RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 PI4KAP42356 2102 aa13.15□□□□□ -0.3
PRPF8-208ENST00000573716 GON4LQ3T8J9 2241 aa13.15□□□□□ -0.3
PRPF8-208ENST00000573716 TRAV19A0A0A6YYK7 116 aa13.15□□□□□ -0.3
PRPF8-208ENST00000573716 NPHP3-ACAD11A0A0J9YXS1 232 aa13.15□□□□□ -0.3
PRPF8-208ENST00000573716 OGTO15294 1046 aa13.15□□□□□ -0.3
PRPF8-208ENST00000573716 CYP11A1P05108 521 aa13.15□□□□□ -0.3
PRPF8-208ENST00000573716 ENGP17813 658 aa13.15□□□□□ -0.3
PRPF8-208ENST00000573716 GUCY2CP25092 1073 aa13.15□□□□□ -0.3
PRPF8-208ENST00000573716 RDXP35241 583 aaKnown RBP13.15□□□□□ -0.3
PRPF8-208ENST00000573716 ATXN3P54252 364 aaPredicted RBP13.15□□□□□ -0.3
PRPF8-208ENST00000573716 ZNF268Q14587 947 aaPredicted RBP13.15□□□□□ -0.3
PRPF8-208ENST00000573716 EFCAB13Q8IY85 973 aa13.15□□□□□ -0.3
PRPF8-208ENST00000573716 DCP1BQ8IZD4 617 aaKnown RBP13.15□□□□□ -0.3
PRPF8-208ENST00000573716 CHCHD4Q8N4Q1 142 aa13.15□□□□□ -0.3
PRPF8-208ENST00000573716 C4orf32Q8N8J7 132 aa13.15□□□□□ -0.3
PRPF8-208ENST00000573716 IGSF22Q8N9C0 903 aa13.15□□□□□ -0.3
PRPF8-208ENST00000573716 MDGA1Q8NFP4 955 aa13.15□□□□□ -0.3
PRPF8-208ENST00000573716 CCDC26Q8TAB7 109 aa13.15□□□□□ -0.3
PRPF8-208ENST00000573716 USP33Q8TEY7 942 aa13.15□□□□□ -0.3
PRPF8-208ENST00000573716 SPACA7Q96KW9 195 aa13.15□□□□□ -0.3
PRPF8-208ENST00000573716 CNOT6LQ96LI5 555 aaKnown RBP13.15□□□□□ -0.3
PRPF8-208ENST00000573716 FSCN3Q9NQT6 498 aa13.15□□□□□ -0.3
PRPF8-208ENST00000573716 KCNG1Q9UIX4 513 aa13.15□□□□□ -0.3
PRPF8-208ENST00000573716 ITPR1Q14643 2758 aa13.15□□□□□ -0.3
PRPF8-208ENST00000573716 PCNX2A6NKB5 2137 aa13.15□□□□□ -0.3
PRPF8-208ENST00000573716 GCN1Q92616 2671 aaKnown RBP13.15□□□□□ -0.31
PRPF8-208ENST00000573716 TNRC6BQ9UPQ9 1833 aaKnown RBP13.14□□□□□ -0.31
PRPF8-208ENST00000573716 PTPRDP23468 1912 aa13.14□□□□□ -0.31
PRPF8-208ENST00000573716 ANTXRLA6NF34 631 aa13.14□□□□□ -0.31
PRPF8-208ENST00000573716 H0YCG3 227 aa13.14□□□□□ -0.31
PRPF8-208ENST00000573716 TAF4O00268 1085 aa13.14□□□□□ -0.31
PRPF8-208ENST00000573716 PIRO00625 290 aa13.14□□□□□ -0.31
PRPF8-208ENST00000573716 ALDH1A2O94788 518 aa13.14□□□□□ -0.31
PRPF8-208ENST00000573716 USP17L7P0C7H9 530 aa13.14□□□□□ -0.31
PRPF8-208ENST00000573716 CSH1P0DML2 217 aa13.14□□□□□ -0.31
PRPF8-208ENST00000573716 CSH2P0DML3 217 aa13.14□□□□□ -0.31
PRPF8-208ENST00000573716 PAX3P23760 479 aa13.14□□□□□ -0.31
PRPF8-208ENST00000573716 PTGER3P43115 390 aa13.14□□□□□ -0.31
PRPF8-208ENST00000573716 TAF6P49848 677 aa13.14□□□□□ -0.31
PRPF8-208ENST00000573716 TSPY1Q01534 308 aa13.14□□□□□ -0.31
PRPF8-208ENST00000573716 FAM160A1Q05DH4 1040 aa13.14□□□□□ -0.31
PRPF8-208ENST00000573716 SMARCB1Q12824 385 aa13.14□□□□□ -0.31
PRPF8-208ENST00000573716 ZNF77Q15935 545 aa13.14□□□□□ -0.31
PRPF8-208ENST00000573716 DDR2Q16832 855 aa13.14□□□□□ -0.31
PRPF8-208ENST00000573716 EML3Q32P44 896 aa13.14□□□□□ -0.31
PRPF8-208ENST00000573716 PGBD3Q8N328 593 aa13.14□□□□□ -0.31
PRPF8-208ENST00000573716 HDDC3Q8N4P3 179 aa13.14□□□□□ -0.31
PRPF8-208ENST00000573716 SLC22A12Q96S37 553 aa13.14□□□□□ -0.31
PRPF8-208ENST00000573716 LINC00597Q9H2U6 94 aa13.14□□□□□ -0.31
PRPF8-208ENST00000573716 FOXP1Q9H334 677 aaPredicted RBP13.14□□□□□ -0.31
PRPF8-208ENST00000573716 TMLHEQ9NVH6 421 aa13.14□□□□□ -0.31
PRPF8-208ENST00000573716 EVLQ9UI08 416 aaPredicted RBP13.14□□□□□ -0.31
PRPF8-208ENST00000573716 MMP17Q9ULZ9 603 aa13.14□□□□□ -0.31
PRPF8-208ENST00000573716 DMXL2Q8TDJ6 3036 aa13.14□□□□□ -0.31
PRPF8-208ENST00000573716 USP4Q13107 963 aa13.13□□□□□ -0.31
PRPF8-208ENST00000573716 KCNB1Q14721 858 aa13.13□□□□□ -0.31
PRPF8-208ENST00000573716 ZC2HC1CQ53FD0 456 aaPredicted RBP13.13□□□□□ -0.31
PRPF8-208ENST00000573716 RASSF3Q86WH2 238 aa13.13□□□□□ -0.31
PRPF8-208ENST00000573716 SYT12Q8IV01 421 aa13.13□□□□□ -0.31
PRPF8-208ENST00000573716 FRMD1Q8N878 549 aa13.13□□□□□ -0.31
PRPF8-208ENST00000573716 ARL14EPQ8N8R7 260 aaPredicted RBP13.13□□□□□ -0.31
PRPF8-208ENST00000573716 SH3RF2Q8TEC5 729 aa13.13□□□□□ -0.31
PRPF8-208ENST00000573716 HMGB4Q8WW32 186 aa13.13□□□□□ -0.31
PRPF8-208ENST00000573716 CDK5RAP3Q96JB5 506 aa13.13□□□□□ -0.31
PRPF8-208ENST00000573716 TSPAN18Q96SJ8 248 aa13.13□□□□□ -0.31
PRPF8-208ENST00000573716 TMEM74BQ9NUR3 256 aa13.13□□□□□ -0.31
PRPF8-208ENST00000573716 DPP3Q9NY33 737 aa13.13□□□□□ -0.31
PRPF8-208ENST00000573716 LARSQ9P2J5 1176 aaKnown RBP13.13□□□□□ -0.31
PRPF8-208ENST00000573716 UXTQ9UBK9 157 aaPredicted RBP13.13□□□□□ -0.31
PRPF8-208ENST00000573716 MBD1Q9UIS9 605 aaPredicted RBP13.13□□□□□ -0.31
PRPF8-208ENST00000573716 PCDHB6Q9Y5E3 794 aa13.13□□□□□ -0.31
PRPF8-208ENST00000573716 HELZP42694 1942 aaKnown RBP13.13□□□□□ -0.31
PRPF8-208ENST00000573716 CEP192Q8TEP8 1941 aa13.12□□□□□ -0.31
PRPF8-208ENST00000573716 ANAPC1Q9H1A4 1944 aa13.12□□□□□ -0.31
PRPF8-208ENST00000573716 ANO9A1A5B4 782 aa13.12□□□□□ -0.31
PRPF8-208ENST00000573716 K7ENM7 598 aa13.12□□□□□ -0.31
PRPF8-208ENST00000573716 K7EQS6 105 aa13.12□□□□□ -0.31
PRPF8-208ENST00000573716 TNFRSF10BO14763 440 aa13.12□□□□□ -0.31
PRPF8-208ENST00000573716 FAM189A1O60320 539 aa13.12□□□□□ -0.31
PRPF8-208ENST00000573716 TADA3O75528 432 aa13.12□□□□□ -0.31
PRPF8-208ENST00000573716 KLF8O95600 359 aaPredicted RBP13.12□□□□□ -0.31
PRPF8-208ENST00000573716 NFATC1O95644 943 aa13.12□□□□□ -0.31
PRPF8-208ENST00000573716 CYP2F1P24903 491 aa13.12□□□□□ -0.31
PRPF8-208ENST00000573716 TRAPPC10P48553 1259 aa13.12□□□□□ -0.31
PRPF8-208ENST00000573716 ACOT2P49753 483 aa13.12□□□□□ -0.31
PRPF8-208ENST00000573716 NEK4P51957 841 aa13.12□□□□□ -0.31
PRPF8-208ENST00000573716 NCKAP1LP55160 1127 aa13.12□□□□□ -0.31
PRPF8-208ENST00000573716 RPL10AP62906 217 aaKnown RBP13.12□□□□□ -0.31
PRPF8-208ENST00000573716 CRY1Q16526 586 aa13.12□□□□□ -0.31
PRPF8-208ENST00000573716 IL17AQ16552 155 aa13.12□□□□□ -0.31
PRPF8-208ENST00000573716 LYSMD4Q5XG99 296 aa13.12□□□□□ -0.31
PRPF8-208ENST00000573716 LMBRD2Q68DH5 695 aaPredicted RBP13.12□□□□□ -0.31
PRPF8-208ENST00000573716 TMEM92Q6UXU6 159 aa13.12□□□□□ -0.31
PRPF8-208ENST00000573716 DTHD1Q6ZMT9 781 aa13.12□□□□□ -0.31
PRPF8-208ENST00000573716 SCN4BQ8IWT1 228 aa13.12□□□□□ -0.31
PRPF8-208ENST00000573716 CD302Q8IX05 232 aa13.12□□□□□ -0.31
PRPF8-208ENST00000573716 DEFB119Q8N690 84 aa13.12□□□□□ -0.31
PRPF8-208ENST00000573716 ALLCQ8N6M5 410 aa13.12□□□□□ -0.31
PRPF8-208ENST00000573716 SPRYD3Q8NCJ5 442 aa13.12□□□□□ -0.31
PRPF8-208ENST00000573716 WHAMMQ8TF30 809 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms