown RBP15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 NAA15Q9BXJ9 866 aaKnown RBP15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 RHOBTB2Q9BYZ6 727 aa15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 ZNF518BQ9C0D4 1074 aa15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 CRISPLD1Q9H336 500 aa15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 HESX1Q9UBX0 185 aa15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 CD207Q9UJ71 328 aa15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 COG5Q9UP83 839 aa15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 CNTN6Q9UQ52 1028 aa15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.4■□□□□ 0.06
NPLOC4-218ENST00000574964 F8VZ95 297 aa15.39■□□□□ 0.05
NPLOC4-218ENST00000574964 H3BQ06 376 aaPredicted RBP15.39■□□□□ 0.05
NPLOC4-218ENST00000574964 TRIM66O15016 1216 aa15.39■□□□□ 0.05
NPLOC4-218ENST00000574964 CYP26A1O43174 497 aa15.39■□□□□ 0.05
NPLOC4-218ENST00000574964 THAP12O43422 761 aa15.39■□□□□ 0.05
NPLOC4-218ENST00000574964 MED7O43513 233 aa15.39■□□□□ 0.05
NPLOC4-218ENST00000574964 SOAT2O75908 522 aa15.39■□□□□ 0.05
NPLOC4-218ENST00000574964 FAM200BP0CF97 657 aa15.39■□□□□ 0.05
NPLOC4-218ENST00000574964 PNMA6AP0CW24 399 aaPredicted RBP15.39■□□□□ 0.05
NPLOC4-218ENST00000574964 BRD2P25440 801 aaKnown RBP15.39■□□□□ 0.05
NPLOC4-218ENST00000574964 HOXA9P31269 272 aa15.39■□□□□ 0.05
NPLOC4-218ENST00000574964 LTBRP36941 435 aa15.39■□□□□ 0.05
NPLOC4-218ENST00000574964 MAGEA11P43364 429 aa15.39■□□□□ 0.05
NPLOC4-218ENST00000574964 ZNF132P52740 706 aa15.39■□□□□ 0.05
NPLOC4-218ENST00000574964 COL19A1Q14993 1142 aa15.39■□□□□ 0.05
NPLOC4-218ENST00000574964 STILQ15468 1287 aa15.39■□□□□ 0.05
NPLOC4-218ENST00000574964 DDR2Q16832 855 aa15.39■□□□□ 0.05
NPLOC4-218ENST00000574964 GOLGA7BQ2TAP0 167 aa15.39■□□□□ 0.05
NPLOC4-218ENST00000574964 ARHGAP17Q68EM7 881 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms