RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 KCNK5O95279 499 aa10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 APBB3O95704 486 aa10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 ITGB3P05106 788 aa10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 USP17L7P0C7H9 530 aa10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 ACAT1P24752 427 aaKnown RBP10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 WNT7BP56706 349 aa10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 SF3A1Q15459 793 aaKnown RBP10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 ELF2Q15723 593 aa10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 ZNF77Q15935 545 aa10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 C8orf34Q49A92 452 aa10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 CFAP221Q4G0U5 840 aa10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 INTS6LQ5JSJ4 861 aaKnown RBP10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 LARP1BQ659C4 914 aaKnown RBP10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 NAIF1Q69YI7 327 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 DYMQ7RTS9 669 aa10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 BRAPQ7Z569 592 aa10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 BRSK2Q8IWQ3 736 aa10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 C1orf127Q8N9H9 656 aa10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 RPLP0P6Q8NHW5 317 aa10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 CCDC26Q8TAB7 109 aa10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 CXorf38Q8TB03 319 aa10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 SPATA18Q8TC71 538 aa10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 EZH1Q92800 747 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 ATP2A3Q93084 1043 aa10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 ACDQ96AP0 544 aa10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 ACCSQ96QU6 501 aa10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 CYP2S1Q96SQ9 504 aa10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 PKMYT1Q99640 499 aa10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 SMOC1Q9H4F8 434 aa10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 MRPL44Q9H9J2 332 aaKnown RBP10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 TRPC7Q9HCX4 862 aa10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 GDAP2Q9NXN4 497 aa10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 SEL1LQ9UBV2 794 aa10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 GTF3C4Q9UKN8 822 aa10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 SMC3Q9UQE7 1217 aa10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 TPRP12270 2363 aaKnown RBP10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 CACNA1BQ00975 2339 aa10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 TULP1O00294 542 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 DCLK1O15075 740 aa10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 LDHAP00338 332 aaKnown RBP10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 CKMP06732 381 aa10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 GAP43P17677 238 aa10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 GARTP22102 1010 aa10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 PCSK1P29120 753 aa10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 IFNAR2P48551 515 aa10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 LHX1P48742 406 aa10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 RBP5P82980 135 aa10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 KCNA1Q09470 495 aa10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 USP4Q13107 963 aa10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 NR1H3Q13133 447 aa10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 DMC1Q14565 340 aa10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 EML3Q32P44 896 aa10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 L1TD1Q5T7N2 865 aaKnown RBP10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 RNF43Q68DV7 783 aa10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 USP49Q70CQ1 688 aa10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 OSTM1Q86WC4 334 aa10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 SPATA2LQ8IUW3 424 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 CSGALNACT2Q8N6G5 542 aa10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 TOP6BLQ8N6T0 577 aa10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 FSIP1Q8NA03 581 aa10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 ZSWIM2Q8NEG5 633 aa10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 SAAL1Q96ER3 474 aa10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 FUBP3Q96I24 572 aaKnown RBP eCLIP10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 EPSTI1Q96J88 318 aa10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 SLC22A12Q96S37 553 aa10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 RBAKQ9NYW8 714 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 GCNT4Q9P109 453 aa10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 STK17AQ9UEE5 414 aa10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 CCDC39Q9UFE4 941 aa10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 ITGA11Q9UKX5 1188 aa10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 PCDHB13Q9Y5F0 798 aa10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 SNX9Q9Y5X1 595 aa10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 WNT6Q9Y6F9 365 aa10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 CHD8Q9HCK8 2581 aa10.59□□□□□ -0.71
TRAPPC1-205ENST00000572656 NUP210Q8TEM1 1887 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC1-205ENST00000572656 BCLAF3A2AJT9 711 aaKnown RBP10.58□□□□□ -0.72
TRAPPC1-205ENST00000572656 C2orf78A6NCI8 922 aa10.58□□□□□ -0.72
TRAPPC1-205ENST00000572656 MYMKA6NI61 221 aa10.58□□□□□ -0.72
TRAPPC1-205ENST00000572656 GABRDO14764 452 aa10.58□□□□□ -0.72
TRAPPC1-205ENST00000572656 CD2BP2O95400 341 aaKnown RBP10.58□□□□□ -0.72
TRAPPC1-205ENST00000572656 CAVIN2O95810 425 aa10.58□□□□□ -0.72
TRAPPC1-205ENST00000572656 TCF3P15923 654 aa10.58□□□□□ -0.72
TRAPPC1-205ENST00000572656 HDCP19113 662 aa10.58□□□□□ -0.72
TRAPPC1-205ENST00000572656 MAGEA11P43364 429 aa10.58□□□□□ -0.72
TRAPPC1-205ENST00000572656 PDE6CP51160 858 aa10.58□□□□□ -0.72
TRAPPC1-205ENST00000572656 CREB5Q02930 508 aa10.58□□□□□ -0.72
TRAPPC1-205ENST00000572656 PSMD2Q13200 908 aa10.58□□□□□ -0.72
TRAPPC1-205ENST00000572656 RRAGBQ5VZM2 374 aa10.58□□□□□ -0.72
TRAPPC1-205ENST00000572656 SCARA3Q6AZY7 606 aa10.58□□□□□ -0.72
TRAPPC1-205ENST00000572656 TCEAL6Q6IPX3 200 aa10.58□□□□□ -0.72
TRAPPC1-205ENST00000572656 FAM171BQ6P995 826 aa10.58□□□□□ -0.72
TRAPPC1-205ENST00000572656 SV2BQ7L1I2 683 aa10.58□□□□□ -0.72
TRAPPC1-205ENST00000572656 DPH6Q7L8W6 267 aa10.58□□□□□ -0.72
TRAPPC1-205ENST00000572656 C11orf74Q86VG3 221 aa10.58□□□□□ -0.72
TRAPPC1-205ENST00000572656 SCN4BQ8IWT1 228 aa10.58□□□□□ -0.72
TRAPPC1-205ENST00000572656 ADGRF2Q8IZF7 708 aa10.58□□□□□ -0.72
TRAPPC1-205ENST00000572656 ARL14EPQ8N8R7 260 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC1-205ENST00000572656 TTC16Q8NEE8 873 aa10.58□□□□□ -0.72
TRAPPC1-205ENST00000572656 SH3RF2Q8TEC5 729 aa10.58□□□□□ -0.72
TRAPPC1-205ENST00000572656 TCEAL3Q969E4 200 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms