RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 CDH7Q9ULB5 785 aa17.23■□□□□ 0.35
LITAF-210ENST00000571976 NFE2L3Q9Y4A8 694 aa17.23■□□□□ 0.35
LITAF-210ENST00000571976 NCOR1O75376 2440 aa17.23■□□□□ 0.35
LITAF-210ENST00000571976 CILPO75339 1184 aa17.22■□□□□ 0.35
LITAF-210ENST00000571976 FGF19O95750 216 aa17.22■□□□□ 0.35
LITAF-210ENST00000571976 LAMP2P13473 410 aa17.22■□□□□ 0.35
LITAF-210ENST00000571976 CD58P19256 250 aa17.22■□□□□ 0.35
LITAF-210ENST00000571976 BDNFP23560 247 aa17.22■□□□□ 0.35
LITAF-210ENST00000571976 TBXAS1P24557 533 aaPredicted RBP17.22■□□□□ 0.35
LITAF-210ENST00000571976 TYRO3Q06418 890 aa17.22■□□□□ 0.35
LITAF-210ENST00000571976 TAF12Q16514 161 aa17.22■□□□□ 0.35
LITAF-210ENST00000571976 DDR2Q16832 855 aa17.22■□□□□ 0.35
LITAF-210ENST00000571976 SKOR2Q2VWA4 1001 aaPredicted RBP17.22■□□□□ 0.35
LITAF-210ENST00000571976 PRSS36Q5K4E3 855 aa17.22■□□□□ 0.35
LITAF-210ENST00000571976 C11orf57Q6ZUT1 292 aaPredicted RBP17.22■□□□□ 0.35
LITAF-210ENST00000571976 HS6ST3Q8IZP7 471 aa17.22■□□□□ 0.35
LITAF-210ENST00000571976 EHBP1Q8NDI1 1231 aa17.22■□□□□ 0.35
LITAF-210ENST00000571976 LMO3Q8TAP4 145 aa17.22■□□□□ 0.35
LITAF-210ENST00000571976 GIPC2Q8TF65 315 aa17.22■□□□□ 0.35
LITAF-210ENST00000571976 FGF13Q92913 245 aa17.22■□□□□ 0.35
LITAF-210ENST00000571976 CEP295NLQ96MC4 621 aa17.22■□□□□ 0.35
LITAF-210ENST00000571976 LPIN3Q9BQK8 851 aa17.22■□□□□ 0.35
LITAF-210ENST00000571976 NT5C1AQ9BXI3 368 aa17.22■□□□□ 0.35
LITAF-210ENST00000571976 LRRC3Q9BY71 257 aa17.22■□□□□ 0.35
LITAF-210ENST00000571976 B3GNT5Q9BYG0 378 aa17.22■□□□□ 0.35
LITAF-210ENST00000571976 ELOVL4Q9GZR5 314 aa17.22■□□□□ 0.35
LITAF-210ENST00000571976 CISHQ9NSE2 258 aa17.22■□□□□ 0.35
LITAF-210ENST00000571976 SAMSN1Q9NSI8 373 aaKnown RBP17.22■□□□□ 0.35
LITAF-210ENST00000571976 ATP8B3O60423 1300 aa17.21■□□□□ 0.35
LITAF-210ENST00000571976 MUC3AQ02505 3323 aa17.21■□□□□ 0.35
LITAF-210ENST00000571976 MYL4P12829 197 aa17.21■□□□□ 0.35
LITAF-210ENST00000571976 YWHAEP62258 255 aaKnown RBP17.21■□□□□ 0.35
LITAF-210ENST00000571976 LRMPQ12912 555 aa17.21■□□□□ 0.35
LITAF-210ENST00000571976 CUL2Q13617 745 aa17.21■□□□□ 0.35
LITAF-210ENST00000571976 MAN2A1Q16706 1144 aa17.21■□□□□ 0.35
LITAF-210ENST00000571976 SLC5A9Q2M3M2 681 aa17.21■□□□□ 0.35
LITAF-210ENST00000571976 TMC8Q8IU68 726 aa17.21■□□□□ 0.35
LITAF-210ENST00000571976 SCN4BQ8IWT1 228 aa17.21■□□□□ 0.35
LITAF-210ENST00000571976 GPR152Q8TDT2 470 aa17.21■□□□□ 0.35
LITAF-210ENST00000571976 WHAMMQ8TF30 809 aa17.21■□□□□ 0.35
LITAF-210ENST00000571976 NT5C1BQ96P26 610 aa17.21■□□□□ 0.35
LITAF-210ENST00000571976 NAT10Q9H0A0 1025 aaKnown RBP17.21■□□□□ 0.35
LITAF-210ENST00000571976 LIMD1Q9UGP4 676 aa17.21■□□□□ 0.35
LITAF-210ENST00000571976 HMGXB4Q9UGU5 601 aa17.21■□□□□ 0.35
LITAF-210ENST00000571976 DOCK6Q96HP0 2047 aa17.21■□□□□ 0.35
LITAF-210ENST00000571976 NOTCH4Q99466 2003 aa17.2■□□□□ 0.34
LITAF-210ENST00000571976 KCNJ18B7U540 433 aa17.2■□□□□ 0.34
LITAF-210ENST00000571976 TRIM66O15016 1216 aa17.2■□□□□ 0.34
LITAF-210ENST00000571976 CSH1P0DML2 217 aa17.2■□□□□ 0.34
LITAF-210ENST00000571976 CSH2P0DML3 217 aa17.2■□□□□ 0.34
LITAF-210ENST00000571976 EEF1GP26641 437 aaKnown RBP17.2■□□□□ 0.34
LITAF-210ENST00000571976 GRIK1P39086 918 aa17.2■□□□□ 0.34
LITAF-210ENST00000571976 CCR2P41597 374 aa17.2■□□□□ 0.34
LITAF-210ENST00000571976 GPR15P49685 360 aa17.2■□□□□ 0.34
LITAF-210ENST00000571976 ORC1Q13415 861 aa17.2■□□□□ 0.34
LITAF-210ENST00000571976 KCNJ12Q14500 433 aa17.2■□□□□ 0.34
LITAF-210ENST00000571976 NPAS3Q8IXF0 933 aa17.2■□□□□ 0.34
LITAF-210ENST00000571976 ING5Q8WYH8 240 aa17.2■□□□□ 0.34
LITAF-210ENST00000571976 TCEAL4Q96EI5 215 aa17.2■□□□□ 0.34
LITAF-210ENST00000571976 SPATA17Q96L03 361 aa17.2■□□□□ 0.34
LITAF-210ENST00000571976 TWNKQ96RR1 684 aa17.2■□□□□ 0.34
LITAF-210ENST00000571976 ARID3AQ99856 593 aa17.2■□□□□ 0.34
LITAF-210ENST00000571976 TUBGCP2Q9BSJ2 902 aa17.2■□□□□ 0.34
LITAF-210ENST00000571976 MED10Q9BTT4 135 aa17.2■□□□□ 0.34
LITAF-210ENST00000571976 GDE1Q9NZC3 331 aa17.2■□□□□ 0.34
LITAF-210ENST00000571976 GTPBP10A4D1E9 387 aaKnown RBP17.19■□□□□ 0.34
LITAF-210ENST00000571976 CLDN5O00501 218 aa17.19■□□□□ 0.34
LITAF-210ENST00000571976 PRKCSHP14314 528 aaPredicted RBP17.19■□□□□ 0.34
LITAF-210ENST00000571976 HMGA1P17096 107 aaKnown RBP17.19■□□□□ 0.34
LITAF-210ENST00000571976 ANXA13P27216 316 aa17.19■□□□□ 0.34
LITAF-210ENST00000571976 MYL5Q02045 173 aa17.19■□□□□ 0.34
LITAF-210ENST00000571976 VWA3BQ502W6 1294 aa17.19■□□□□ 0.34
LITAF-210ENST00000571976 HSP90AA4PQ58FG1 418 aa17.19■□□□□ 0.34
LITAF-210ENST00000571976 TCP11X2Q5H9J9 407 aa17.19■□□□□ 0.34
LITAF-210ENST00000571976 SDHAF4Q5VUM1 108 aa17.19■□□□□ 0.34
LITAF-210ENST00000571976 GBP6Q6ZN66 633 aa17.19■□□□□ 0.34
LITAF-210ENST00000571976 FUKQ8N0W3 1084 aa17.19■□□□□ 0.34
LITAF-210ENST00000571976 PPM1KQ8N3J5 372 aa17.19■□□□□ 0.34
LITAF-210ENST00000571976 C12orf29Q8N999 325 aa17.19■□□□□ 0.34
LITAF-210ENST00000571976 NXPE3Q969Y0 559 aa17.19■□□□□ 0.34
LITAF-210ENST00000571976 C8orf48Q96LL4 319 aa17.19■□□□□ 0.34
LITAF-210ENST00000571976 ZNF518BQ9C0D4 1074 aa17.19■□□□□ 0.34
LITAF-210ENST00000571976 GPR88Q9GZN0 384 aa17.19■□□□□ 0.34
LITAF-210ENST00000571976 INTS2Q9H0H0 1204 aaKnown RBP17.19■□□□□ 0.34
LITAF-210ENST00000571976 NDST4Q9H3R1 872 aa17.19■□□□□ 0.34
LITAF-210ENST00000571976 ZNF334Q9HCZ1 680 aaPredicted RBP17.19■□□□□ 0.34
LITAF-210ENST00000571976 GCNT4Q9P109 453 aa17.19■□□□□ 0.34
LITAF-210ENST00000571976 IGSF9Q9P2J2 1179 aa17.19■□□□□ 0.34
LITAF-210ENST00000571976 SLC38A8A6NNN8 435 aa17.18■□□□□ 0.34
LITAF-210ENST00000571976 MOSPD3O75425 235 aa17.18■□□□□ 0.34
LITAF-210ENST00000571976 NOL4O94818 638 aa17.18■□□□□ 0.34
LITAF-210ENST00000571976 ALADP13716 330 aa17.18■□□□□ 0.34
LITAF-210ENST00000571976 CEBPBP17676 345 aa17.18■□□□□ 0.34
LITAF-210ENST00000571976 GABRR2P28476 465 aa17.18■□□□□ 0.34
LITAF-210ENST00000571976 CDC25CP30307 473 aa17.18■□□□□ 0.34
LITAF-210ENST00000571976 GCNT1Q02742 428 aa17.18■□□□□ 0.34
LITAF-210ENST00000571976 PTPN21Q16825 1174 aa17.18■□□□□ 0.34
LITAF-210ENST00000571976 ZNF394Q53GI3 561 aa17.18■□□□□ 0.34
LITAF-210ENST00000571976 CDKAL1Q5VV42 579 aa17.18■□□□□ 0.34
LITAF-210ENST00000571976 PAQR9Q6ZVX9 377 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms