RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 CCDC127Q96BQ5 260 aa10.35□□□□□ -0.75
NPLOC4-216ENST00000574344 ZFYVE19Q96K21 471 aa10.35□□□□□ -0.75
NPLOC4-216ENST00000574344 CGRRF1Q99675 332 aa10.35□□□□□ -0.75
NPLOC4-216ENST00000574344 SYT15Q9BQS2 421 aa10.35□□□□□ -0.75
NPLOC4-216ENST00000574344 RBSNQ9H1K0 784 aa10.35□□□□□ -0.75
NPLOC4-216ENST00000574344 TASP1Q9H6P5 420 aa10.35□□□□□ -0.75
NPLOC4-216ENST00000574344 RCOR1Q9UKL0 485 aa10.35□□□□□ -0.75
NPLOC4-216ENST00000574344 GTF3C4Q9UKN8 822 aa10.35□□□□□ -0.75
NPLOC4-216ENST00000574344 RALGAPA1Q6GYQ0 2036 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 A0A1B0GVL5 298 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 A0A1W2PQ27 194 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 A0A1W2PQ64 194 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 A0A1W2PQD8 194 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 CHADO15335 359 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 TGFB1I1O43294 461 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 HCRTO43612 131 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 PHACTR2O75167 634 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 PRAMEF12O95522 483 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 LMNAP02545 664 aaKnown RBP10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 SLFN14P0C7P3 912 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 PFKFB1P16118 471 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 CCNE1P24864 410 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 CYP2F1P24903 491 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 SNRPFP62306 86 aaKnown RBP10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 CYP24A1Q07973 514 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 EHHADHQ08426 723 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 BIRC3Q13489 604 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 TRPC3Q13507 836 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 DDR2Q16832 855 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 CCDC142Q17RM4 750 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 KNOP1Q1ED39 458 aaKnown RBP10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 SOWAHAQ2M3V2 549 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 ARHGAP29Q52LW3 1261 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 SCARA3Q6AZY7 606 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 C4orf50Q6ZRC1 276 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 TRAPPC11Q7Z392 1133 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 MAB21L3Q8N8X9 362 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 CXorf38Q8TB03 319 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 SPATA18Q8TC71 538 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 BPIFB1Q8TDL5 484 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 RSPRY1Q96DX4 576 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 PPP1R9BQ96SB3 815 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 MKNK1Q9BUB5 465 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 SMG9Q9H0W8 520 aaKnown RBP10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 SNX25Q9H3E2 840 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 IL21Q9HBE4 155 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 TRPC7Q9HCX4 862 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 ABCB6Q9NP58 842 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 TRPV5Q9NQA5 729 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 THG1LQ9NWX6 298 aaKnown RBP10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 CGNQ9P2M7 1197 aaKnown RBP10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 UXTQ9UBK9 157 aaPredicted RBP10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 ZMYM5Q9UJ78 669 aa10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 RIF1Q5UIP0 2472 aaKnown RBP10.34□□□□□ -0.75
NPLOC4-216ENST00000574344 PTPRZ1P23471 2315 aaPredicted RBP10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 ACTN4O43707 911 aaKnown RBP10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 PTMAP06454 111 aaKnown RBP10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 PDGFRBP09619 1106 aa10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 DDX6P26196 483 aaKnown RBP eCLIP10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 ANXA13P27216 316 aa10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 RPS9P46781 194 aaKnown RBP10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 SOX9P48436 509 aa10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 NLRP12P59046 1061 aa10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 CYP27A1Q02318 531 aa10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 FCHO2Q0JRZ9 810 aa10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 PPP2R5DQ14738 602 aa10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 PSMD6Q15008 389 aa10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 MAPRE1Q15691 268 aaKnown RBP10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 BMT2Q1RMZ1 405 aa10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 C1orf228Q6PIY5 440 aa10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 DPH6Q7L8W6 267 aa10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 CMTM8Q8IZV2 173 aa10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 CELF5Q8N6W0 485 aaKnown RBP10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 FSIP1Q8NA03 581 aa10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 RNF214Q8ND24 703 aa10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 OR6B3Q8NGW1 331 aa10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 GOLGA5Q8TBA6 731 aa10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 MYLPFQ96A32 169 aa10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 CCDC47Q96A33 483 aaKnown RBP10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 CLDN23Q96B33 292 aa10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 PAGE5Q96GU1 130 aa10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 MSANTD3Q96H12 275 aa10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 CCDC34Q96HJ3 373 aa10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 FUBP3Q96I24 572 aaKnown RBP eCLIP10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 SEMA4AQ9H3S1 761 aa10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 C8orf33Q9H7E9 229 aaPredicted RBP10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 LMAN1LQ9HAT1 526 aa10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 OBP2AQ9NY56 170 aa10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 GTSE1Q9NYZ3 720 aa10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 MAGEC2Q9UBF1 373 aaPredicted RBP10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 FBXO4Q9UKT5 387 aa10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 CDH9Q9ULB4 789 aa10.33□□□□□ -0.76
NPLOC4-216ENST00000574344 MYBPHLA2RUH7 354 aa10.32□□□□□ -0.76
NPLOC4-216ENST00000574344 SPECC1L-ADORA2AF8WAN1 911 aa10.32□□□□□ -0.76
NPLOC4-216ENST00000574344 ARNTLO00327 626 aa10.32□□□□□ -0.76
NPLOC4-216ENST00000574344 GABRDO14764 452 aa10.32□□□□□ -0.76
NPLOC4-216ENST00000574344 ATP2C2O75185 946 aa10.32□□□□□ -0.76
NPLOC4-216ENST00000574344 CKMP06732 381 aa10.32□□□□□ -0.76
NPLOC4-216ENST00000574344 HMGA1P17096 107 aaKnown RBP10.32□□□□□ -0.76
NPLOC4-216ENST00000574344 WARSP23381 471 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms