RNA–Protein interactions for RNA: ENST00000573095.1

HCFC1R1-204, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3

Gene HCFC1R1, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-204ENST00000573095 PON2Q15165 354 aa20.74■□□□□ 0.91
HCFC1R1-204ENST00000573095 CCDC142Q17RM4 750 aa20.74■□□□□ 0.91
HCFC1R1-204ENST00000573095 SOWAHAQ2M3V2 549 aa20.74■□□□□ 0.91
HCFC1R1-204ENST00000573095 FAM26FQ5R3K3 315 aa20.74■□□□□ 0.91
HCFC1R1-204ENST00000573095 SDHAF4Q5VUM1 108 aa20.74■□□□□ 0.91
HCFC1R1-204ENST00000573095 SHC4Q6S5L8 630 aa20.74■□□□□ 0.91
HCFC1R1-204ENST00000573095 WDR49Q8IV35 697 aa20.74■□□□□ 0.91
HCFC1R1-204ENST00000573095 SYNPOQ8N3V7 929 aa20.74■□□□□ 0.91
HCFC1R1-204ENST00000573095 IQUBQ8NA54 791 aa20.74■□□□□ 0.91
HCFC1R1-204ENST00000573095 OR5B17Q8NGF7 314 aa20.74■□□□□ 0.91
HCFC1R1-204ENST00000573095 USP13Q92995 863 aaPredicted RBP20.74■□□□□ 0.91
HCFC1R1-204ENST00000573095 MYRFLQ96LU7 910 aa20.74■□□□□ 0.91
HCFC1R1-204ENST00000573095 FAM83CQ9BQN1 747 aa20.74■□□□□ 0.91
HCFC1R1-204ENST00000573095 KIAA1586Q9HCI6 787 aa20.74■□□□□ 0.91
HCFC1R1-204ENST00000573095 DLL3Q9NYJ7 618 aa20.74■□□□□ 0.91
HCFC1R1-204ENST00000573095 TFIP11Q9UBB9 837 aaKnown RBP20.74■□□□□ 0.91
HCFC1R1-204ENST00000573095 GTF3C4Q9UKN8 822 aa20.74■□□□□ 0.91
HCFC1R1-204ENST00000573095 MAGED2Q9UNF1 606 aaPredicted RBP20.74■□□□□ 0.91
HCFC1R1-204ENST00000573095 CCL26Q9Y258 94 aa20.74■□□□□ 0.91
HCFC1R1-204ENST00000573095 R3HCC1Q9Y3T6 440 aaKnown RBP20.74■□□□□ 0.91
HCFC1R1-204ENST00000573095 FRYLO94915 3013 aa20.74■□□□□ 0.91
HCFC1R1-204ENST00000573095 HCRTO43612 131 aa20.73■□□□□ 0.91
HCFC1R1-204ENST00000573095 ZNF268Q14587 947 aaPredicted RBP20.73■□□□□ 0.91
HCFC1R1-204ENST00000573095 PUM1Q14671 1186 aaKnown RBP eCLIP20.73■□□□□ 0.91
HCFC1R1-204ENST00000573095 DDR2Q16832 855 aa20.73■□□□□ 0.91
HCFC1R1-204ENST00000573095 TXNDC8Q6A555 127 aa20.73■□□□□ 0.91
HCFC1R1-204ENST00000573095 MON1AQ86VX9 555 aa20.73■□□□□ 0.91
HCFC1R1-204ENST00000573095 SPATA2LQ8IUW3 424 aaPredicted RBP20.73■□□□□ 0.91
HCFC1R1-204ENST00000573095 ZNF507Q8TCN5 953 aa20.73■□□□□ 0.91
HCFC1R1-204ENST00000573095 KBTBD7Q8WVZ9 684 aa20.73■□□□□ 0.91
HCFC1R1-204ENST00000573095 HPDLQ96IR7 371 aa20.73■□□□□ 0.91
HCFC1R1-204ENST00000573095 HPS4Q9NQG7 708 aa20.73■□□□□ 0.91
HCFC1R1-204ENST00000573095 TDP1Q9NUW8 608 aa20.73■□□□□ 0.91
HCFC1R1-204ENST00000573095 GMEB2Q9UKD1 530 aa20.73■□□□□ 0.91
HCFC1R1-204ENST00000573095 K7ESF4 209 aa20.72■□□□□ 0.91
HCFC1R1-204ENST00000573095 PDIA4P13667 645 aaKnown RBP20.72■□□□□ 0.91
HCFC1R1-204ENST00000573095 MAGEA11P43364 429 aa20.72■□□□□ 0.91
HCFC1R1-204ENST00000573095 EHHADHQ08426 723 aa20.72■□□□□ 0.91
HCFC1R1-204ENST00000573095 RUNX3Q13761 415 aa20.72■□□□□ 0.91
HCFC1R1-204ENST00000573095 DUOXA2Q1HG44 320 aa20.72■□□□□ 0.91
HCFC1R1-204ENST00000573095 FAM171BQ6P995 826 aa20.72■□□□□ 0.91
HCFC1R1-204ENST00000573095 C7orf25Q9BPX7 421 aa20.72■□□□□ 0.91
HCFC1R1-204ENST00000573095 SYT15Q9BQS2 421 aa20.72■□□□□ 0.91
HCFC1R1-204ENST00000573095 AGPAT3Q9NRZ7 376 aa20.72■□□□□ 0.91
HCFC1R1-204ENST00000573095 GKN1Q9NS71 199 aa20.72■□□□□ 0.91
HCFC1R1-204ENST00000573095 CEP250Q9BV73 2442 aa20.72■□□□□ 0.91
HCFC1R1-204ENST00000573095 TGFB1I1O43294 461 aa20.71■□□□□ 0.91
HCFC1R1-204ENST00000573095 SNRPFP62306 86 aaKnown RBP20.71■□□□□ 0.91
HCFC1R1-204ENST00000573095 SNRNP35Q16560 246 aaKnown RBP20.71■□□□□ 0.91
HCFC1R1-204ENST00000573095 LAIR1Q6GTX8 287 aa20.71■□□□□ 0.91
HCFC1R1-204ENST00000573095 C4orf50Q6ZRC1 276 aa20.71■□□□□ 0.91
HCFC1R1-204ENST00000573095 UNC13DQ70J99 1090 aa20.71■□□□□ 0.91
HCFC1R1-204ENST00000573095 DGLUCYQ7Z3D6 616 aa20.71■□□□□ 0.91
HCFC1R1-204ENST00000573095 RIN3Q8TB24 985 aa20.71■□□□□ 0.91
HCFC1R1-204ENST00000573095 CDH9Q9ULB4 789 aa20.71■□□□□ 0.91
HCFC1R1-204ENST00000573095 RAB23Q9ULC3 237 aa20.71■□□□□ 0.91
HCFC1R1-204ENST00000573095 KIAA1549LQ6ZVL6 1849 aa20.7■□□□□ 0.9
HCFC1R1-204ENST00000573095 WARSP23381 471 aaKnown RBP20.7■□□□□ 0.9
HCFC1R1-204ENST00000573095 FAM160A1Q05DH4 1040 aa20.7■□□□□ 0.9
HCFC1R1-204ENST00000573095 USP4Q13107 963 aa20.7■□□□□ 0.9
HCFC1R1-204ENST00000573095 MAPRE1Q15691 268 aaKnown RBP20.7■□□□□ 0.9
HCFC1R1-204ENST00000573095 TMEM196Q5HYL7 178 aa20.7■□□□□ 0.9
HCFC1R1-204ENST00000573095 TRIM68Q6AZZ1 485 aa20.7■□□□□ 0.9
HCFC1R1-204ENST00000573095 LONP2Q86WA8 852 aa20.7■□□□□ 0.9
HCFC1R1-204ENST00000573095 SCFD1Q8WVM8 642 aa20.7■□□□□ 0.9
HCFC1R1-204ENST00000573095 MYLPFQ96A32 169 aa20.7■□□□□ 0.9
HCFC1R1-204ENST00000573095 CHFRQ96EP1 664 aa20.7■□□□□ 0.9
HCFC1R1-204ENST00000573095 CEP295NLQ96MC4 621 aa20.7■□□□□ 0.9
HCFC1R1-204ENST00000573095 EBF3Q9H4W6 596 aa20.7■□□□□ 0.9
HCFC1R1-204ENST00000573095 CHURC1-FNTBB4DL54 471 aa20.69■□□□□ 0.9
HCFC1R1-204ENST00000573095 F13A1P00488 732 aa20.69■□□□□ 0.9
HCFC1R1-204ENST00000573095 ZSCAN22P10073 491 aaPredicted RBP20.69■□□□□ 0.9
HCFC1R1-204ENST00000573095 TGM1P22735 817 aa20.69■□□□□ 0.9
HCFC1R1-204ENST00000573095 HOXA6P31267 233 aa20.69■□□□□ 0.9
HCFC1R1-204ENST00000573095 CNR2P34972 360 aa20.69■□□□□ 0.9
HCFC1R1-204ENST00000573095 FNTBP49356 437 aa20.69■□□□□ 0.9
HCFC1R1-204ENST00000573095 PSMC1P62191 440 aaKnown RBP20.69■□□□□ 0.9
HCFC1R1-204ENST00000573095 LMNB2Q03252 620 aa20.69■□□□□ 0.9
HCFC1R1-204ENST00000573095 DMWDQ09019 674 aa20.69■□□□□ 0.9
HCFC1R1-204ENST00000573095 PSMD6Q15008 389 aa20.69■□□□□ 0.9
HCFC1R1-204ENST00000573095 PDGFRLQ15198 375 aa20.69■□□□□ 0.9
HCFC1R1-204ENST00000573095 ZNF77Q15935 545 aa20.69■□□□□ 0.9
HCFC1R1-204ENST00000573095 BMT2Q1RMZ1 405 aa20.69■□□□□ 0.9
HCFC1R1-204ENST00000573095 RSPO4Q2I0M5 234 aaPredicted RBP20.69■□□□□ 0.9
HCFC1R1-204ENST00000573095 CC2D1AQ6P1N0 951 aaPredicted RBP20.69■□□□□ 0.9
HCFC1R1-204ENST00000573095 VSTM1Q6UX27 236 aa20.69■□□□□ 0.9
HCFC1R1-204ENST00000573095 TRAPPC11Q7Z392 1133 aa20.69■□□□□ 0.9
HCFC1R1-204ENST00000573095 SCN4BQ8IWT1 228 aa20.69■□□□□ 0.9
HCFC1R1-204ENST00000573095 CGRRF1Q99675 332 aa20.69■□□□□ 0.9
HCFC1R1-204ENST00000573095 CRTAC1Q9NQ79 661 aa20.69■□□□□ 0.9
HCFC1R1-204ENST00000573095 C2orf42Q9NWW7 574 aa20.69■□□□□ 0.9
HCFC1R1-204ENST00000573095 WDR87Q6ZQQ6 2873 aa20.69■□□□□ 0.9
HCFC1R1-204ENST00000573095 MYO16Q9Y6X6 1858 aa20.69■□□□□ 0.9
HCFC1R1-204ENST00000573095 DNAH14Q0VDD8 3507 aa20.68■□□□□ 0.9
HCFC1R1-204ENST00000573095 TRAV19A0A0A6YYK7 116 aa20.68■□□□□ 0.9
HCFC1R1-204ENST00000573095 OTOL1A6NHN0 477 aaPredicted RBP20.68■□□□□ 0.9
HCFC1R1-204ENST00000573095 TRDMT1O14717 391 aaKnown RBP20.68■□□□□ 0.9
HCFC1R1-204ENST00000573095 POLR2DO15514 142 aaKnown RBP20.68■□□□□ 0.9
HCFC1R1-204ENST00000573095 ATP2C2O75185 946 aa20.68■□□□□ 0.9
HCFC1R1-204ENST00000573095 LMO2P25791 158 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms