RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 BMP8AQ7Z5Y6 402 aa9.3□□□□□ -0.92
SMG6-210ENST00000572205 USP37Q86T82 979 aa9.3□□□□□ -0.92
SMG6-210ENST00000572205 FAM186BQ8IYM0 893 aa9.3□□□□□ -0.92
SMG6-210ENST00000572205 UBR7Q8N806 425 aa9.3□□□□□ -0.92
SMG6-210ENST00000572205 GPT2Q8TD30 523 aa9.3□□□□□ -0.92
SMG6-210ENST00000572205 WHAMMQ8TF30 809 aa9.3□□□□□ -0.92
SMG6-210ENST00000572205 SLC39A7Q92504 469 aa9.3□□□□□ -0.92
SMG6-210ENST00000572205 SMARCE1Q969G3 411 aa9.3□□□□□ -0.92
SMG6-210ENST00000572205 MYLPFQ96A32 169 aa9.3□□□□□ -0.92
SMG6-210ENST00000572205 PLA2G2FQ9BZM2 168 aa9.3□□□□□ -0.92
SMG6-210ENST00000572205 CLSTN2Q9H4D0 955 aa9.3□□□□□ -0.92
SMG6-210ENST00000572205 ABCB6Q9NP58 842 aa9.3□□□□□ -0.92
SMG6-210ENST00000572205 RMND1Q9NWS8 449 aa9.3□□□□□ -0.92
SMG6-210ENST00000572205 COQ4Q9Y3A0 265 aa9.3□□□□□ -0.92
SMG6-210ENST00000572205 NUMBLQ9Y6R0 609 aa9.3□□□□□ -0.92
SMG6-210ENST00000572205 F5P12259 2224 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 TMEM221A6NGB7 291 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 M0R296 226 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 PRRG1O14668 218 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 SLC16A3O15427 465 aaKnown RBP9.29□□□□□ -0.92
SMG6-210ENST00000572205 KINO60870 393 aaKnown RBP9.29□□□□□ -0.92
SMG6-210ENST00000572205 HUS1O60921 280 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 NOL4O94818 638 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 ALADP13716 330 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 GJA1P17302 382 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 NPR3P17342 541 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 CYP2F1P24903 491 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 ATICP31939 592 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 GCLMP48507 274 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 VAMP7P51809 220 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 CDH8P55286 799 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 LRRC63Q05C16 580 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 ADAM9Q13443 819 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 MTMR3Q13615 1198 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 WDR72Q3MJ13 1102 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 CEP135Q66GS9 1140 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 ISM2Q6H9L7 571 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 ELMSAN1Q6PJG2 1045 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 INTS8Q75QN2 995 aaKnown RBP9.29□□□□□ -0.92
SMG6-210ENST00000572205 IRF2BP1Q8IU81 584 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 SPPL2BQ8TCT7 592 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 C2orf15Q8WU43 125 aaKnown RBP9.29□□□□□ -0.92
SMG6-210ENST00000572205 PCED1BQ96HM7 432 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 FUBP3Q96I24 572 aaKnown RBP eCLIP9.29□□□□□ -0.92
SMG6-210ENST00000572205 ASB16Q96NS5 453 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 LRRC3BQ96PB8 259 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 FNBP1Q96RU3 617 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 SYT15Q9BQS2 421 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 CORO1BQ9BR76 489 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 PI4K2AQ9BTU6 479 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 C1QTNF1Q9BXJ1 281 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 TRPV4Q9HBA0 871 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.29□□□□□ -0.92
SMG6-210ENST00000572205 KIAA1468Q9P260 1216 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 GTF3C4Q9UKN8 822 aa9.29□□□□□ -0.92
SMG6-210ENST00000572205 EML5Q05BV3 1969 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.28□□□□□ -0.92
SMG6-210ENST00000572205 KRBA1A5PL33 1030 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 BIN1O00499 593 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 PRAMEF12O95522 483 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 LRG1P02750 347 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 F11P03951 625 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 FAM163BP0C2L3 166 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 COL9A1P20849 921 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 GBP2P32456 591 aaPredicted RBP9.28□□□□□ -0.92
SMG6-210ENST00000572205 PSMC2P35998 433 aaKnown RBP9.28□□□□□ -0.92
SMG6-210ENST00000572205 MAGEA11P43364 429 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 LHX1P48742 406 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 AP3M2P53677 418 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 VCPP55072 806 aaKnown RBP9.28□□□□□ -0.92
SMG6-210ENST00000572205 MARSP56192 900 aaKnown RBP9.28□□□□□ -0.92
SMG6-210ENST00000572205 USP46P62068 366 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 NOP14P78316 857 aaKnown RBP9.28□□□□□ -0.92
SMG6-210ENST00000572205 MYO1EQ12965 1108 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 TDGQ13569 410 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 TEAD2Q15562 447 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 ZNF699Q32M78 642 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 WDR44Q5JSH3 913 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 FAM78AQ5JUQ0 283 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 TMEM31Q5JXX7 168 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 SDHAF4Q5VUM1 108 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 SCARA5Q6ZMJ2 495 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 DNAJB7Q7Z6W7 309 aaPredicted RBP9.28□□□□□ -0.92
SMG6-210ENST00000572205 ZNF687Q8N1G0 1237 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 SLC44A3Q8N4M1 653 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 ZMIZ2Q8NF64 920 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 LMO3Q8TAP4 145 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 MYCBPAPQ8TBZ2 947 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 GPR152Q8TDT2 470 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 SYAP1Q96A49 352 aaPredicted RBP9.28□□□□□ -0.92
SMG6-210ENST00000572205 PBXIP1Q96AQ6 731 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 ACSF2Q96CM8 615 aaPredicted RBP9.28□□□□□ -0.92
SMG6-210ENST00000572205 CHFRQ96EP1 664 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 TRMT2BQ96GJ1 504 aaKnown RBP9.28□□□□□ -0.92
SMG6-210ENST00000572205 MYRFLQ96LU7 910 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 IPO9Q96P70 1041 aaKnown RBP9.28□□□□□ -0.92
SMG6-210ENST00000572205 PIDD1Q9HB75 910 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 TMEM8AQ9HCN3 771 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 SLC2A4RGQ9NR83 387 aa9.28□□□□□ -0.92
SMG6-210ENST00000572205 ABI2Q9NYB9 513 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms