RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 PCSK1P29120 753 aa18.67■□□□□ 0.58
SMG6-214ENST00000573827 CDC25CP30307 473 aa18.67■□□□□ 0.58
SMG6-214ENST00000573827 SYKP43405 635 aa18.67■□□□□ 0.58
SMG6-214ENST00000573827 UBXN2BQ14CS0 331 aa18.67■□□□□ 0.58
SMG6-214ENST00000573827 WDR44Q5JSH3 913 aa18.67■□□□□ 0.58
SMG6-214ENST00000573827 RIN3Q8TB24 985 aa18.67■□□□□ 0.58
SMG6-214ENST00000573827 GOLGA5Q8TBA6 731 aa18.67■□□□□ 0.58
SMG6-214ENST00000573827 PARD3BQ8TEW8 1205 aa18.67■□□□□ 0.58
SMG6-214ENST00000573827 FUBP3Q96I24 572 aaKnown RBP eCLIP18.67■□□□□ 0.58
SMG6-214ENST00000573827 SYT15Q9BQS2 421 aa18.67■□□□□ 0.58
SMG6-214ENST00000573827 SCAND2PQ9GZW5 306 aaPredicted RBP18.67■□□□□ 0.58
SMG6-214ENST00000573827 EXOC1Q9NV70 894 aa18.67■□□□□ 0.58
SMG6-214ENST00000573827 LRRIQ3A6PVS8 624 aaPredicted RBP18.66■□□□□ 0.58
SMG6-214ENST00000573827 PDXKO00764 312 aa18.66■□□□□ 0.58
SMG6-214ENST00000573827 CHADO15335 359 aa18.66■□□□□ 0.58
SMG6-214ENST00000573827 GFRA3O60609 400 aa18.66■□□□□ 0.58
SMG6-214ENST00000573827 EXOC3O60645 756 aa18.66■□□□□ 0.58
SMG6-214ENST00000573827 RHOBTB3O94955 611 aa18.66■□□□□ 0.58
SMG6-214ENST00000573827 RPN1P04843 607 aaKnown RBP18.66■□□□□ 0.58
SMG6-214ENST00000573827 FAM163BP0C2L3 166 aa18.66■□□□□ 0.58
SMG6-214ENST00000573827 MAGEA11P43364 429 aa18.66■□□□□ 0.58
SMG6-214ENST00000573827 RPS9P46781 194 aaKnown RBP18.66■□□□□ 0.58
SMG6-214ENST00000573827 MLLT6P55198 1093 aaPredicted RBP18.66■□□□□ 0.58
SMG6-214ENST00000573827 MYL6P60660 151 aa18.66■□□□□ 0.58
SMG6-214ENST00000573827 PSMC1P62191 440 aaKnown RBP18.66■□□□□ 0.58
SMG6-214ENST00000573827 C1orf220Q5T0J3 134 aa18.66■□□□□ 0.58
SMG6-214ENST00000573827 TDRD10Q5VZ19 366 aaKnown RBP18.66■□□□□ 0.58
SMG6-214ENST00000573827 ZNF852Q6ZMS4 543 aa18.66■□□□□ 0.58
SMG6-214ENST00000573827 KRBA2Q6ZNG9 492 aa18.66■□□□□ 0.58
SMG6-214ENST00000573827 FSIP1Q8NA03 581 aa18.66■□□□□ 0.58
SMG6-214ENST00000573827 FAM200AQ8TCP9 573 aa18.66■□□□□ 0.58
SMG6-214ENST00000573827 TRMT2BQ96GJ1 504 aaKnown RBP18.66■□□□□ 0.58
SMG6-214ENST00000573827 FNBP1Q96RU3 617 aa18.66■□□□□ 0.58
SMG6-214ENST00000573827 SMG9Q9H0W8 520 aaKnown RBP18.66■□□□□ 0.58
SMG6-214ENST00000573827 VRTNQ9H8Y1 702 aa18.66■□□□□ 0.58
SMG6-214ENST00000573827 GDPD2Q9HCC8 539 aa18.66■□□□□ 0.58
SMG6-214ENST00000573827 CDH9Q9ULB4 789 aa18.66■□□□□ 0.58
SMG6-214ENST00000573827 CACNA1AO00555 2505 aa18.66■□□□□ 0.58
SMG6-214ENST00000573827 GREB1Q4ZG55 1949 aa18.65■□□□□ 0.58
SMG6-214ENST00000573827 ZNF263O14978 683 aa18.65■□□□□ 0.58
SMG6-214ENST00000573827 VNN1O95497 513 aa18.65■□□□□ 0.58
SMG6-214ENST00000573827 C4BPAP04003 597 aaKnown RBP18.65■□□□□ 0.58
SMG6-214ENST00000573827 SP9P0CG40 484 aa18.65■□□□□ 0.58
SMG6-214ENST00000573827 MYLPFQ96A32 169 aa18.65■□□□□ 0.58
SMG6-214ENST00000573827 NELL2Q99435 816 aa18.65■□□□□ 0.58
SMG6-214ENST00000573827 TMEM30AQ9NV96 361 aa18.65■□□□□ 0.58
SMG6-214ENST00000573827 CCL26Q9Y258 94 aa18.65■□□□□ 0.58
SMG6-214ENST00000573827 PIAS3Q9Y6X2 628 aa18.65■□□□□ 0.58
SMG6-214ENST00000573827 DNAH14Q0VDD8 3507 aa18.65■□□□□ 0.58
SMG6-214ENST00000573827 SLC38A8A6NNN8 435 aa18.64■□□□□ 0.57
SMG6-214ENST00000573827 SOBPA7XYQ1 873 aa18.64■□□□□ 0.57
SMG6-214ENST00000573827 NR3C1P04150 777 aa18.64■□□□□ 0.57
SMG6-214ENST00000573827 CSH1P0DML2 217 aa18.64■□□□□ 0.57
SMG6-214ENST00000573827 CSH2P0DML3 217 aa18.64■□□□□ 0.57
SMG6-214ENST00000573827 MAGEA9P43362 315 aa18.64■□□□□ 0.57
SMG6-214ENST00000573827 MCCD1P59942 119 aaPredicted RBP18.64■□□□□ 0.57
SMG6-214ENST00000573827 RPL10AP62906 217 aaKnown RBP18.64■□□□□ 0.57
SMG6-214ENST00000573827 DLG4P78352 724 aa18.64■□□□□ 0.57
SMG6-214ENST00000573827 ARHGAP15Q53QZ3 475 aa18.64■□□□□ 0.57
SMG6-214ENST00000573827 MON1AQ86VX9 555 aa18.64■□□□□ 0.57
SMG6-214ENST00000573827 CMTM8Q8IZV2 173 aa18.64■□□□□ 0.57
SMG6-214ENST00000573827 NELL1Q92832 810 aa18.64■□□□□ 0.57
SMG6-214ENST00000573827 USP13Q92995 863 aaPredicted RBP18.64■□□□□ 0.57
SMG6-214ENST00000573827 ZFYVE19Q96K21 471 aa18.64■□□□□ 0.57
SMG6-214ENST00000573827 BCO2Q9BYV7 579 aa18.64■□□□□ 0.57
SMG6-214ENST00000573827 TRAF3IP3Q9Y228 551 aa18.64■□□□□ 0.57
SMG6-214ENST00000573827 ATP6V1DQ9Y5K8 247 aa18.64■□□□□ 0.57
SMG6-214ENST00000573827 MAN2B1O00754 1011 aa18.63■□□□□ 0.57
SMG6-214ENST00000573827 PDGFRBP09619 1106 aa18.63■□□□□ 0.57
SMG6-214ENST00000573827 SOX9P48436 509 aa18.63■□□□□ 0.57
SMG6-214ENST00000573827 NFIL3Q16649 462 aa18.63■□□□□ 0.57
SMG6-214ENST00000573827 WDR72Q3MJ13 1102 aa18.63■□□□□ 0.57
SMG6-214ENST00000573827 ZCWPW2Q504Y3 356 aa18.63■□□□□ 0.57
SMG6-214ENST00000573827 TXNDC8Q6A555 127 aa18.63■□□□□ 0.57
SMG6-214ENST00000573827 TXNDC11Q6PKC3 985 aa18.63■□□□□ 0.57
SMG6-214ENST00000573827 SPATA2LQ8IUW3 424 aaPredicted RBP18.63■□□□□ 0.57
SMG6-214ENST00000573827 MYCBPAPQ8TBZ2 947 aa18.63■□□□□ 0.57
SMG6-214ENST00000573827 CHFRQ96EP1 664 aa18.63■□□□□ 0.57
SMG6-214ENST00000573827 PCED1BQ96HM7 432 aa18.63■□□□□ 0.57
SMG6-214ENST00000573827 FAM83CQ9BQN1 747 aa18.63■□□□□ 0.57
SMG6-214ENST00000573827 DPEP3Q9H4B8 488 aa18.63■□□□□ 0.57
SMG6-214ENST00000573827 PRMT8Q9NR22 394 aaPredicted RBP18.63■□□□□ 0.57
SMG6-214ENST00000573827 ZMYM5Q9UJ78 669 aa18.63■□□□□ 0.57
SMG6-214ENST00000573827 ANAPC1Q9H1A4 1944 aa18.62■□□□□ 0.57
SMG6-214ENST00000573827 ZNF202O95125 648 aa18.62■□□□□ 0.57
SMG6-214ENST00000573827 CHRNB1P11230 501 aa18.62■□□□□ 0.57
SMG6-214ENST00000573827 TDGF1P13385 188 aa18.62■□□□□ 0.57
SMG6-214ENST00000573827 DDX6P26196 483 aaKnown RBP eCLIP18.62■□□□□ 0.57
SMG6-214ENST00000573827 ATICP31939 592 aa18.62■□□□□ 0.57
SMG6-214ENST00000573827 GNL1P36915 607 aaPredicted RBP18.62■□□□□ 0.57
SMG6-214ENST00000573827 CACNA2D1P54289 1103 aa18.62■□□□□ 0.57
SMG6-214ENST00000573827 USP46P62068 366 aa18.62■□□□□ 0.57
SMG6-214ENST00000573827 KCNB1Q14721 858 aa18.62■□□□□ 0.57
SMG6-214ENST00000573827 ZACNQ401N2 412 aa18.62■□□□□ 0.57
SMG6-214ENST00000573827 ARHGAP29Q52LW3 1261 aa18.62■□□□□ 0.57
SMG6-214ENST00000573827 VSTM1Q6UX27 236 aa18.62■□□□□ 0.57
SMG6-214ENST00000573827 MAMSTRQ6ZN01 415 aa18.62■□□□□ 0.57
SMG6-214ENST00000573827 C4orf50Q6ZRC1 276 aa18.62■□□□□ 0.57
SMG6-214ENST00000573827 CELF5Q8N6W0 485 aaKnown RBP18.62■□□□□ 0.57
SMG6-214ENST00000573827 MAB21L3Q8N8X9 362 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms