RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 PMS1P54277 932 aaKnown RBP17.24■□□□□ 0.35
NDE1-205ENST00000572756 CDH8P55286 799 aa17.24■□□□□ 0.35
NDE1-205ENST00000572756 RPL10AP62906 217 aaKnown RBP17.24■□□□□ 0.35
NDE1-205ENST00000572756 SGSM1Q2NKQ1 1148 aa17.24■□□□□ 0.35
NDE1-205ENST00000572756 ZNF667Q5HYK9 610 aa17.24■□□□□ 0.35
NDE1-205ENST00000572756 VITQ6UXI7 678 aa17.24■□□□□ 0.35
NDE1-205ENST00000572756 STKLD1Q8NE28 680 aa17.24■□□□□ 0.35
NDE1-205ENST00000572756 PRSS33Q8NF86 280 aa17.24■□□□□ 0.35
NDE1-205ENST00000572756 FLCNQ8NFG4 579 aa17.24■□□□□ 0.35
NDE1-205ENST00000572756 OR6B3Q8NGW1 331 aa17.24■□□□□ 0.35
NDE1-205ENST00000572756 MYCBPAPQ8TBZ2 947 aa17.24■□□□□ 0.35
NDE1-205ENST00000572756 TAF4BQ92750 862 aa17.24■□□□□ 0.35
NDE1-205ENST00000572756 EEF2KMTQ96G04 330 aa17.24■□□□□ 0.35
NDE1-205ENST00000572756 PCED1BQ96HM7 432 aa17.24■□□□□ 0.35
NDE1-205ENST00000572756 SDCBP2Q9H190 292 aa17.24■□□□□ 0.35
NDE1-205ENST00000572756 ATXN3LQ9H3M9 355 aa17.24■□□□□ 0.35
NDE1-205ENST00000572756 DPEP3Q9H4B8 488 aa17.24■□□□□ 0.35
NDE1-205ENST00000572756 SLITRK6Q9H5Y7 841 aa17.24■□□□□ 0.35
NDE1-205ENST00000572756 MAN1B1Q9UKM7 699 aa17.24■□□□□ 0.35
NDE1-205ENST00000572756 KIF26AQ9ULI4 1882 aaPredicted RBP17.24■□□□□ 0.35
NDE1-205ENST00000572756 TICRRQ7Z2Z1 1910 aa17.23■□□□□ 0.35
NDE1-205ENST00000572756 CETN3O15182 167 aa17.23■□□□□ 0.35
NDE1-205ENST00000572756 KRT13P13646 458 aa17.23■□□□□ 0.35
NDE1-205ENST00000572756 PTPN1P18031 435 aaKnown RBP17.23■□□□□ 0.35
NDE1-205ENST00000572756 BMP6P22004 513 aa17.23■□□□□ 0.35
NDE1-205ENST00000572756 WEE1P30291 646 aa17.23■□□□□ 0.35
NDE1-205ENST00000572756 ANP32AP39687 249 aaKnown RBP17.23■□□□□ 0.35
NDE1-205ENST00000572756 VIPR2P41587 438 aa17.23■□□□□ 0.35
NDE1-205ENST00000572756 NUBP1P53384 320 aa17.23■□□□□ 0.35
NDE1-205ENST00000572756 CYP4F8P98187 520 aa17.23■□□□□ 0.35
NDE1-205ENST00000572756 PFKPQ01813 784 aa17.23■□□□□ 0.35
NDE1-205ENST00000572756 MDH1BQ5I0G3 518 aa17.23■□□□□ 0.35
NDE1-205ENST00000572756 GPR158Q5T848 1215 aa17.23■□□□□ 0.35
NDE1-205ENST00000572756 ANKRD40Q6AI12 368 aa17.23■□□□□ 0.35
NDE1-205ENST00000572756 PHLDB3Q6NSJ2 640 aa17.23■□□□□ 0.35
NDE1-205ENST00000572756 VSTM1Q6UX27 236 aa17.23■□□□□ 0.35
NDE1-205ENST00000572756 RSPRY1Q96DX4 576 aa17.23■□□□□ 0.35
NDE1-205ENST00000572756 TRMT2BQ96GJ1 504 aaKnown RBP17.23■□□□□ 0.35
NDE1-205ENST00000572756 MYRFLQ96LU7 910 aa17.23■□□□□ 0.35
NDE1-205ENST00000572756 PRRX2Q99811 253 aa17.23■□□□□ 0.35
NDE1-205ENST00000572756 TASP1Q9H6P5 420 aa17.23■□□□□ 0.35
NDE1-205ENST00000572756 TBC1D17Q9HA65 648 aa17.23■□□□□ 0.35
NDE1-205ENST00000572756 MAGEC2Q9UBF1 373 aaPredicted RBP17.23■□□□□ 0.35
NDE1-205ENST00000572756 MIA3Q5JRA6 1907 aa17.23■□□□□ 0.35
NDE1-205ENST00000572756 F5P12259 2224 aa17.23■□□□□ 0.35
NDE1-205ENST00000572756 SLC38A8A6NNN8 435 aa17.22■□□□□ 0.35
NDE1-205ENST00000572756 A8MXQ7 604 aa17.22■□□□□ 0.35
NDE1-205ENST00000572756 PI15O43692 258 aa17.22■□□□□ 0.35
NDE1-205ENST00000572756 TADA3O75528 432 aa17.22■□□□□ 0.35
NDE1-205ENST00000572756 CD44P16070 742 aaKnown RBP17.22■□□□□ 0.35
NDE1-205ENST00000572756 BDNFP23560 247 aa17.22■□□□□ 0.35
NDE1-205ENST00000572756 GTF2H1P32780 548 aa17.22■□□□□ 0.35
NDE1-205ENST00000572756 PLA2G5P39877 138 aa17.22■□□□□ 0.35
NDE1-205ENST00000572756 PIK3CAP42336 1068 aa17.22■□□□□ 0.35
NDE1-205ENST00000572756 RAP1GAPP47736 663 aa17.22■□□□□ 0.35
NDE1-205ENST00000572756 GCLMP48507 274 aa17.22■□□□□ 0.35
NDE1-205ENST00000572756 NLRP12P59046 1061 aa17.22■□□□□ 0.35
NDE1-205ENST00000572756 STARD6P59095 220 aa17.22■□□□□ 0.35
NDE1-205ENST00000572756 UBE2HP62256 183 aa17.22■□□□□ 0.35
NDE1-205ENST00000572756 LRRC63Q05C16 580 aa17.22■□□□□ 0.35
NDE1-205ENST00000572756 GRM2Q14416 872 aa17.22■□□□□ 0.35
NDE1-205ENST00000572756 TAF12Q16514 161 aa17.22■□□□□ 0.35
NDE1-205ENST00000572756 ARHGAP15Q53QZ3 475 aa17.22■□□□□ 0.35
NDE1-205ENST00000572756 SPOPLQ6IQ16 392 aa17.22■□□□□ 0.35
NDE1-205ENST00000572756 SCARA5Q6ZMJ2 495 aa17.22■□□□□ 0.35
NDE1-205ENST00000572756 ARID3BQ8IVW6 561 aaPredicted RBP17.22■□□□□ 0.35
NDE1-205ENST00000572756 MFSD6LQ8IWD5 586 aa17.22■□□□□ 0.35
NDE1-205ENST00000572756 B3GALNT2Q8NCR0 500 aa17.22■□□□□ 0.35
NDE1-205ENST00000572756 TAS1R2Q8TE23 839 aa17.22■□□□□ 0.35
NDE1-205ENST00000572756 DEPDC1BQ8WUY9 529 aa17.22■□□□□ 0.35
NDE1-205ENST00000572756 E2F7Q96AV8 911 aa17.22■□□□□ 0.35
NDE1-205ENST00000572756 SPATA17Q96L03 361 aa17.22■□□□□ 0.35
NDE1-205ENST00000572756 CEP295NLQ96MC4 621 aa17.22■□□□□ 0.35
NDE1-205ENST00000572756 GCNAQ96QF7 691 aa17.22■□□□□ 0.35
NDE1-205ENST00000572756 DDX23Q9BUQ8 820 aaKnown RBP17.22■□□□□ 0.35
NDE1-205ENST00000572756 TMEM8AQ9HCN3 771 aa17.22■□□□□ 0.35
NDE1-205ENST00000572756 TMEM30AQ9NV96 361 aa17.22■□□□□ 0.35
NDE1-205ENST00000572756 TRIM49BA6NDI0 452 aa17.21■□□□□ 0.35
NDE1-205ENST00000572756 HEPACAM2A8MVW5 462 aa17.21■□□□□ 0.35
NDE1-205ENST00000572756 SLC16A3O15427 465 aaKnown RBP17.21■□□□□ 0.35
NDE1-205ENST00000572756 EPB41P11171 864 aaKnown RBP17.21■□□□□ 0.35
NDE1-205ENST00000572756 P4HA1P13674 534 aa17.21■□□□□ 0.35
NDE1-205ENST00000572756 PSMC3P17980 439 aa17.21■□□□□ 0.35
NDE1-205ENST00000572756 CCNE1P24864 410 aa17.21■□□□□ 0.35
NDE1-205ENST00000572756 ASPAP45381 313 aa17.21■□□□□ 0.35
NDE1-205ENST00000572756 FKBP3Q00688 224 aaKnown RBP17.21■□□□□ 0.35
NDE1-205ENST00000572756 CYP27A1Q02318 531 aa17.21■□□□□ 0.35
NDE1-205ENST00000572756 TCF15Q12870 199 aa17.21■□□□□ 0.35
NDE1-205ENST00000572756 MORC3Q14149 939 aa17.21■□□□□ 0.35
NDE1-205ENST00000572756 MLF2Q15773 248 aaPredicted RBP17.21■□□□□ 0.35
NDE1-205ENST00000572756 SLC44A4Q53GD3 710 aa17.21■□□□□ 0.35
NDE1-205ENST00000572756 ISM2Q6H9L7 571 aa17.21■□□□□ 0.35
NDE1-205ENST00000572756 SCN4BQ8IWT1 228 aa17.21■□□□□ 0.35
NDE1-205ENST00000572756 DNASE1L2Q92874 299 aa17.21■□□□□ 0.35
NDE1-205ENST00000572756 DHTKD1Q96HY7 919 aaPredicted RBP17.21■□□□□ 0.35
NDE1-205ENST00000572756 LRRC3BQ96PB8 259 aa17.21■□□□□ 0.35
NDE1-205ENST00000572756 TSG101Q99816 390 aa17.21■□□□□ 0.35
NDE1-205ENST00000572756 TRMT61BQ9BVS5 477 aaKnown RBP17.21■□□□□ 0.35
NDE1-205ENST00000572756 SLC46A2Q9BY10 475 aa17.21■□□□□ 0.35
NDE1-205ENST00000572756 BCO2Q9BYV7 579 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms