RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 PP2D1A8MPX8 630 aa12.87□□□□□ -0.35
CTNS-208ENST00000574218 H0Y626 953 aa12.87□□□□□ -0.35
CTNS-208ENST00000574218 LAD1O00515 517 aa12.87□□□□□ -0.35
CTNS-208ENST00000574218 CDX4O14627 284 aaPredicted RBP12.87□□□□□ -0.35
CTNS-208ENST00000574218 TRIM16O95361 564 aa12.87□□□□□ -0.35
CTNS-208ENST00000574218 NFATC1O95644 943 aa12.87□□□□□ -0.35
CTNS-208ENST00000574218 F11P03951 625 aa12.87□□□□□ -0.35
CTNS-208ENST00000574218 SCP2P22307 547 aa12.87□□□□□ -0.35
CTNS-208ENST00000574218 SEC13P55735 322 aa12.87□□□□□ -0.35
CTNS-208ENST00000574218 RPL10AP62906 217 aaKnown RBP12.87□□□□□ -0.35
CTNS-208ENST00000574218 IRX4P78413 519 aa12.87□□□□□ -0.35
CTNS-208ENST00000574218 BYSLQ13895 437 aaKnown RBP12.87□□□□□ -0.35
CTNS-208ENST00000574218 NFE2Q16621 373 aaPredicted RBP12.87□□□□□ -0.35
CTNS-208ENST00000574218 C2orf27AQ580R0 203 aa12.87□□□□□ -0.35
CTNS-208ENST00000574218 FSIP1Q8NA03 581 aa12.87□□□□□ -0.35
CTNS-208ENST00000574218 CNOT6LQ96LI5 555 aaKnown RBP12.87□□□□□ -0.35
CTNS-208ENST00000574218 KCND2Q9NZV8 630 aa12.87□□□□□ -0.35
CTNS-208ENST00000574218 BCCIPQ9P287 314 aaKnown RBP eCLIP12.87□□□□□ -0.35
CTNS-208ENST00000574218 MSRB2Q9Y3D2 182 aa12.87□□□□□ -0.35
CTNS-208ENST00000574218 WNT6Q9Y6F9 365 aa12.87□□□□□ -0.35
CTNS-208ENST00000574218 SPEGQ15772 3267 aa12.86□□□□□ -0.35
CTNS-208ENST00000574218 DSPP15924 2871 aaKnown RBP12.86□□□□□ -0.35
CTNS-208ENST00000574218 MYO18AQ92614 2054 aaKnown RBP12.86□□□□□ -0.35
CTNS-208ENST00000574218 K7ENM7 598 aa12.86□□□□□ -0.35
CTNS-208ENST00000574218 TULP1O00294 542 aaPredicted RBP12.86□□□□□ -0.35
CTNS-208ENST00000574218 PIRO00625 290 aa12.86□□□□□ -0.35
CTNS-208ENST00000574218 SEC24BO95487 1268 aa12.86□□□□□ -0.35
CTNS-208ENST00000574218 NFICP08651 508 aa12.86□□□□□ -0.35
CTNS-208ENST00000574218 BCKDHBP21953 392 aa12.86□□□□□ -0.35
CTNS-208ENST00000574218 NCKAP1LP55160 1127 aa12.86□□□□□ -0.35
CTNS-208ENST00000574218 SIM1P81133 766 aaPredicted RBP12.86□□□□□ -0.35
CTNS-208ENST00000574218 NBR1Q14596 966 aa12.86□□□□□ -0.35
CTNS-208ENST00000574218 KCNB1Q14721 858 aa12.86□□□□□ -0.35
CTNS-208ENST00000574218 SV2CQ496J9 727 aa12.86□□□□□ -0.35
CTNS-208ENST00000574218 NAIF1Q69YI7 327 aaPredicted RBP12.86□□□□□ -0.35
CTNS-208ENST00000574218 ARMCX6Q7L4S7 300 aa12.86□□□□□ -0.35
CTNS-208ENST00000574218 TMEM150AQ86TG1 271 aa12.86□□□□□ -0.35
CTNS-208ENST00000574218 KCTD17Q8N5Z5 321 aa12.86□□□□□ -0.35
CTNS-208ENST00000574218 C4orf32Q8N8J7 132 aa12.86□□□□□ -0.35
CTNS-208ENST00000574218 SYT2Q8N9I0 419 aaPredicted RBP12.86□□□□□ -0.35
CTNS-208ENST00000574218 ZNF560Q96MR9 790 aa12.86□□□□□ -0.35
CTNS-208ENST00000574218 PI4K2AQ9BTU6 479 aa12.86□□□□□ -0.35
CTNS-208ENST00000574218 HAPLN2Q9GZV7 340 aa12.86□□□□□ -0.35
CTNS-208ENST00000574218 MYOFQ9NZM1 2061 aa12.85□□□□□ -0.35
CTNS-208ENST00000574218 TNFRSF10BO14763 440 aa12.85□□□□□ -0.35
CTNS-208ENST00000574218 CFIP05156 583 aa12.85□□□□□ -0.35
CTNS-208ENST00000574218 PLA2G4BP0C869 781 aa12.85□□□□□ -0.35
CTNS-208ENST00000574218 HMGA1P17096 107 aaKnown RBP12.85□□□□□ -0.35
CTNS-208ENST00000574218 ENGP17813 658 aa12.85□□□□□ -0.35
CTNS-208ENST00000574218 CDC25AP30304 524 aa12.85□□□□□ -0.35
CTNS-208ENST00000574218 ABCD1P33897 745 aa12.85□□□□□ -0.35
CTNS-208ENST00000574218 PDE6CP51160 858 aa12.85□□□□□ -0.35
CTNS-208ENST00000574218 NEK4P51957 841 aa12.85□□□□□ -0.35
CTNS-208ENST00000574218 USP4Q13107 963 aa12.85□□□□□ -0.35
CTNS-208ENST00000574218 ZNF77Q15935 545 aa12.85□□□□□ -0.35
CTNS-208ENST00000574218 EML3Q32P44 896 aa12.85□□□□□ -0.35
CTNS-208ENST00000574218 WSCD1Q658N2 575 aa12.85□□□□□ -0.35
CTNS-208ENST00000574218 KCNK18Q7Z418 384 aa12.85□□□□□ -0.35
CTNS-208ENST00000574218 RASSF3Q86WH2 238 aa12.85□□□□□ -0.35
CTNS-208ENST00000574218 SYT12Q8IV01 421 aa12.85□□□□□ -0.35
CTNS-208ENST00000574218 PGBD3Q8N328 593 aa12.85□□□□□ -0.35
CTNS-208ENST00000574218 CCDC33Q8N5R6 958 aa12.85□□□□□ -0.35
CTNS-208ENST00000574218 SPDYE1Q8NFV5 336 aaPredicted RBP12.85□□□□□ -0.35
CTNS-208ENST00000574218 USP33Q8TEY7 942 aa12.85□□□□□ -0.35
CTNS-208ENST00000574218 WHAMMQ8TF30 809 aa12.85□□□□□ -0.35
CTNS-208ENST00000574218 ASB7Q9H672 318 aa12.85□□□□□ -0.35
CTNS-208ENST00000574218 POLMQ9NP87 494 aaPredicted RBP12.85□□□□□ -0.35
CTNS-208ENST00000574218 DPP3Q9NY33 737 aa12.85□□□□□ -0.35
CTNS-208ENST00000574218 KLK13Q9UKR3 277 aa12.85□□□□□ -0.35
CTNS-208ENST00000574218 MMP17Q9ULZ9 603 aa12.85□□□□□ -0.35
CTNS-208ENST00000574218 C2CD2Q9Y426 696 aa12.85□□□□□ -0.35
CTNS-208ENST00000574218 CACNA1EQ15878 2313 aa12.85□□□□□ -0.35
CTNS-208ENST00000574218 SPAARA0A1B0GVQ0 90 aa12.84□□□□□ -0.35
CTNS-208ENST00000574218 ANO9A1A5B4 782 aa12.84□□□□□ -0.35
CTNS-208ENST00000574218 MYMKA6NI61 221 aa12.84□□□□□ -0.35
CTNS-208ENST00000574218 FAM13AO94988 1023 aa12.84□□□□□ -0.35
CTNS-208ENST00000574218 KRT18P05783 430 aaKnown RBP12.84□□□□□ -0.35
CTNS-208ENST00000574218 ADRB2P07550 413 aa12.84□□□□□ -0.35
CTNS-208ENST00000574218 PRPHP41219 470 aa12.84□□□□□ -0.35
CTNS-208ENST00000574218 GPR15P49685 360 aa12.84□□□□□ -0.35
CTNS-208ENST00000574218 MRPS21P82921 87 aaKnown RBP12.84□□□□□ -0.35
CTNS-208ENST00000574218 HMGN5P82970 282 aaKnown RBP12.84□□□□□ -0.35
CTNS-208ENST00000574218 MYL7Q01449 175 aa12.84□□□□□ -0.35
CTNS-208ENST00000574218 SDHAF4Q5VUM1 108 aa12.84□□□□□ -0.35
CTNS-208ENST00000574218 LYSMD4Q5XG99 296 aa12.84□□□□□ -0.35
CTNS-208ENST00000574218 LRRTM3Q86VH5 581 aa12.84□□□□□ -0.35
CTNS-208ENST00000574218 CCDC83Q8IWF9 413 aa12.84□□□□□ -0.35
CTNS-208ENST00000574218 EFCAB13Q8IY85 973 aa12.84□□□□□ -0.35
CTNS-208ENST00000574218 MYCT1Q8N699 235 aa12.84□□□□□ -0.35
CTNS-208ENST00000574218 STKLD1Q8NE28 680 aa12.84□□□□□ -0.35
CTNS-208ENST00000574218 MDGA1Q8NFP4 955 aa12.84□□□□□ -0.35
CTNS-208ENST00000574218 FBXO18Q8NFZ0 1043 aa12.84□□□□□ -0.35
CTNS-208ENST00000574218 RIN3Q8TB24 985 aa12.84□□□□□ -0.35
CTNS-208ENST00000574218 SH3RF2Q8TEC5 729 aa12.84□□□□□ -0.35
CTNS-208ENST00000574218 TRMT2BQ96GJ1 504 aaKnown RBP12.84□□□□□ -0.35
CTNS-208ENST00000574218 PLIN2Q99541 437 aa12.84□□□□□ -0.35
CTNS-208ENST00000574218 GTPBP2Q9BX10 602 aaKnown RBP12.84□□□□□ -0.35
CTNS-208ENST00000574218 ZHX3Q9H4I2 956 aa12.84□□□□□ -0.35
CTNS-208ENST00000574218 CPSF3Q9UKF6 684 aaKnown RBP12.84□□□□□ -0.35
CTNS-208ENST00000574218 ODF2LQ9ULJ1 636 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms