RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 TMEM184AQ6ZMB5 413 aa15.42■□□□□ 0.06
NPLOC4-209ENST00000572760 SCN4BQ8IWT1 228 aa15.42■□□□□ 0.06
NPLOC4-209ENST00000572760 C12orf29Q8N999 325 aa15.42■□□□□ 0.06
NPLOC4-209ENST00000572760 SLC4A11Q8NBS3 891 aa15.42■□□□□ 0.06
NPLOC4-209ENST00000572760 SLC2A14Q8TDB8 520 aa15.42■□□□□ 0.06
NPLOC4-209ENST00000572760 SHC3Q92529 594 aa15.42■□□□□ 0.06
NPLOC4-209ENST00000572760 NUP58Q9BVL2 599 aa15.42■□□□□ 0.06
NPLOC4-209ENST00000572760 B3GNT5Q9BYG0 378 aa15.42■□□□□ 0.06
NPLOC4-209ENST00000572760 SFXN1Q9H9B4 322 aa15.42■□□□□ 0.06
NPLOC4-209ENST00000572760 PIDD1Q9HB75 910 aa15.42■□□□□ 0.06
NPLOC4-209ENST00000572760 ABCB6Q9NP58 842 aa15.42■□□□□ 0.06
NPLOC4-209ENST00000572760 HSFX1Q9UBD0 423 aa15.42■□□□□ 0.06
NPLOC4-209ENST00000572760 AJAP1Q9UKB5 411 aaPredicted RBP15.42■□□□□ 0.06
NPLOC4-209ENST00000572760 INSL5Q9Y5Q6 135 aa15.42■□□□□ 0.06
NPLOC4-209ENST00000572760 GREB1Q4ZG55 1949 aa15.42■□□□□ 0.06
NPLOC4-209ENST00000572760 RNF225M0QZC1 329 aaPredicted RBP15.41■□□□□ 0.06
NPLOC4-209ENST00000572760 FOXN3O00409 490 aaPredicted RBP15.41■□□□□ 0.06
NPLOC4-209ENST00000572760 CLDN5O00501 218 aa15.41■□□□□ 0.06
NPLOC4-209ENST00000572760 NOL4O94818 638 aa15.41■□□□□ 0.06
NPLOC4-209ENST00000572760 HAPLN1P10915 354 aaPredicted RBP15.41■□□□□ 0.06
NPLOC4-209ENST00000572760 VDRP11473 427 aa15.41■□□□□ 0.06
NPLOC4-209ENST00000572760 CCDC130P13994 396 aa15.41■□□□□ 0.06
NPLOC4-209ENST00000572760 HOXB8P17481 243 aaPredicted RBP15.41■□□□□ 0.06
NPLOC4-209ENST00000572760 CYP2F1P24903 491 aa15.41■□□□□ 0.06
NPLOC4-209ENST00000572760 ANXA13P27216 316 aa15.41■□□□□ 0.06
NPLOC4-209ENST00000572760 GRIK1P39086 918 aa15.41■□□□□ 0.06
NPLOC4-209ENST00000572760 STAT1P42224 750 aa15.41■□□□□ 0.06
NPLOC4-209ENST00000572760 EPHB3P54753 998 aa15.41■□□□□ 0.06
NPLOC4-209ENST00000572760 RPL10AP62906 217 aaKnown RBP15.41■□□□□ 0.06
NPLOC4-209ENST00000572760 PTK2Q05397 1052 aa15.41■□□□□ 0.06
NPLOC4-209ENST00000572760 VEPH1Q14D04 833 aa15.41■□□□□ 0.06
NPLOC4-209ENST00000572760 TAF12Q16514 161 aa15.41■□□□□ 0.06
NPLOC4-209ENST00000572760 CTC1Q2NKJ3 1217 aa15.41■□□□□ 0.06
NPLOC4-209ENST00000572760 CFAP221Q4G0U5 840 aa15.41■□□□□ 0.06
NPLOC4-209ENST00000572760 RARS2Q5T160 578 aaKnown RBP15.41■□□□□ 0.06
NPLOC4-209ENST00000572760 DPY19L2P1Q6NXN4 242 aa15.41■□□□□ 0.06
NPLOC4-209ENST00000572760 SARM1Q6SZW1 724 aa15.41■□□□□ 0.06
NPLOC4-209ENST00000572760 VSTM1Q6UX27 236 aa15.41■□□□□ 0.06
NPLOC4-209ENST00000572760 RTL10Q7L3V2 364 aa15.41■□□□□ 0.06
NPLOC4-209ENST00000572760 ELMOD1Q8N336 334 aa15.41■□□□□ 0.06
NPLOC4-209ENST00000572760 C12orf76Q8N812 135 aaPredicted RBP15.41■□□□□ 0.06
NPLOC4-209ENST00000572760 HLA-CQ95604 372 aa15.41■□□□□ 0.06
NPLOC4-209ENST00000572760 APOL5Q9BWW9 433 aa15.41■□□□□ 0.06
NPLOC4-209ENST00000572760 UBE2ZQ9H832 354 aaPredicted RBP15.41■□□□□ 0.06
NPLOC4-209ENST00000572760 ZDHHC7Q9NXF8 308 aa15.41■□□□□ 0.06
NPLOC4-209ENST00000572760 CEP72Q9P209 647 aa15.41■□□□□ 0.06
NPLOC4-209ENST00000572760 YIPF1Q9Y548 306 aa15.41■□□□□ 0.06
NPLOC4-209ENST00000572760 CCDC195A0A1B0GUA6 201 aa15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 EPHB6O15197 1021 aa15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 CCL16O15467 120 aa15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 XYLBO75191 536 aa15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 TBX10O75333 385 aa15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 RFPL2O75678 378 aa15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 AP1G2O75843 785 aa15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 VNN2O95498 520 aa15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 HNRNPA1P09651 372 aaKnown RBP eCLIP15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 KCNA5P22460 613 aa15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 GNA15P30679 374 aa15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 SLC8A3P57103 927 aa15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 BPIFB4P59827 614 aa15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 DLX2Q07687 328 aaPredicted RBP15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 TWF1Q12792 350 aa15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 CLUL1Q15846 466 aa15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 PPP1R26Q5T8A7 1209 aaPredicted RBP15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 SMYD5Q6GMV2 418 aa15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 CES5AQ6NT32 575 aa15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 TMC5Q6UXY8 1006 aa15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 FAM35AQ86V20 835 aa15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 TTC9BQ8N6N2 239 aa15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 SMARCD1Q96GM5 515 aa15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 ZNF512Q96ME7 567 aaPredicted RBP15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 HNRNPABQ99729 332 aaKnown RBP15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 NAA15Q9BXJ9 866 aaKnown RBP15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 RHOBTB2Q9BYZ6 727 aa15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 ZNF518BQ9C0D4 1074 aa15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 CRISPLD1Q9H336 500 aa15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 HESX1Q9UBX0 185 aa15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 CD207Q9UJ71 328 aa15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 COG5Q9UP83 839 aa15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 CNTN6Q9UQ52 1028 aa15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.4■□□□□ 0.06
NPLOC4-209ENST00000572760 F8VZ95 297 aa15.39■□□□□ 0.05
NPLOC4-209ENST00000572760 H3BQ06 376 aaPredicted RBP15.39■□□□□ 0.05
NPLOC4-209ENST00000572760 TRIM66O15016 1216 aa15.39■□□□□ 0.05
NPLOC4-209ENST00000572760 CYP26A1O43174 497 aa15.39■□□□□ 0.05
NPLOC4-209ENST00000572760 THAP12O43422 761 aa15.39■□□□□ 0.05
NPLOC4-209ENST00000572760 MED7O43513 233 aa15.39■□□□□ 0.05
NPLOC4-209ENST00000572760 SOAT2O75908 522 aa15.39■□□□□ 0.05
NPLOC4-209ENST00000572760 FAM200BP0CF97 657 aa15.39■□□□□ 0.05
NPLOC4-209ENST00000572760 PNMA6AP0CW24 399 aaPredicted RBP15.39■□□□□ 0.05
NPLOC4-209ENST00000572760 BRD2P25440 801 aaKnown RBP15.39■□□□□ 0.05
NPLOC4-209ENST00000572760 HOXA9P31269 272 aa15.39■□□□□ 0.05
NPLOC4-209ENST00000572760 LTBRP36941 435 aa15.39■□□□□ 0.05
NPLOC4-209ENST00000572760 MAGEA11P43364 429 aa15.39■□□□□ 0.05
NPLOC4-209ENST00000572760 ZNF132P52740 706 aa15.39■□□□□ 0.05
NPLOC4-209ENST00000572760 COL19A1Q14993 1142 aa15.39■□□□□ 0.05
NPLOC4-209ENST00000572760 STILQ15468 1287 aa15.39■□□□□ 0.05
NPLOC4-209ENST00000572760 DDR2Q16832 855 aa15.39■□□□□ 0.05
NPLOC4-209ENST00000572760 GOLGA7BQ2TAP0 167 aa15.39■□□□□ 0.05
NPLOC4-209ENST00000572760 ARHGAP17Q68EM7 881 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms