RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 ELMO3Q96BJ8 720 aa18.54■□□□□ 0.56
SMG6-212ENST00000573153 TRMT2BQ96GJ1 504 aaKnown RBP18.54■□□□□ 0.56
SMG6-212ENST00000573153 FUBP3Q96I24 572 aaKnown RBP eCLIP18.54■□□□□ 0.56
SMG6-212ENST00000573153 SYT15Q9BQS2 421 aa18.54■□□□□ 0.56
SMG6-212ENST00000573153 SMG9Q9H0W8 520 aaKnown RBP18.54■□□□□ 0.56
SMG6-212ENST00000573153 BRD9Q9H8M2 597 aa18.54■□□□□ 0.56
SMG6-212ENST00000573153 OBP2AQ9NY56 170 aa18.54■□□□□ 0.56
SMG6-212ENST00000573153 TRAF3IP3Q9Y228 551 aa18.54■□□□□ 0.56
SMG6-212ENST00000573153 ANAPC1Q9H1A4 1944 aa18.54■□□□□ 0.56
SMG6-212ENST00000573153 FAM170BA6NMN3 283 aa18.53■□□□□ 0.56
SMG6-212ENST00000573153 STK25O00506 426 aa18.53■□□□□ 0.56
SMG6-212ENST00000573153 PDXKO00764 312 aa18.53■□□□□ 0.56
SMG6-212ENST00000573153 ZNF202O95125 648 aa18.53■□□□□ 0.56
SMG6-212ENST00000573153 FGF19O95750 216 aa18.53■□□□□ 0.56
SMG6-212ENST00000573153 CDC25CP30307 473 aa18.53■□□□□ 0.56
SMG6-212ENST00000573153 MAGEA11P43364 429 aa18.53■□□□□ 0.56
SMG6-212ENST00000573153 CACNA2D1P54289 1103 aa18.53■□□□□ 0.56
SMG6-212ENST00000573153 MYO1EQ12965 1108 aa18.53■□□□□ 0.56
SMG6-212ENST00000573153 KCNB1Q14721 858 aa18.53■□□□□ 0.56
SMG6-212ENST00000573153 VEPH1Q14D04 833 aa18.53■□□□□ 0.56
SMG6-212ENST00000573153 C1orf210Q8IVY1 113 aa18.53■□□□□ 0.56
SMG6-212ENST00000573153 IRF7Q92985 503 aa18.53■□□□□ 0.56
SMG6-212ENST00000573153 SDCBP2Q9H190 292 aa18.53■□□□□ 0.56
SMG6-212ENST00000573153 DPEP3Q9H4B8 488 aa18.53■□□□□ 0.56
SMG6-212ENST00000573153 SLITRK6Q9H5Y7 841 aa18.53■□□□□ 0.56
SMG6-212ENST00000573153 CDH9Q9ULB4 789 aa18.53■□□□□ 0.56
SMG6-212ENST00000573153 CCL26Q9Y258 94 aa18.53■□□□□ 0.56
SMG6-212ENST00000573153 ZFHX2Q9C0A1 2572 aaPredicted RBP18.53■□□□□ 0.56
SMG6-212ENST00000573153 SLC38A8A6NNN8 435 aa18.52■□□□□ 0.56
SMG6-212ENST00000573153 CHADO15335 359 aa18.52■□□□□ 0.56
SMG6-212ENST00000573153 GFRA3O60609 400 aa18.52■□□□□ 0.56
SMG6-212ENST00000573153 EXOC3O60645 756 aa18.52■□□□□ 0.56
SMG6-212ENST00000573153 NR3C1P04150 777 aa18.52■□□□□ 0.56
SMG6-212ENST00000573153 SP9P0CG40 484 aa18.52■□□□□ 0.56
SMG6-212ENST00000573153 TNNI1P19237 187 aa18.52■□□□□ 0.56
SMG6-212ENST00000573153 PCSK1P29120 753 aa18.52■□□□□ 0.56
SMG6-212ENST00000573153 RPS9P46781 194 aaKnown RBP18.52■□□□□ 0.56
SMG6-212ENST00000573153 UBXN2BQ14CS0 331 aa18.52■□□□□ 0.56
SMG6-212ENST00000573153 TXNDC11Q6PKC3 985 aa18.52■□□□□ 0.56
SMG6-212ENST00000573153 ENGASEQ8NFI3 743 aa18.52■□□□□ 0.56
SMG6-212ENST00000573153 FAM200AQ8TCP9 573 aa18.52■□□□□ 0.56
SMG6-212ENST00000573153 NELL1Q92832 810 aa18.52■□□□□ 0.56
SMG6-212ENST00000573153 USP13Q92995 863 aaPredicted RBP18.52■□□□□ 0.56
SMG6-212ENST00000573153 E2F7Q96AV8 911 aa18.52■□□□□ 0.56
SMG6-212ENST00000573153 PCED1BQ96HM7 432 aa18.52■□□□□ 0.56
SMG6-212ENST00000573153 ZFYVE19Q96K21 471 aa18.52■□□□□ 0.56
SMG6-212ENST00000573153 FNBP1Q96RU3 617 aa18.52■□□□□ 0.56
SMG6-212ENST00000573153 CFAP54Q96N23 3096 aa18.51■□□□□ 0.55
SMG6-212ENST00000573153 KIF20AO95235 890 aa18.51■□□□□ 0.55
SMG6-212ENST00000573153 FAM163BP0C2L3 166 aa18.51■□□□□ 0.55
SMG6-212ENST00000573153 CSH1P0DML2 217 aa18.51■□□□□ 0.55
SMG6-212ENST00000573153 CSH2P0DML3 217 aa18.51■□□□□ 0.55
SMG6-212ENST00000573153 TDGF1P13385 188 aa18.51■□□□□ 0.55
SMG6-212ENST00000573153 SOX9P48436 509 aa18.51■□□□□ 0.55
SMG6-212ENST00000573153 MLLT6P55198 1093 aaPredicted RBP18.51■□□□□ 0.55
SMG6-212ENST00000573153 USP46P62068 366 aa18.51■□□□□ 0.55
SMG6-212ENST00000573153 GAS6Q14393 721 aa18.51■□□□□ 0.55
SMG6-212ENST00000573153 NFIL3Q16649 462 aa18.51■□□□□ 0.55
SMG6-212ENST00000573153 ZACNQ401N2 412 aa18.51■□□□□ 0.55
SMG6-212ENST00000573153 TXNDC8Q6A555 127 aa18.51■□□□□ 0.55
SMG6-212ENST00000573153 CMTM8Q8IZV2 173 aa18.51■□□□□ 0.55
SMG6-212ENST00000573153 FMR1NBQ8N0W7 255 aaPredicted RBP18.51■□□□□ 0.55
SMG6-212ENST00000573153 CCDC47Q96A33 483 aaKnown RBP18.51■□□□□ 0.55
SMG6-212ENST00000573153 SLC22A12Q96S37 553 aa18.51■□□□□ 0.55
SMG6-212ENST00000573153 SMYD3Q9H7B4 428 aa18.51■□□□□ 0.55
SMG6-212ENST00000573153 PIAS3Q9Y6X2 628 aa18.51■□□□□ 0.55
SMG6-212ENST00000573153 TULP1O00294 542 aaPredicted RBP18.5■□□□□ 0.55
SMG6-212ENST00000573153 ZNF263O14978 683 aa18.5■□□□□ 0.55
SMG6-212ENST00000573153 PDGFRBP09619 1106 aa18.5■□□□□ 0.55
SMG6-212ENST00000573153 CHRNB1P11230 501 aa18.5■□□□□ 0.55
SMG6-212ENST00000573153 AP3M2P53677 418 aa18.5■□□□□ 0.55
SMG6-212ENST00000573153 WDR72Q3MJ13 1102 aa18.5■□□□□ 0.55
SMG6-212ENST00000573153 ZNF852Q6ZMS4 543 aa18.5■□□□□ 0.55
SMG6-212ENST00000573153 MON1AQ86VX9 555 aa18.5■□□□□ 0.55
SMG6-212ENST00000573153 MYCBPAPQ8TBZ2 947 aa18.5■□□□□ 0.55
SMG6-212ENST00000573153 CCDC34Q96HJ3 373 aa18.5■□□□□ 0.55
SMG6-212ENST00000573153 FAM83CQ9BQN1 747 aa18.5■□□□□ 0.55
SMG6-212ENST00000573153 CHRDQ9H2X0 955 aa18.5■□□□□ 0.55
SMG6-212ENST00000573153 HPS4Q9NQG7 708 aa18.5■□□□□ 0.55
SMG6-212ENST00000573153 PRMT8Q9NR22 394 aaPredicted RBP18.5■□□□□ 0.55
SMG6-212ENST00000573153 GCNT4Q9P109 453 aa18.5■□□□□ 0.55
SMG6-212ENST00000573153 R3HCC1Q9Y3T6 440 aaKnown RBP18.5■□□□□ 0.55
SMG6-212ENST00000573153 OTOL1A6NHN0 477 aaPredicted RBP18.49■□□□□ 0.55
SMG6-212ENST00000573153 SOBPA7XYQ1 873 aa18.49■□□□□ 0.55
SMG6-212ENST00000573153 MAPK13O15264 365 aa18.49■□□□□ 0.55
SMG6-212ENST00000573153 AKAP3O75969 853 aa18.49■□□□□ 0.55
SMG6-212ENST00000573153 RFX1P22670 979 aa18.49■□□□□ 0.55
SMG6-212ENST00000573153 BDNFP23560 247 aa18.49■□□□□ 0.55
SMG6-212ENST00000573153 ATICP31939 592 aa18.49■□□□□ 0.55
SMG6-212ENST00000573153 RPL10AP62906 217 aaKnown RBP18.49■□□□□ 0.55
SMG6-212ENST00000573153 ZXDBP98169 803 aa18.49■□□□□ 0.55
SMG6-212ENST00000573153 TNK2Q07912 1038 aa18.49■□□□□ 0.55
SMG6-212ENST00000573153 ARHGAP15Q53QZ3 475 aa18.49■□□□□ 0.55
SMG6-212ENST00000573153 PAQR9Q6ZVX9 377 aa18.49■□□□□ 0.55
SMG6-212ENST00000573153 SPATA2LQ8IUW3 424 aaPredicted RBP18.49■□□□□ 0.55
SMG6-212ENST00000573153 GUF1Q8N442 669 aaKnown RBP18.49■□□□□ 0.55
SMG6-212ENST00000573153 MAB21L3Q8N8X9 362 aa18.49■□□□□ 0.55
SMG6-212ENST00000573153 TMC2Q8TDI7 906 aa18.49■□□□□ 0.55
SMG6-212ENST00000573153 BPIFB1Q8TDL5 484 aa18.49■□□□□ 0.55
SMG6-212ENST00000573153 SPATA17Q96L03 361 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms